RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 CTAGE1Q96RT6 745 aa31.15■■■□□ 2.58
SMAD4-213ENST00000591914 GPR20Q99678 358 aa31.15■■■□□ 2.58
SMAD4-213ENST00000591914 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.15■■■□□ 2.58
SMAD4-213ENST00000591914 GTF2IRD1Q9UHL9 959 aa31.15■■■□□ 2.58
SMAD4-213ENST00000591914 MAFGO15525 162 aa31.14■■■□□ 2.58
SMAD4-213ENST00000591914 ATP9AO75110 1047 aa31.14■■■□□ 2.58
SMAD4-213ENST00000591914 SEC24BO95487 1268 aa31.14■■■□□ 2.58
SMAD4-213ENST00000591914 PTGISQ16647 500 aa31.14■■■□□ 2.58
SMAD4-213ENST00000591914 ALG1Q9BT22 464 aa31.14■■■□□ 2.58
SMAD4-213ENST00000591914 C6orf50Q9HD87 102 aa31.14■■■□□ 2.58
SMAD4-213ENST00000591914 IL23AQ9NPF7 189 aa31.14■■■□□ 2.58
SMAD4-213ENST00000591914 HDAC6Q9UBN7 1215 aa31.14■■■□□ 2.58
SMAD4-213ENST00000591914 LGALS2P05162 132 aa31.13■■■□□ 2.57
SMAD4-213ENST00000591914 TMEM240Q5SV17 173 aa31.13■■■□□ 2.57
SMAD4-213ENST00000591914 MXRA8Q9BRK3 442 aa31.13■■■□□ 2.57
SMAD4-213ENST00000591914 NOD1Q9Y239 953 aa31.13■■■□□ 2.57
SMAD4-213ENST00000591914 TELO2Q9Y4R8 837 aa31.13■■■□□ 2.57
SMAD4-213ENST00000591914 PITPNM1O00562 1244 aa31.12■■■□□ 2.57
SMAD4-213ENST00000591914 ADAMTS3O15072 1205 aa31.12■■■□□ 2.57
SMAD4-213ENST00000591914 MCTP2Q6DN12 878 aa31.12■■■□□ 2.57
SMAD4-213ENST00000591914 PSRC1Q6PGN9 363 aaPredicted RBP31.12■■■□□ 2.57
SMAD4-213ENST00000591914 TRIM22Q8IYM9 498 aa31.12■■■□□ 2.57
SMAD4-213ENST00000591914 H3BRB1 525 aa31.11■■■□□ 2.57
SMAD4-213ENST00000591914 CPLX1O14810 134 aa31.11■■■□□ 2.57
SMAD4-213ENST00000591914 ACRP10323 421 aa31.11■■■□□ 2.57
SMAD4-213ENST00000591914 GNA11P29992 359 aa31.11■■■□□ 2.57
SMAD4-213ENST00000591914 STK3Q13188 491 aa31.11■■■□□ 2.57
SMAD4-213ENST00000591914 JAKMIP3Q5VZ66 844 aa31.11■■■□□ 2.57
SMAD4-213ENST00000591914 REXO1Q8N1G1 1221 aaKnown RBP31.11■■■□□ 2.57
SMAD4-213ENST00000591914 CCDC148Q8NFR7 591 aa31.11■■■□□ 2.57
SMAD4-213ENST00000591914 CYP2W1Q8TAV3 490 aa31.11■■■□□ 2.57
SMAD4-213ENST00000591914 TUT1Q9H6E5 874 aaKnown RBP31.11■■■□□ 2.57
SMAD4-213ENST00000591914 ARHGAP4P98171 946 aa31.1■■■□□ 2.57
SMAD4-213ENST00000591914 SSRP1Q08945 709 aaKnown RBP31.1■■■□□ 2.57
SMAD4-213ENST00000591914 CEP55Q53EZ4 464 aa31.1■■■□□ 2.57
SMAD4-213ENST00000591914 ZNF365Q70YC5 407 aa31.1■■■□□ 2.57
SMAD4-213ENST00000591914 CRYGNQ8WXF5 182 aa31.1■■■□□ 2.57
SMAD4-213ENST00000591914 SCLYQ96I15 445 aa31.1■■■□□ 2.57
SMAD4-213ENST00000591914 SH3GLB2Q9NR46 395 aa31.1■■■□□ 2.57
SMAD4-213ENST00000591914 KCNH7Q9NS40 1196 aa31.1■■■□□ 2.57
SMAD4-213ENST00000591914 VPS54Q9P1Q0 977 aa31.1■■■□□ 2.57
SMAD4-213ENST00000591914 SP4Q02446 784 aa31.09■■■□□ 2.57
SMAD4-213ENST00000591914 BFSP2Q13515 415 aa31.09■■■□□ 2.57
SMAD4-213ENST00000591914 RASIP1Q5U651 963 aa31.09■■■□□ 2.57
SMAD4-213ENST00000591914 CPLX2Q6PUV4 134 aaKnown RBP31.09■■■□□ 2.57
SMAD4-213ENST00000591914 VWCEQ96DN2 955 aa31.09■■■□□ 2.57
SMAD4-213ENST00000591914 TPCN1Q9ULQ1 816 aa31.09■■■□□ 2.57
SMAD4-213ENST00000591914 TANC1Q9C0D5 1861 aa31.09■■■□□ 2.57
SMAD4-213ENST00000591914 MEIS1O00470 390 aa31.08■■■□□ 2.57
SMAD4-213ENST00000591914 SMAD3P84022 425 aaKnown RBP31.08■■■□□ 2.57
SMAD4-213ENST00000591914 ANKRD1Q15327 319 aa31.08■■■□□ 2.57
SMAD4-213ENST00000591914 CAGE1Q8TC20 777 aa31.08■■■□□ 2.57
SMAD4-213ENST00000591914 BICD2Q8TD16 824 aa31.08■■■□□ 2.57
SMAD4-213ENST00000591914 DHX38Q92620 1227 aaKnown RBP31.08■■■□□ 2.57
SMAD4-213ENST00000591914 PKD2L1Q9P0L9 805 aa31.08■■■□□ 2.57
SMAD4-213ENST00000591914 DEXIO95424 95 aa31.07■■■□□ 2.56
SMAD4-213ENST00000591914 CYP3A4P08684 503 aa31.07■■■□□ 2.56
SMAD4-213ENST00000591914 HOXC8P31273 242 aa31.07■■■□□ 2.56
SMAD4-213ENST00000591914 AK2P54819 239 aa31.07■■■□□ 2.56
SMAD4-213ENST00000591914 RBL2Q08999 1139 aa31.07■■■□□ 2.56
SMAD4-213ENST00000591914 SCRN1Q12765 414 aa31.07■■■□□ 2.56
SMAD4-213ENST00000591914 HIC1Q14526 733 aa31.07■■■□□ 2.56
SMAD4-213ENST00000591914 NIPA1Q7RTP0 329 aa31.07■■■□□ 2.56
SMAD4-213ENST00000591914 TRIM50Q86XT4 487 aa31.07■■■□□ 2.56
SMAD4-213ENST00000591914 RPUSD2Q8IZ73 545 aaKnown RBP31.07■■■□□ 2.56
SMAD4-213ENST00000591914 CCDC155Q8N6L0 562 aa31.07■■■□□ 2.56
SMAD4-213ENST00000591914 RETREG2Q8NC44 543 aa31.07■■■□□ 2.56
SMAD4-213ENST00000591914 PFKFB2O60825 505 aa31.06■■■□□ 2.56
SMAD4-213ENST00000591914 IQCF3P0C7M6 154 aa31.06■■■□□ 2.56
SMAD4-213ENST00000591914 ARP10275 920 aa31.06■■■□□ 2.56
SMAD4-213ENST00000591914 HERVK_113Q902F9 699 aa31.06■■■□□ 2.56
SMAD4-213ENST00000591914 SLKQ9H2G2 1235 aaPredicted RBP31.06■■■□□ 2.56
SMAD4-213ENST00000591914 ZNF215Q9UL58 517 aaPredicted RBP31.06■■■□□ 2.56
SMAD4-213ENST00000591914 NFASCO94856 1347 aa31.05■■■□□ 2.56
SMAD4-213ENST00000591914 FGBP02675 491 aa31.05■■■□□ 2.56
SMAD4-213ENST00000591914 PFKMP08237 780 aa31.05■■■□□ 2.56
SMAD4-213ENST00000591914 RFC2P35250 354 aa31.05■■■□□ 2.56
SMAD4-213ENST00000591914 TCF7P36402 384 aaPredicted RBP31.05■■■□□ 2.56
SMAD4-213ENST00000591914 PTK7Q13308 1070 aa31.05■■■□□ 2.56
SMAD4-213ENST00000591914 FAM109BQ6ICB4 259 aaPredicted RBP31.05■■■□□ 2.56
SMAD4-213ENST00000591914 AFAP1L1Q8TED9 768 aa31.05■■■□□ 2.56
SMAD4-213ENST00000591914 SEPT1Q8WYJ6 367 aa31.05■■■□□ 2.56
SMAD4-213ENST00000591914 AGO4Q9HCK5 861 aaKnown RBP31.05■■■□□ 2.56
SMAD4-213ENST00000591914 JPH1Q9HDC5 661 aaPredicted RBP31.05■■■□□ 2.56
SMAD4-213ENST00000591914 SCN5AQ14524 2016 aa31.04■■■□□ 2.56
SMAD4-213ENST00000591914 GSTTP1A0A1W2PQM5 241 aa31.04■■■□□ 2.56
SMAD4-213ENST00000591914 FAM86B1E9PN63 330 aa31.04■■■□□ 2.56
SMAD4-213ENST00000591914 FAM86B2P0C5J1 330 aa31.04■■■□□ 2.56
SMAD4-213ENST00000591914 SMIM10L2AP0DMW4 78 aa31.04■■■□□ 2.56
SMAD4-213ENST00000591914 SMIM10L2BP0DMW5 78 aa31.04■■■□□ 2.56
SMAD4-213ENST00000591914 ZNF200P98182 395 aaPredicted RBP31.04■■■□□ 2.56
SMAD4-213ENST00000591914 C8orf34Q49A92 452 aa31.04■■■□□ 2.56
SMAD4-213ENST00000591914 UTP14CQ5TAP6 766 aaKnown RBP31.04■■■□□ 2.56
SMAD4-213ENST00000591914 FAM177A1Q8N128 213 aaPredicted RBP31.04■■■□□ 2.56
SMAD4-213ENST00000591914 DEFB123Q8N688 67 aa31.04■■■□□ 2.56
SMAD4-213ENST00000591914 RASGRP4Q8TDF6 673 aa31.04■■■□□ 2.56
SMAD4-213ENST00000591914 TRIP12Q14669 1992 aaPredicted RBP31.03■■■□□ 2.56
SMAD4-213ENST00000591914 IGLV3-22A0A075B6J6 115 aa31.03■■■□□ 2.56
SMAD4-213ENST00000591914 CDKL5O76039 1030 aa31.03■■■□□ 2.56
SMAD4-213ENST00000591914 ZNF76P36508 570 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms