RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 GPNMBQ14956 572 aa23.14■■□□□ 1.29
CIRBP-239ENST00000592467 NAP1L2Q9ULW6 460 aaPredicted RBP23.14■■□□□ 1.29
CIRBP-239ENST00000592467 CHD9Q3L8U1 2897 aa23.14■■□□□ 1.29
CIRBP-239ENST00000592467 CCDC196A0A1B0GTZ2 297 aa23.13■■□□□ 1.29
CIRBP-239ENST00000592467 SMCO2A6NFE2 343 aa23.13■■□□□ 1.29
CIRBP-239ENST00000592467 SPDYE3A6NKU9 549 aa23.13■■□□□ 1.29
CIRBP-239ENST00000592467 PRPF3O43395 683 aaKnown RBP23.13■■□□□ 1.29
CIRBP-239ENST00000592467 FGBP02675 491 aa23.13■■□□□ 1.29
CIRBP-239ENST00000592467 LGALS2P05162 132 aa23.13■■□□□ 1.29
CIRBP-239ENST00000592467 CENPBP07199 599 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-239ENST00000592467 SCG2P13521 617 aa23.13■■□□□ 1.29
CIRBP-239ENST00000592467 ADCY7P51828 1080 aa23.13■■□□□ 1.29
CIRBP-239ENST00000592467 TRIM71Q2Q1W2 868 aaKnown RBP23.13■■□□□ 1.29
CIRBP-239ENST00000592467 NLRX1Q86UT6 975 aa23.13■■□□□ 1.29
CIRBP-239ENST00000592467 WNT8BQ93098 351 aa23.13■■□□□ 1.29
CIRBP-239ENST00000592467 PGBD1Q96JS3 809 aa23.13■■□□□ 1.29
CIRBP-239ENST00000592467 JADE2Q9NQC1 790 aa23.13■■□□□ 1.29
CIRBP-239ENST00000592467 TMEM260Q9NX78 707 aa23.13■■□□□ 1.29
CIRBP-239ENST00000592467 GRXCR1A8MXD5 290 aa23.12■■□□□ 1.29
CIRBP-239ENST00000592467 ZNF200P98182 395 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-239ENST00000592467 C7orf31Q8N865 590 aa23.12■■□□□ 1.29
CIRBP-239ENST00000592467 SEMA6BQ9H3T3 888 aa23.12■■□□□ 1.29
CIRBP-239ENST00000592467 H3BRB1 525 aa23.11■■□□□ 1.29
CIRBP-239ENST00000592467 ZNF697Q5TEC3 545 aa23.11■■□□□ 1.29
CIRBP-239ENST00000592467 TRAF7Q6Q0C0 670 aa23.11■■□□□ 1.29
CIRBP-239ENST00000592467 OTOP2Q7RTS6 562 aa23.11■■□□□ 1.29
CIRBP-239ENST00000592467 RPUSD2Q8IZ73 545 aaKnown RBP23.11■■□□□ 1.29
CIRBP-239ENST00000592467 CYP2W1Q8TAV3 490 aa23.11■■□□□ 1.29
CIRBP-239ENST00000592467 CAGE1Q8TC20 777 aa23.11■■□□□ 1.29
CIRBP-239ENST00000592467 PHKBQ93100 1093 aa23.11■■□□□ 1.29
CIRBP-239ENST00000592467 FAM161BQ96MY7 647 aa23.11■■□□□ 1.29
CIRBP-239ENST00000592467 ANO3Q9BYT9 981 aa23.11■■□□□ 1.29
CIRBP-239ENST00000592467 UPF3BQ9BZI7 483 aaKnown RBP23.11■■□□□ 1.29
CIRBP-239ENST00000592467 TUT1Q9H6E5 874 aaKnown RBP23.11■■□□□ 1.29
CIRBP-239ENST00000592467 NCOA5Q9HCD5 579 aaKnown RBP23.11■■□□□ 1.29
CIRBP-239ENST00000592467 ESYT2A0FGR8 921 aa23.1■■□□□ 1.29
CIRBP-239ENST00000592467 RBAK-RBAKDNI3L0D1 243 aa23.1■■□□□ 1.29
CIRBP-239ENST00000592467 FOSP01100 380 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-239ENST00000592467 PFKMP08237 780 aa23.1■■□□□ 1.29
CIRBP-239ENST00000592467 IFNAR1P17181 557 aa23.1■■□□□ 1.29
CIRBP-239ENST00000592467 RFC2P35250 354 aa23.1■■□□□ 1.29
CIRBP-239ENST00000592467 BFSP2Q13515 415 aa23.1■■□□□ 1.29
CIRBP-239ENST00000592467 MTMR1Q13613 665 aa23.1■■□□□ 1.29
CIRBP-239ENST00000592467 TRIM50Q86XT4 487 aa23.1■■□□□ 1.29
CIRBP-239ENST00000592467 CRYGNQ8WXF5 182 aa23.1■■□□□ 1.29
CIRBP-239ENST00000592467 MXRA8Q9BRK3 442 aa23.1■■□□□ 1.29
CIRBP-239ENST00000592467 ZMYND12Q9H0C1 365 aa23.1■■□□□ 1.29
CIRBP-239ENST00000592467 NOD1Q9Y239 953 aa23.1■■□□□ 1.29
CIRBP-239ENST00000592467 STXBP5LQ9Y2K9 1186 aa23.1■■□□□ 1.29
CIRBP-239ENST00000592467 CYP46A1Q9Y6A2 500 aa23.1■■□□□ 1.29
CIRBP-239ENST00000592467 PTPRSQ13332 1948 aa23.1■■□□□ 1.29
CIRBP-239ENST00000592467 EYSQ5T1H1 3165 aa23.09■■□□□ 1.29
CIRBP-239ENST00000592467 GSTTP1A0A1W2PQM5 241 aa23.09■■□□□ 1.29
CIRBP-239ENST00000592467 NOP56O00567 594 aaKnown RBP23.09■■□□□ 1.29
CIRBP-239ENST00000592467 DNAJB2P25686 324 aa23.09■■□□□ 1.29
CIRBP-239ENST00000592467 SREBF1P36956 1147 aa23.09■■□□□ 1.29
CIRBP-239ENST00000592467 PBX2P40425 430 aa23.09■■□□□ 1.29
CIRBP-239ENST00000592467 CCT2P78371 535 aaKnown RBP23.09■■□□□ 1.29
CIRBP-239ENST00000592467 PTK7Q13308 1070 aa23.09■■□□□ 1.29
CIRBP-239ENST00000592467 AP3B2Q13367 1082 aa23.09■■□□□ 1.29
CIRBP-239ENST00000592467 DEFB128Q7Z7B8 93 aa23.09■■□□□ 1.29
CIRBP-239ENST00000592467 GIMAP8Q8ND71 665 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-239ENST00000592467 AFAP1L1Q8TED9 768 aa23.09■■□□□ 1.29
CIRBP-239ENST00000592467 CDHR1Q96JP9 859 aa23.09■■□□□ 1.29
CIRBP-239ENST00000592467 RNF26Q9BY78 433 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-239ENST00000592467 PBX4Q9BYU1 374 aa23.09■■□□□ 1.29
CIRBP-239ENST00000592467 TMEM265A0A087WTH1 108 aa23.08■■□□□ 1.29
CIRBP-239ENST00000592467 MAFGO15525 162 aa23.08■■□□□ 1.29
CIRBP-239ENST00000592467 PPFIA3O75145 1194 aa23.08■■□□□ 1.29
CIRBP-239ENST00000592467 SMIM10L2AP0DMW4 78 aa23.08■■□□□ 1.29
CIRBP-239ENST00000592467 SMIM10L2BP0DMW5 78 aa23.08■■□□□ 1.29
CIRBP-239ENST00000592467 CKBP12277 381 aa23.08■■□□□ 1.29
CIRBP-239ENST00000592467 RETREG2Q8NC44 543 aa23.08■■□□□ 1.29
CIRBP-239ENST00000592467 IL17RAQ96F46 866 aa23.08■■□□□ 1.29
CIRBP-239ENST00000592467 ZNF274Q96GC6 653 aaPredicted RBP23.08■■□□□ 1.29
CIRBP-239ENST00000592467 LARP6Q9BRS8 491 aaKnown RBP23.08■■□□□ 1.29
CIRBP-239ENST00000592467 GLT8D2Q9H1C3 349 aa23.08■■□□□ 1.29
CIRBP-239ENST00000592467 EHMT1Q9H9B1 1298 aa23.08■■□□□ 1.29
CIRBP-239ENST00000592467 ADAM17P78536 824 aa23.07■■□□□ 1.28
CIRBP-239ENST00000592467 SERINC5Q86VE9 423 aa23.07■■□□□ 1.28
CIRBP-239ENST00000592467 RNPEPQ9H4A4 650 aa23.07■■□□□ 1.28
CIRBP-239ENST00000592467 KCNH7Q9NS40 1196 aa23.07■■□□□ 1.28
CIRBP-239ENST00000592467 CHD7Q9P2D1 2997 aa23.07■■□□□ 1.28
CIRBP-239ENST00000592467 MEIS1O00470 390 aa23.06■■□□□ 1.28
CIRBP-239ENST00000592467 ARP10275 920 aa23.06■■□□□ 1.28
CIRBP-239ENST00000592467 SELPP16109 830 aa23.06■■□□□ 1.28
CIRBP-239ENST00000592467 TCF7P36402 384 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-239ENST00000592467 SP4Q02446 784 aa23.06■■□□□ 1.28
CIRBP-239ENST00000592467 TCTN1Q2MV58 587 aa23.06■■□□□ 1.28
CIRBP-239ENST00000592467 JAKMIP3Q5VZ66 844 aa23.06■■□□□ 1.28
CIRBP-239ENST00000592467 LRRC8DQ7L1W4 858 aa23.06■■□□□ 1.28
CIRBP-239ENST00000592467 CCDC155Q8N6L0 562 aa23.06■■□□□ 1.28
CIRBP-239ENST00000592467 CDX2Q99626 313 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-239ENST00000592467 SLC26A6Q9BXS9 759 aa23.06■■□□□ 1.28
CIRBP-239ENST00000592467 PKD2L1Q9P0L9 805 aa23.06■■□□□ 1.28
CIRBP-239ENST00000592467 NBNO60934 754 aa23.05■■□□□ 1.28
CIRBP-239ENST00000592467 CXCL10P02778 98 aa23.05■■□□□ 1.28
CIRBP-239ENST00000592467 ARHGAP4P98171 946 aa23.05■■□□□ 1.28
CIRBP-239ENST00000592467 ITGB3BPQ13352 177 aaPredicted RBP23.05■■□□□ 1.28
CIRBP-239ENST00000592467 MBTPS1Q14703 1052 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms