RNA–Protein interactions for RNA: ENST00000592242.1

PPP6R1-208, Transcript of protein phosphatase 6 regulatory subunit 1, human

TSL 4

Gene PPP6R1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP6R1-208	ENST00000592242	CNTNAP3B	Q96NU0	1288 aa		13.58	□□□□□ -0.24
PPP6R1-208	ENST00000592242	CNTNAP3	Q9BZ76	1288 aa		13.58	□□□□□ -0.24
PPP6R1-208	ENST00000592242	MAF1	Q9H063	256 aa		13.58	□□□□□ -0.24
PPP6R1-208	ENST00000592242	RALGAPA2	Q2PPJ7	1873 aa		13.58	□□□□□ -0.24
PPP6R1-208	ENST00000592242	WDR19	Q8NEZ3	1342 aa		13.58	□□□□□ -0.24
PPP6R1-208	ENST00000592242	ATG2A	Q2TAZ0	1938 aa		13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	ZFHX4	Q86UP3	3567 aa		13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	GPAA1	O43292	621 aa		13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	CSPG5	O95196	566 aa		13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	ITGB1	P05556	798 aa		13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	BTG3	Q14201	252 aa	Predicted RBP	13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	CCDC96	Q2M329	555 aa		13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	FAM26D	Q5JW98	314 aa		13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	ASTL	Q6HA08	431 aa	Predicted RBP	13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	ITPRIP	Q8IWB1	547 aa		13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	UBALD2	Q8IYN6	164 aa		13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	KREMEN2	Q8NCW0	462 aa		13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	ATP8B4	Q8TF62	1192 aa		13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	APPBP2	Q92624	585 aa		13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	ATP6V0A1	Q93050	837 aa		13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	IWS1	Q96ST2	819 aa		13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	PCDHGC5	Q9Y5F6	944 aa		13.57	□□□□□ -0.24
PPP6R1-208	ENST00000592242	C17orf102	A2RUQ5	167 aa		13.56	□□□□□ -0.24
PPP6R1-208	ENST00000592242	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.56	□□□□□ -0.24
PPP6R1-208	ENST00000592242	TREH	O43280	583 aa		13.56	□□□□□ -0.24
PPP6R1-208	ENST00000592242	NMT2	O60551	498 aa		13.56	□□□□□ -0.24
PPP6R1-208	ENST00000592242	SLC3A2	P08195	630 aa	Known RBP	13.56	□□□□□ -0.24
PPP6R1-208	ENST00000592242	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
PPP6R1-208	ENST00000592242	STXBP2	Q15833	593 aa		13.56	□□□□□ -0.24
PPP6R1-208	ENST00000592242	RBM23	Q86U06	439 aa	Known RBP	13.56	□□□□□ -0.24
PPP6R1-208	ENST00000592242	POF1B	Q8WVV4	589 aa		13.56	□□□□□ -0.24
PPP6R1-208	ENST00000592242	MTMR7	Q9Y216	660 aa		13.56	□□□□□ -0.24
PPP6R1-208	ENST00000592242	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
PPP6R1-208	ENST00000592242	NLRC5	Q86WI3	1866 aa		13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	DMXL1	Q9Y485	3027 aa		13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	ENPP3	O14638	875 aa		13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	RAB11FIP3	O75154	756 aa		13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	EIF3J	O75822	258 aa	Known RBP	13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	DGKI	O75912	1065 aa		13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	APP	P05067	770 aa		13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	CTSH	P09668	335 aa		13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	RLBP1	P12271	317 aa		13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	CLCN5	P51795	746 aa		13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	ZBTB33	Q86T24	672 aa		13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	NSUN6	Q8TEA1	469 aa	Known RBP	13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	TAAR1	Q96RJ0	339 aa		13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	C16orf70	Q9BSU1	422 aa		13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	S1PR5	Q9H228	398 aa		13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	SORCS3	Q9UPU3	1222 aa		13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	CHD8	Q9HCK8	2581 aa		13.55	□□□□□ -0.24
PPP6R1-208	ENST00000592242	TSPY2	A6NKD2	308 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	BRD1	O95696	1058 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	PPARA	Q07869	468 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	MTMR3	Q13615	1198 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	HSDL1	Q3SXM5	330 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	MYSM1	Q5VVJ2	828 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	KBTBD3	Q8NAB2	608 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	KLHL23	Q8NBE8	558 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	VN1R2	Q8NFZ6	395 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	TBC1D5	Q92609	795 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	NACAP1	Q9BZK3	213 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	RNPEP	Q9H4A4	650 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	TLE6	Q9H808	572 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	GPCPD1	Q9NPB8	672 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	DLL3	Q9NYJ7	618 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	MRPL42	Q9Y6G3	142 aa	Known RBP	13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	CEP250	Q9BV73	2442 aa		13.54	□□□□□ -0.24
PPP6R1-208	ENST00000592242	FSD2	A1L4K1	749 aa		13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242	RNF113A	O15541	343 aa	Known RBP	13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242	SMIM10L2A	P0DMW4	78 aa		13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242	SMIM10L2B	P0DMW5	78 aa		13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242	RBM10	P98175	930 aa	Known RBP	13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242	CELF3	Q5SZQ8	465 aa	Known RBP	13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242	TMEM184A	Q6ZMB5	413 aa		13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242	FTSJ3	Q8IY81	847 aa	Known RBP	13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242	CMTR2	Q8IYT2	770 aa	Known RBP	13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242	NEK1	Q96PY6	1258 aa		13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242	CDCA3	Q99618	268 aa	Predicted RBP	13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242	SEMA4A	Q9H3S1	761 aa		13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242	EHMT1	Q9H9B1	1298 aa		13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242	COL20A1	Q9P218	1284 aa		13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242	MRVI1	Q9Y6F6	885 aa		13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.53	□□□□□ -0.24
PPP6R1-208	ENST00000592242		H3BRB1	525 aa		13.52	□□□□□ -0.25
PPP6R1-208	ENST00000592242		M0R2C6	588 aa		13.52	□□□□□ -0.25
PPP6R1-208	ENST00000592242	PER2	O15055	1255 aa		13.52	□□□□□ -0.25
PPP6R1-208	ENST00000592242	ZFY	P08048	801 aa	Predicted RBP	13.52	□□□□□ -0.25
PPP6R1-208	ENST00000592242	KCNC3	Q14003	757 aa		13.52	□□□□□ -0.25
PPP6R1-208	ENST00000592242	DUSP6	Q16828	381 aa		13.52	□□□□□ -0.25
PPP6R1-208	ENST00000592242	CRIPAK	Q8N1N5	446 aa		13.52	□□□□□ -0.25
PPP6R1-208	ENST00000592242	SPATA33	Q96N06	139 aa		13.52	□□□□□ -0.25
PPP6R1-208	ENST00000592242	RMDN3	Q96TC7	470 aa		13.52	□□□□□ -0.25
PPP6R1-208	ENST00000592242	BCL11A	Q9H165	835 aa		13.52	□□□□□ -0.25
PPP6R1-208	ENST00000592242	TUT1	Q9H6E5	874 aa	Known RBP	13.52	□□□□□ -0.25
PPP6R1-208	ENST00000592242	CHD6	Q8TD26	2715 aa		13.51	□□□□□ -0.25
PPP6R1-208	ENST00000592242	LMNA	P02545	664 aa	Known RBP	13.51	□□□□□ -0.25
PPP6R1-208	ENST00000592242	CHRNA1	P02708	482 aa		13.51	□□□□□ -0.25
PPP6R1-208	ENST00000592242	NR3C2	P08235	984 aa		13.51	□□□□□ -0.25
PPP6R1-208	ENST00000592242	PDHB	P11177	359 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms