RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 SMIM5Q71RC9 77 aa12.52□□□□□ -0.4
SEH1L-208ENST00000590843 ZKSCAN4Q969J2 545 aaPredicted RBP12.52□□□□□ -0.4
SEH1L-208ENST00000590843 RICTORQ6R327 1708 aa12.52□□□□□ -0.4
SEH1L-208ENST00000590843 ELP1O95163 1332 aa12.52□□□□□ -0.4
SEH1L-208ENST00000590843 SPDYE16A6NNV3 312 aaPredicted RBP12.52□□□□□ -0.41
SEH1L-208ENST00000590843 MAP3K13O43283 966 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 ZSCAN22P10073 491 aaPredicted RBP12.52□□□□□ -0.41
SEH1L-208ENST00000590843 ITGA4P13612 1032 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 PDE6CP51160 858 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 APPL2Q8NEU8 664 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.52□□□□□ -0.41
SEH1L-208ENST00000590843 UBN1Q9NPG3 1134 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 THG1LQ9NWX6 298 aaKnown RBP12.52□□□□□ -0.41
SEH1L-208ENST00000590843 KANSL3Q9P2N6 904 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 CTSHP09668 335 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 SCP2P22307 547 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 ORC2Q13416 577 aaPredicted RBP12.52□□□□□ -0.41
SEH1L-208ENST00000590843 RAPGEF1Q13905 1077 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 NBPF12Q5TAG4 269 aaPredicted RBP12.52□□□□□ -0.41
SEH1L-208ENST00000590843 STKLD1Q8NE28 680 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 BBXQ8WY36 941 aaPredicted RBP12.52□□□□□ -0.41
SEH1L-208ENST00000590843 IQCDQ96DY2 449 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 JPH1Q9HDC5 661 aaPredicted RBP12.52□□□□□ -0.41
SEH1L-208ENST00000590843 TFIP11Q9UBB9 837 aaKnown RBP12.52□□□□□ -0.41
SEH1L-208ENST00000590843 SLC4A7Q9Y6M7 1214 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 IPO5O00410 1097 aaKnown RBP12.52□□□□□ -0.41
SEH1L-208ENST00000590843 NCAM2O15394 837 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 XYLBO75191 536 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 ZNF853P0CG23 659 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 MCM4P33991 863 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 HAUS1Q96CS2 278 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 TM6SF1Q9BZW5 370 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 PIH1D3Q9NQM4 214 aaKnown RBP12.52□□□□□ -0.41
SEH1L-208ENST00000590843 PCDHA6Q9UN73 950 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 PCDHA8Q9Y5H6 950 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.52□□□□□ -0.41
SEH1L-208ENST00000590843 ITSN1Q15811 1721 aa12.52□□□□□ -0.41
SEH1L-208ENST00000590843 GJC1P36383 396 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 PIK3CAP42336 1068 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 MXD4Q14582 209 aaPredicted RBP12.51□□□□□ -0.41
SEH1L-208ENST00000590843 PI4K2BQ8TCG2 481 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 ACSF2Q96CM8 615 aaPredicted RBP12.51□□□□□ -0.41
SEH1L-208ENST00000590843 NCAPGQ9BPX3 1015 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 FAM196BA6NMK8 535 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 PI4K2BG5E9Z4 385 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 ERCC3P19447 782 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 BFSP1Q12934 665 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 RAB3IL1Q8TBN0 382 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 JAKMIP2Q96AA8 810 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 MYL10Q9BUA6 226 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 IRAK4Q9NWZ3 460 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 STK39Q9UEW8 545 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 PCDHA10Q9Y5I2 948 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 GAS2O43903 313 aaKnown RBP12.51□□□□□ -0.41
SEH1L-208ENST00000590843 PPFIA3O75145 1194 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 DDR1Q08345 913 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 HADHQ16836 314 aaKnown RBP12.51□□□□□ -0.41
SEH1L-208ENST00000590843 TEX2Q8IWB9 1127 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 G3BP2Q9UN86 482 aaKnown RBP12.51□□□□□ -0.41
SEH1L-208ENST00000590843 PIN4Q9Y237 131 aaKnown RBP12.51□□□□□ -0.41
SEH1L-208ENST00000590843 FLT1P17948 1338 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 GPR75-ASB3A0A0A6YYF3 556 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 SHTN1A0MZ66 631 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 ERLIN1O75477 346 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 ALDH1A3P47895 512 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 PSMC5P62195 406 aa12.51□□□□□ -0.41
SEH1L-208ENST00000590843 BAATQ14032 418 aaPredicted RBP12.51□□□□□ -0.41
SEH1L-208ENST00000590843 BTG3Q14201 252 aaPredicted RBP12.51□□□□□ -0.41
SEH1L-208ENST00000590843 IPO11Q9UI26 975 aaKnown RBP12.51□□□□□ -0.41
SEH1L-208ENST00000590843 MTUS1Q9ULD2 1270 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 CSF1RP07333 972 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 PRELPP51888 382 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 GSTA5Q7RTV2 222 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 C3P01024 1663 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 NEMP1O14524 444 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 EIF3JO75822 258 aaKnown RBP12.5□□□□□ -0.41
SEH1L-208ENST00000590843 RAB27AP51159 221 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 OAZ1P54368 228 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 ARL13BQ3SXY8 428 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 N4BP2L2Q92802 583 aaPredicted RBP12.5□□□□□ -0.41
SEH1L-208ENST00000590843 PRMT6Q96LA8 375 aaPredicted RBP12.5□□□□□ -0.41
SEH1L-208ENST00000590843 IGKV5-2P06315 115 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 MCM3P25205 808 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 LONP1P36776 959 aaKnown RBP12.5□□□□□ -0.41
SEH1L-208ENST00000590843 TFAMQ00059 246 aaKnown RBP12.5□□□□□ -0.41
SEH1L-208ENST00000590843 TMC7Q7Z402 723 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 NLGN2Q8NFZ4 835 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 GPKOWQ92917 476 aaPredicted RBP eCLIP12.5□□□□□ -0.41
SEH1L-208ENST00000590843 AKT1S1Q96B36 256 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 DEFB118Q96PH6 123 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 MRPL4Q9BYD3 311 aaKnown RBP12.5□□□□□ -0.41
SEH1L-208ENST00000590843 DOLKQ9UPQ8 538 aa12.5□□□□□ -0.41
SEH1L-208ENST00000590843 WNT10BO00744 389 aa12.49□□□□□ -0.41
SEH1L-208ENST00000590843 RFC5P40937 340 aa12.49□□□□□ -0.41
SEH1L-208ENST00000590843 RCAN1P53805 252 aa12.49□□□□□ -0.41
SEH1L-208ENST00000590843 TAF2Q6P1X5 1199 aa12.49□□□□□ -0.41
SEH1L-208ENST00000590843 TIPINQ9BVW5 301 aa12.49□□□□□ -0.41
SEH1L-208ENST00000590843 EDEM3Q9BZQ6 932 aa12.49□□□□□ -0.41
SEH1L-208ENST00000590843 TSHZ2Q9NRE2 1034 aa12.49□□□□□ -0.41
SEH1L-208ENST00000590843 MLLT1Q03111 559 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms