RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 KCNJ14Q9UNX9 436 aa16.01■□□□□ 0.15
SCAMP4-212ENST00000590266 NOD1Q9Y239 953 aa16.01■□□□□ 0.15
SCAMP4-212ENST00000590266 TELO2Q9Y4R8 837 aa16.01■□□□□ 0.15
SCAMP4-212ENST00000590266 DNAH12Q6ZR08 3092 aa16.01■□□□□ 0.15
SCAMP4-212ENST00000590266 RANBP2P49792 3224 aaKnown RBP16■□□□□ 0.15
SCAMP4-212ENST00000590266 SOX1O00570 391 aaPredicted RBP16■□□□□ 0.15
SCAMP4-212ENST00000590266 KIAA0355O15063 1070 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 PPFIA4O75335 1185 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 CD4P01730 458 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 ARP10275 920 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 CYP2C9P11712 490 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 KCNA2P16389 499 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 XBP1P17861 261 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 RBM25P49756 843 aaKnown RBP16■□□□□ 0.15
SCAMP4-212ENST00000590266 KIAA0753Q2KHM9 967 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 CEP55Q53EZ4 464 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 MCTP2Q6DN12 878 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 C7orf31Q8N865 590 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 GIMAP8Q8ND71 665 aaPredicted RBP16■□□□□ 0.15
SCAMP4-212ENST00000590266 SENP7Q9BQF6 1050 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 KATNAL1Q9BW62 490 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 SEZ6LQ9BYH1 1024 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 HIPK3Q9H422 1215 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 KCNH7Q9NS40 1196 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 GJB4Q9NTQ9 266 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 PCDHA4Q9UN74 947 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 LIMCH1Q9UPQ0 1083 aa16■□□□□ 0.15
SCAMP4-212ENST00000590266 STK36Q9NRP7 1315 aa15.99■□□□□ 0.15
SCAMP4-212ENST00000590266 DDX39AO00148 427 aaKnown RBP15.99■□□□□ 0.15
SCAMP4-212ENST00000590266 JAK2O60674 1132 aa15.99■□□□□ 0.15
SCAMP4-212ENST00000590266 F2P00734 622 aa15.99■□□□□ 0.15
SCAMP4-212ENST00000590266 TIMP1P01033 207 aa15.99■□□□□ 0.15
SCAMP4-212ENST00000590266 LGALS2P05162 132 aa15.99■□□□□ 0.15
SCAMP4-212ENST00000590266 CYP2C18P33260 490 aa15.99■□□□□ 0.15
SCAMP4-212ENST00000590266 NFRKBQ6P4R8 1299 aa15.99■□□□□ 0.15
SCAMP4-212ENST00000590266 PLA2G4DQ86XP0 818 aa15.99■□□□□ 0.15
SCAMP4-212ENST00000590266 TRIM50Q86XT4 487 aa15.99■□□□□ 0.15
SCAMP4-212ENST00000590266 CCDC83Q8IWF9 413 aa15.99■□□□□ 0.15
SCAMP4-212ENST00000590266 BLIDQ8IZY5 108 aa15.99■□□□□ 0.15
SCAMP4-212ENST00000590266 GPR20Q99678 358 aa15.99■□□□□ 0.15
SCAMP4-212ENST00000590266 UMODL1Q5DID0 1318 aa15.98■□□□□ 0.15
SCAMP4-212ENST00000590266 FAM86B1E9PN63 330 aa15.98■□□□□ 0.15
SCAMP4-212ENST00000590266 FAM86B2P0C5J1 330 aa15.98■□□□□ 0.15
SCAMP4-212ENST00000590266 SUPT20HL2P0C7V6 817 aa15.98■□□□□ 0.15
SCAMP4-212ENST00000590266 TCF7P36402 384 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-212ENST00000590266 CCL23P55773 120 aa15.98■□□□□ 0.15
SCAMP4-212ENST00000590266 FPGSQ05932 587 aa15.98■□□□□ 0.15
SCAMP4-212ENST00000590266 PTGISQ16647 500 aa15.98■□□□□ 0.15
SCAMP4-212ENST00000590266 PRR16Q569H4 304 aa15.98■□□□□ 0.15
SCAMP4-212ENST00000590266 NSUN7Q8NE18 718 aaKnown RBP15.98■□□□□ 0.15
SCAMP4-212ENST00000590266 WASF1Q92558 559 aa15.98■□□□□ 0.15
SCAMP4-212ENST00000590266 SDF4Q9BRK5 362 aa15.98■□□□□ 0.15
SCAMP4-212ENST00000590266 AGO4Q9HCK5 861 aaKnown RBP15.98■□□□□ 0.15
SCAMP4-212ENST00000590266 HDAC6Q9UBN7 1215 aa15.98■□□□□ 0.15
SCAMP4-212ENST00000590266 H3BRB1 525 aa15.97■□□□□ 0.15
SCAMP4-212ENST00000590266 MAFGO15525 162 aa15.97■□□□□ 0.15
SCAMP4-212ENST00000590266 HOXD8P13378 290 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-212ENST00000590266 RABEP1Q15276 862 aa15.97■□□□□ 0.15
SCAMP4-212ENST00000590266 LRIT3Q3SXY7 679 aa15.97■□□□□ 0.15
SCAMP4-212ENST00000590266 GDF6Q6KF10 455 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-212ENST00000590266 TBCKQ8TEA7 893 aa15.97■□□□□ 0.15
SCAMP4-212ENST00000590266 C16orf70Q9BSU1 422 aa15.97■□□□□ 0.15
SCAMP4-212ENST00000590266 TUT1Q9H6E5 874 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-212ENST00000590266 JPH1Q9HDC5 661 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-212ENST00000590266 SLC9A2Q9UBY0 812 aa15.97■□□□□ 0.15
SCAMP4-212ENST00000590266 MEIS1O00470 390 aa15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 ST18O60284 1047 aa15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 CYP3A4P08684 503 aa15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 FDPSP14324 419 aaKnown RBP15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 CSF2RAP15509 400 aa15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 MARK3P27448 753 aa15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 ZNF200P98182 395 aaPredicted RBP15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 PTPN11Q06124 597 aaPredicted RBP15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 ST3GAL1Q11201 340 aa15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 ITGB3BPQ13352 177 aaPredicted RBP15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 MFSD5Q6N075 450 aa15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 TMEM199Q8N511 208 aa15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 SEPT1Q8WYJ6 367 aa15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 GLG1Q92896 1179 aa15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 ZNF577Q9BSK1 485 aa15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 PHF20Q9BVI0 1012 aa15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 NOC4LQ9BVI4 516 aaKnown RBP15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 GTF2IRD1Q9UHL9 959 aa15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 ZNF215Q9UL58 517 aaPredicted RBP15.96■□□□□ 0.15
SCAMP4-212ENST00000590266 IGLV3-22A0A075B6J6 115 aa15.95■□□□□ 0.14
SCAMP4-212ENST00000590266 CCDC194A0A1B0GVG4 234 aa15.95■□□□□ 0.14
SCAMP4-212ENST00000590266 HAS3O00219 553 aa15.95■□□□□ 0.14
SCAMP4-212ENST00000590266 ACRP10323 421 aa15.95■□□□□ 0.14
SCAMP4-212ENST00000590266 EPHB4P54760 987 aa15.95■□□□□ 0.14
SCAMP4-212ENST00000590266 SETQ01105 290 aaPredicted RBP15.95■□□□□ 0.14
SCAMP4-212ENST00000590266 TRIM29Q14134 588 aa15.95■□□□□ 0.14
SCAMP4-212ENST00000590266 NONOQ15233 471 aaKnown RBP eCLIP15.95■□□□□ 0.143e-6■■■■□ 21.1
SCAMP4-212ENST00000590266 NPY5RQ15761 445 aa15.95■□□□□ 0.14
SCAMP4-212ENST00000590266 C9orf50Q5SZB4 431 aa15.95■□□□□ 0.14
SCAMP4-212ENST00000590266 GALNT17Q6IS24 598 aa15.95■□□□□ 0.14
SCAMP4-212ENST00000590266 NIPA1Q7RTP0 329 aa15.95■□□□□ 0.14
SCAMP4-212ENST00000590266 DEFB123Q8N688 67 aa15.95■□□□□ 0.14
SCAMP4-212ENST00000590266 DAGLBQ8NCG7 672 aa15.95■□□□□ 0.14
SCAMP4-212ENST00000590266 OXER1Q8TDS5 423 aa15.95■□□□□ 0.14
SCAMP4-212ENST00000590266 CRYGNQ8WXF5 182 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms