RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 GDF6Q6KF10 455 aaPredicted RBP20.85■□□□□ 0.93
DDX39A-212ENST00000590260 NLRX1Q86UT6 975 aa20.85■□□□□ 0.93
DDX39A-212ENST00000590260 SESTD1Q86VW0 696 aa20.85■□□□□ 0.93
DDX39A-212ENST00000590260 NECAB1Q8N987 351 aa20.85■□□□□ 0.93
DDX39A-212ENST00000590260 IGLV3-22A0A075B6J6 115 aa20.84■□□□□ 0.93
DDX39A-212ENST00000590260 FAM86B1E9PN63 330 aa20.84■□□□□ 0.93
DDX39A-212ENST00000590260 DEXIO95424 95 aa20.84■□□□□ 0.93
DDX39A-212ENST00000590260 FAM86B2P0C5J1 330 aa20.84■□□□□ 0.93
DDX39A-212ENST00000590260 NEK4P51957 841 aa20.84■□□□□ 0.93
DDX39A-212ENST00000590260 ARHGAP4P98171 946 aa20.84■□□□□ 0.93
DDX39A-212ENST00000590260 PTPN11Q06124 597 aaPredicted RBP20.84■□□□□ 0.93
DDX39A-212ENST00000590260 MTMR1Q13613 665 aa20.84■□□□□ 0.93
DDX39A-212ENST00000590260 NEDD9Q14511 834 aa20.84■□□□□ 0.93
DDX39A-212ENST00000590260 MFSD10Q14728 455 aa20.84■□□□□ 0.93
DDX39A-212ENST00000590260 LRIT3Q3SXY7 679 aa20.84■□□□□ 0.93
DDX39A-212ENST00000590260 FAM47CQ5HY64 1035 aa20.84■□□□□ 0.93
DDX39A-212ENST00000590260 ALG1Q9BT22 464 aa20.84■□□□□ 0.93
DDX39A-212ENST00000590260 GJB4Q9NTQ9 266 aa20.84■□□□□ 0.93
DDX39A-212ENST00000590260 PKD2L1Q9P0L9 805 aa20.84■□□□□ 0.93
DDX39A-212ENST00000590260 HDAC6Q9UBN7 1215 aa20.84■□□□□ 0.93
DDX39A-212ENST00000590260 GSTTP1A0A1W2PQM5 241 aa20.83■□□□□ 0.93
DDX39A-212ENST00000590260 M0R2N6 131 aa20.83■□□□□ 0.93
DDX39A-212ENST00000590260 MEIS1O00470 390 aa20.83■□□□□ 0.93
DDX39A-212ENST00000590260 LGALS2P05162 132 aa20.83■□□□□ 0.93
DDX39A-212ENST00000590260 FDPSP14324 419 aaKnown RBP20.83■□□□□ 0.93
DDX39A-212ENST00000590260 CSF2RAP15509 400 aa20.83■□□□□ 0.93
DDX39A-212ENST00000590260 CHMP4BP1P59074 171 aa20.83■□□□□ 0.93
DDX39A-212ENST00000590260 AKAP17AQ02040 695 aaKnown RBP20.83■□□□□ 0.93
DDX39A-212ENST00000590260 FPGSQ05932 587 aa20.83■□□□□ 0.93
DDX39A-212ENST00000590260 KIAA0753Q2KHM9 967 aa20.83■□□□□ 0.93
DDX39A-212ENST00000590260 TRIM50Q86XT4 487 aa20.83■□□□□ 0.93
DDX39A-212ENST00000590260 DHX38Q92620 1227 aaKnown RBP20.83■□□□□ 0.93
DDX39A-212ENST00000590260 GLT8D2Q9H1C3 349 aa20.83■□□□□ 0.93
DDX39A-212ENST00000590260 SLKQ9H2G2 1235 aaPredicted RBP20.83■□□□□ 0.93
DDX39A-212ENST00000590260 HIPK3Q9H422 1215 aa20.83■□□□□ 0.93
DDX39A-212ENST00000590260 C6orf50Q9HD87 102 aa20.83■□□□□ 0.93
DDX39A-212ENST00000590260 SH3GLB2Q9NR46 395 aa20.83■□□□□ 0.93
DDX39A-212ENST00000590260 KCNH7Q9NS40 1196 aa20.83■□□□□ 0.93
DDX39A-212ENST00000590260 GTF2IRD1Q9UHL9 959 aa20.83■□□□□ 0.93
DDX39A-212ENST00000590260 TANC1Q9C0D5 1861 aa20.83■□□□□ 0.92
DDX39A-212ENST00000590260 SCN5AQ14524 2016 aa20.82■□□□□ 0.92
DDX39A-212ENST00000590260 CPLX1O14810 134 aa20.82■□□□□ 0.92
DDX39A-212ENST00000590260 CYP3A4P08684 503 aa20.82■□□□□ 0.92
DDX39A-212ENST00000590260 ZNF200P98182 395 aaPredicted RBP20.82■□□□□ 0.92
DDX39A-212ENST00000590260 SP4Q02446 784 aa20.82■□□□□ 0.92
DDX39A-212ENST00000590260 ITGB3BPQ13352 177 aaPredicted RBP20.82■□□□□ 0.92
DDX39A-212ENST00000590260 CEP55Q53EZ4 464 aa20.82■□□□□ 0.92
DDX39A-212ENST00000590260 REXO1Q8N1G1 1221 aaKnown RBP20.82■□□□□ 0.92
DDX39A-212ENST00000590260 CCDC12Q8WUD4 166 aaPredicted RBP20.82■□□□□ 0.92
DDX39A-212ENST00000590260 WNT8BQ93098 351 aa20.82■□□□□ 0.92
DDX39A-212ENST00000590260 GTF3C6Q969F1 213 aa20.82■□□□□ 0.92
DDX39A-212ENST00000590260 LAMA2P24043 3122 aaKnown RBP20.81■□□□□ 0.92
DDX39A-212ENST00000590260 SLC34A2O95436 690 aa20.81■□□□□ 0.92
DDX39A-212ENST00000590260 HOXC8P31273 242 aa20.81■□□□□ 0.92
DDX39A-212ENST00000590260 CCL23P55773 120 aa20.81■□□□□ 0.92
DDX39A-212ENST00000590260 ANKRD1Q15327 319 aa20.81■□□□□ 0.92
DDX39A-212ENST00000590260 TRIM22Q8IYM9 498 aa20.81■□□□□ 0.92
DDX39A-212ENST00000590260 CCDC148Q8NFR7 591 aa20.81■□□□□ 0.92
DDX39A-212ENST00000590260 SCLYQ96I15 445 aa20.81■□□□□ 0.92
DDX39A-212ENST00000590260 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.81■□□□□ 0.923e-12■□□□□ 11.1
DDX39A-212ENST00000590260 EHMT1Q9H9B1 1298 aa20.81■□□□□ 0.92
DDX39A-212ENST00000590260 AGO4Q9HCK5 861 aaKnown RBP20.81■□□□□ 0.92
DDX39A-212ENST00000590260 STK36Q9NRP7 1315 aa20.8■□□□□ 0.92
DDX39A-212ENST00000590260 H3BRB1 525 aa20.8■□□□□ 0.92
DDX39A-212ENST00000590260 MAFGO15525 162 aa20.8■□□□□ 0.92
DDX39A-212ENST00000590260 EIF5BO60841 1220 aaKnown RBP20.8■□□□□ 0.92
DDX39A-212ENST00000590260 ACRP10323 421 aa20.8■□□□□ 0.92
DDX39A-212ENST00000590260 GNA11P29992 359 aa20.8■□□□□ 0.92
DDX39A-212ENST00000590260 RBM25P49756 843 aaKnown RBP20.8■□□□□ 0.92
DDX39A-212ENST00000590260 PTGISQ16647 500 aa20.8■□□□□ 0.92
DDX39A-212ENST00000590260 TMEM240Q5SV17 173 aa20.8■□□□□ 0.92
DDX39A-212ENST00000590260 LENG9Q96B70 501 aa20.8■□□□□ 0.92
DDX39A-212ENST00000590260 CDHR1Q96JP9 859 aa20.8■□□□□ 0.92
DDX39A-212ENST00000590260 PCYT2Q99447 389 aa20.8■□□□□ 0.92
DDX39A-212ENST00000590260 TUT1Q9H6E5 874 aaKnown RBP20.8■□□□□ 0.92
DDX39A-212ENST00000590260 KCNJ14Q9UNX9 436 aa20.8■□□□□ 0.92
DDX39A-212ENST00000590260 TRIP12Q14669 1992 aaPredicted RBP20.79■□□□□ 0.92
DDX39A-212ENST00000590260 DHX15O43143 795 aaKnown RBP20.79■□□□□ 0.92
DDX39A-212ENST00000590260 GPNMBQ14956 572 aa20.79■□□□□ 0.92
DDX39A-212ENST00000590260 TRIM71Q2Q1W2 868 aaKnown RBP20.79■□□□□ 0.92
DDX39A-212ENST00000590260 DAGLBQ8NCG7 672 aa20.79■□□□□ 0.92
DDX39A-212ENST00000590260 NSUN7Q8NE18 718 aaKnown RBP20.79■□□□□ 0.92
DDX39A-212ENST00000590260 UIMC1Q96RL1 719 aa20.79■□□□□ 0.92
DDX39A-212ENST00000590260 KATNAL1Q9BW62 490 aa20.79■□□□□ 0.92
DDX39A-212ENST00000590260 C22orf23Q9BZE7 217 aa20.79■□□□□ 0.92
DDX39A-212ENST00000590260 PCDHA4Q9UN74 947 aa20.79■□□□□ 0.92
DDX39A-212ENST00000590260 NOP56O00567 594 aaKnown RBP20.78■□□□□ 0.92
DDX39A-212ENST00000590260 SUPT20HL2P0C7V6 817 aa20.78■□□□□ 0.92
DDX39A-212ENST00000590260 CIITAP33076 1130 aa20.78■□□□□ 0.92
DDX39A-212ENST00000590260 TCF7P36402 384 aaPredicted RBP20.78■□□□□ 0.92
DDX39A-212ENST00000590260 NLRP5P59047 1200 aa20.78■□□□□ 0.92
DDX39A-212ENST00000590260 UTP14CQ5TAP6 766 aaKnown RBP20.78■□□□□ 0.92
DDX39A-212ENST00000590260 RASIP1Q5U651 963 aa20.78■□□□□ 0.92
DDX39A-212ENST00000590260 TRAF7Q6Q0C0 670 aa20.78■□□□□ 0.92
DDX39A-212ENST00000590260 NIPA1Q7RTP0 329 aa20.78■□□□□ 0.92
DDX39A-212ENST00000590260 GIMAP8Q8ND71 665 aaPredicted RBP20.78■□□□□ 0.92
DDX39A-212ENST00000590260 PHF20Q9BVI0 1012 aa20.78■□□□□ 0.92
DDX39A-212ENST00000590260 NFASCO94856 1347 aa20.78■□□□□ 0.92
DDX39A-212ENST00000590260 JAK2O60674 1132 aa20.77■□□□□ 0.92
DDX39A-212ENST00000590260 CCNE2O96020 404 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms