RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 STK36Q9NRP7 1315 aa16.57■□□□□ 0.24
DDX39A-217ENST00000592391 HAS3O00219 553 aa16.57■□□□□ 0.24
DDX39A-217ENST00000592391 FXR1P51114 621 aaKnown RBP eCLIP16.57■□□□□ 0.24
DDX39A-217ENST00000592391 NLRP5P59047 1200 aa16.57■□□□□ 0.24
DDX39A-217ENST00000592391 FPGSQ05932 587 aa16.57■□□□□ 0.24
DDX39A-217ENST00000592391 MFSD10Q14728 455 aa16.57■□□□□ 0.24
DDX39A-217ENST00000592391 CYP2W1Q8TAV3 490 aa16.57■□□□□ 0.24
DDX39A-217ENST00000592391 GPR20Q99678 358 aa16.57■□□□□ 0.24
DDX39A-217ENST00000592391 C16orf70Q9BSU1 422 aa16.57■□□□□ 0.24
DDX39A-217ENST00000592391 NOC4LQ9BVI4 516 aaKnown RBP16.57■□□□□ 0.24
DDX39A-217ENST00000592391 C22orf23Q9BZE7 217 aa16.57■□□□□ 0.24
DDX39A-217ENST00000592391 PPP1R12CQ9BZL4 782 aa16.57■□□□□ 0.24
DDX39A-217ENST00000592391 HIPK3Q9H422 1215 aa16.57■□□□□ 0.24
DDX39A-217ENST00000592391 KCNH7Q9NS40 1196 aa16.57■□□□□ 0.24
DDX39A-217ENST00000592391 MYH7BA7E2Y1 1941 aa16.57■□□□□ 0.24
DDX39A-217ENST00000592391 MEIS1O00470 390 aa16.56■□□□□ 0.24
DDX39A-217ENST00000592391 LARGE1O95461 756 aa16.56■□□□□ 0.24
DDX39A-217ENST00000592391 CTDNEP1O95476 244 aa16.56■□□□□ 0.24
DDX39A-217ENST00000592391 CYP3A4P08684 503 aa16.56■□□□□ 0.24
DDX39A-217ENST00000592391 ZNF76P36508 570 aa16.56■□□□□ 0.24
DDX39A-217ENST00000592391 RBM25P49756 843 aaKnown RBP16.56■□□□□ 0.24
DDX39A-217ENST00000592391 KIAA0753Q2KHM9 967 aa16.56■□□□□ 0.24
DDX39A-217ENST00000592391 NIPA1Q7RTP0 329 aa16.56■□□□□ 0.24
DDX39A-217ENST00000592391 NECAB1Q8N987 351 aa16.56■□□□□ 0.24
DDX39A-217ENST00000592391 RASGRP4Q8TDF6 673 aa16.56■□□□□ 0.24
DDX39A-217ENST00000592391 GTF3C6Q969F1 213 aa16.56■□□□□ 0.24
DDX39A-217ENST00000592391 AIFM3Q96NN9 605 aa16.56■□□□□ 0.24
DDX39A-217ENST00000592391 KIF2CQ99661 725 aa16.56■□□□□ 0.24
DDX39A-217ENST00000592391 LAMA3Q16787 3333 aa16.55■□□□□ 0.24
DDX39A-217ENST00000592391 LGALS2P05162 132 aa16.55■□□□□ 0.24
DDX39A-217ENST00000592391 CYP2C9P11712 490 aa16.55■□□□□ 0.24
DDX39A-217ENST00000592391 CYP2C18P33260 490 aa16.55■□□□□ 0.24
DDX39A-217ENST00000592391 SP4Q02446 784 aa16.55■□□□□ 0.24
DDX39A-217ENST00000592391 TMEM199Q8N511 208 aa16.55■□□□□ 0.24
DDX39A-217ENST00000592391 C7orf31Q8N865 590 aa16.55■□□□□ 0.24
DDX39A-217ENST00000592391 ALG1Q9BT22 464 aa16.55■□□□□ 0.24
DDX39A-217ENST00000592391 PKD2L1Q9P0L9 805 aa16.55■□□□□ 0.24
DDX39A-217ENST00000592391 HDAC6Q9UBN7 1215 aa16.55■□□□□ 0.24
DDX39A-217ENST00000592391 GTF2IRD1Q9UHL9 959 aa16.55■□□□□ 0.24
DDX39A-217ENST00000592391 PCDHA4Q9UN74 947 aa16.55■□□□□ 0.24
DDX39A-217ENST00000592391 NOD1Q9Y239 953 aa16.55■□□□□ 0.24
DDX39A-217ENST00000592391 TELO2Q9Y4R8 837 aa16.55■□□□□ 0.24
DDX39A-217ENST00000592391 NFASCO94856 1347 aa16.54■□□□□ 0.24
DDX39A-217ENST00000592391 UMODL1Q5DID0 1318 aa16.54■□□□□ 0.24
DDX39A-217ENST00000592391 FAM86B1E9PN63 330 aa16.54■□□□□ 0.24
DDX39A-217ENST00000592391 H3BRB1 525 aa16.54■□□□□ 0.24
DDX39A-217ENST00000592391 FAM86B2P0C5J1 330 aa16.54■□□□□ 0.24
DDX39A-217ENST00000592391 ARP10275 920 aa16.54■□□□□ 0.24
DDX39A-217ENST00000592391 EPHB4P54760 987 aa16.54■□□□□ 0.24
DDX39A-217ENST00000592391 PPIGQ13427 754 aaKnown RBP eCLIP16.54■□□□□ 0.243e-7■■□□□ 12.7
DDX39A-217ENST00000592391 SHHQ15465 462 aa16.54■□□□□ 0.24
DDX39A-217ENST00000592391 PTGISQ16647 500 aa16.54■□□□□ 0.24
DDX39A-217ENST00000592391 LRIT3Q3SXY7 679 aa16.54■□□□□ 0.24
DDX39A-217ENST00000592391 C9orf50Q5SZB4 431 aa16.54■□□□□ 0.24
DDX39A-217ENST00000592391 GALNT17Q6IS24 598 aa16.54■□□□□ 0.24
DDX39A-217ENST00000592391 GDF6Q6KF10 455 aaPredicted RBP16.54■□□□□ 0.24
DDX39A-217ENST00000592391 DAGLBQ8NCG7 672 aa16.54■□□□□ 0.24
DDX39A-217ENST00000592391 TUT1Q9H6E5 874 aaKnown RBP16.54■□□□□ 0.24
DDX39A-217ENST00000592391 AGO4Q9HCK5 861 aaKnown RBP16.54■□□□□ 0.24
DDX39A-217ENST00000592391 JPH1Q9HDC5 661 aaPredicted RBP16.54■□□□□ 0.24
DDX39A-217ENST00000592391 IGLV3-22A0A075B6J6 115 aa16.53■□□□□ 0.24
DDX39A-217ENST00000592391 CSF2RAP15509 400 aa16.53■□□□□ 0.24
DDX39A-217ENST00000592391 XBP1P17861 261 aa16.53■□□□□ 0.24
DDX39A-217ENST00000592391 TCF7P36402 384 aaPredicted RBP16.53■□□□□ 0.24
DDX39A-217ENST00000592391 NPY5RQ15761 445 aa16.53■□□□□ 0.24
DDX39A-217ENST00000592391 PLA2G4DQ86XP0 818 aa16.53■□□□□ 0.24
DDX39A-217ENST00000592391 BLIDQ8IZY5 108 aa16.53■□□□□ 0.24
DDX39A-217ENST00000592391 SEPT1Q8WYJ6 367 aa16.53■□□□□ 0.24
DDX39A-217ENST00000592391 WASF1Q92558 559 aa16.53■□□□□ 0.24
DDX39A-217ENST00000592391 CTAGE1Q96RT6 745 aa16.53■□□□□ 0.24
DDX39A-217ENST00000592391 SDF4Q9BRK5 362 aa16.53■□□□□ 0.24
DDX39A-217ENST00000592391 WNT8AQ9H1J5 351 aa16.53■□□□□ 0.24
DDX39A-217ENST00000592391 UPF2Q9HAU5 1272 aaKnown RBP16.53■□□□□ 0.24
DDX39A-217ENST00000592391 ORC3Q9UBD5 711 aaPredicted RBP16.53■□□□□ 0.24
DDX39A-217ENST00000592391 ZNF215Q9UL58 517 aaPredicted RBP16.53■□□□□ 0.24
DDX39A-217ENST00000592391 LIMCH1Q9UPQ0 1083 aa16.53■□□□□ 0.24
DDX39A-217ENST00000592391 DOCK5Q9H7D0 1870 aa16.52■□□□□ 0.24
DDX39A-217ENST00000592391 GSTTP1A0A1W2PQM5 241 aa16.52■□□□□ 0.24
DDX39A-217ENST00000592391 M0R2N6 131 aa16.52■□□□□ 0.24
DDX39A-217ENST00000592391 PITPNM1O00562 1244 aa16.52■□□□□ 0.24
DDX39A-217ENST00000592391 DTNBO60941 627 aa16.52■□□□□ 0.24
DDX39A-217ENST00000592391 CIITAP33076 1130 aa16.52■□□□□ 0.24
DDX39A-217ENST00000592391 CCL23P55773 120 aa16.52■□□□□ 0.24
DDX39A-217ENST00000592391 SETQ01105 290 aaPredicted RBP16.52■□□□□ 0.24
DDX39A-217ENST00000592391 ITGB3BPQ13352 177 aaPredicted RBP16.52■□□□□ 0.24
DDX39A-217ENST00000592391 UTP14CQ5TAP6 766 aaKnown RBP16.52■□□□□ 0.24
DDX39A-217ENST00000592391 TRIM50Q86XT4 487 aa16.52■□□□□ 0.24
DDX39A-217ENST00000592391 NSUN7Q8NE18 718 aaKnown RBP16.52■□□□□ 0.24
DDX39A-217ENST00000592391 PHF20Q9BVI0 1012 aa16.52■□□□□ 0.24
DDX39A-217ENST00000592391 SLC9A2Q9UBY0 812 aa16.52■□□□□ 0.24
DDX39A-217ENST00000592391 KCNJ14Q9UNX9 436 aa16.52■□□□□ 0.24
DDX39A-217ENST00000592391 SOX1O00570 391 aaPredicted RBP16.51■□□□□ 0.23
DDX39A-217ENST00000592391 FDPSP14324 419 aaKnown RBP16.51■□□□□ 0.23
DDX39A-217ENST00000592391 USP11P51784 963 aa16.51■□□□□ 0.23
DDX39A-217ENST00000592391 BFSP2Q13515 415 aa16.51■□□□□ 0.23
DDX39A-217ENST00000592391 C16orf59Q7L2K0 433 aa16.51■□□□□ 0.23
DDX39A-217ENST00000592391 IL23AQ9NPF7 189 aa16.51■□□□□ 0.23
DDX39A-217ENST00000592391 IPO5O00410 1097 aaKnown RBP16.5■□□□□ 0.23
DDX39A-217ENST00000592391 EDIL3O43854 480 aa16.5■□□□□ 0.23
DDX39A-217ENST00000592391 SMIM10L2AP0DMW4 78 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms