RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 XRRA1Q6P2D8 792 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 METTL7BQ6UX53 244 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 SPRED2Q7Z698 418 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 TMCO2Q7Z6W1 182 aaPredicted RBP20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 ESYT1Q9BSJ8 1104 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 BCAS3Q9H6U6 928 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 DOCK5Q9H7D0 1870 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 SH2B2O14492 632 aaPredicted RBP20.67■□□□□ 0.9
PRKCSH-211ENST00000590098 SLC27A2O14975 620 aa20.67■□□□□ 0.9
PRKCSH-211ENST00000590098 LGALS2P05162 132 aa20.67■□□□□ 0.9
PRKCSH-211ENST00000590098 THPOP40225 353 aa20.67■□□□□ 0.9
PRKCSH-211ENST00000590098 PCNX4Q63HM2 1172 aa20.67■□□□□ 0.9
PRKCSH-211ENST00000590098 USP17L6PQ6QN14 398 aa20.67■□□□□ 0.9
PRKCSH-211ENST00000590098 CYFIP1Q7L576 1253 aa20.67■□□□□ 0.9
PRKCSH-211ENST00000590098 SERINC5Q86VE9 423 aa20.67■□□□□ 0.9
PRKCSH-211ENST00000590098 ATP6V0A1Q93050 837 aa20.67■□□□□ 0.9
PRKCSH-211ENST00000590098 WNT8BQ93098 351 aa20.67■□□□□ 0.9
PRKCSH-211ENST00000590098 USP26Q9BXU7 913 aa20.67■□□□□ 0.9
PRKCSH-211ENST00000590098 EMSYQ7Z589 1322 aa20.67■□□□□ 0.9
PRKCSH-211ENST00000590098 BDP1A6H8Y1 2624 aa20.67■□□□□ 0.9
PRKCSH-211ENST00000590098 MUC3AQ02505 3323 aa20.66■□□□□ 0.9
PRKCSH-211ENST00000590098 PIK3CDO00329 1044 aa20.66■□□□□ 0.9
PRKCSH-211ENST00000590098 PLEKHA8P1O95397 391 aa20.66■□□□□ 0.9
PRKCSH-211ENST00000590098 POU3F3P20264 500 aaPredicted RBP20.66■□□□□ 0.9
PRKCSH-211ENST00000590098 DEFB103AP81534 67 aa20.66■□□□□ 0.9
PRKCSH-211ENST00000590098 SKIV2LQ15477 1246 aaKnown RBP20.66■□□□□ 0.9
PRKCSH-211ENST00000590098 KRT40Q6A162 431 aa20.66■□□□□ 0.9
PRKCSH-211ENST00000590098 NLRX1Q86UT6 975 aa20.66■□□□□ 0.9
PRKCSH-211ENST00000590098 SRBD1Q8N5C6 995 aaKnown RBP20.66■□□□□ 0.9
PRKCSH-211ENST00000590098 ANO2Q9NQ90 1003 aa20.66■□□□□ 0.9
PRKCSH-211ENST00000590098 SLC12A7Q9Y666 1083 aa20.66■□□□□ 0.9
PRKCSH-211ENST00000590098 MTCH2Q9Y6C9 303 aa20.66■□□□□ 0.9
PRKCSH-211ENST00000590098 KAT6AQ92794 2004 aa20.66■□□□□ 0.9
PRKCSH-211ENST00000590098 RSPH10B2B2RC85 870 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 TNFRSF10AO00220 468 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 MEIS2O14770 477 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 LGR5O75473 907 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 RSPH10BP0C881 870 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 SMIM10L2AP0DMW4 78 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 SMIM10L2BP0DMW5 78 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 GNAT1P11488 350 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 RXRAP19793 462 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 LIFRP42702 1097 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 SEMA3FQ13275 785 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 CREB3L3Q68CJ9 461 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 TRAF7Q6Q0C0 670 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 CMTR1Q8N1G2 835 aaKnown RBP20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 RAD9AQ99638 391 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 GPR20Q99678 358 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 PSTPIP2Q9H939 334 aa20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 ZNF215Q9UL58 517 aaPredicted RBP20.65■□□□□ 0.9
PRKCSH-211ENST00000590098 MBTPS1Q14703 1052 aa20.64■□□□□ 0.89
PRKCSH-211ENST00000590098 GIMAP8Q8ND71 665 aaPredicted RBP20.64■□□□□ 0.89
PRKCSH-211ENST00000590098 SENP7Q9BQF6 1050 aa20.64■□□□□ 0.89
PRKCSH-211ENST00000590098 RNPEPQ9H4A4 650 aa20.64■□□□□ 0.89
PRKCSH-211ENST00000590098 XIRP2A4UGR9 3374 aa20.63■□□□□ 0.89
PRKCSH-211ENST00000590098 LCHNA4D1U4 455 aa20.63■□□□□ 0.89
PRKCSH-211ENST00000590098 TREHO43280 583 aa20.63■□□□□ 0.89
PRKCSH-211ENST00000590098 GJB5O95377 273 aa20.63■□□□□ 0.89
PRKCSH-211ENST00000590098 HOXC8P31273 242 aa20.63■□□□□ 0.89
PRKCSH-211ENST00000590098 SP4Q02446 784 aa20.63■□□□□ 0.89
PRKCSH-211ENST00000590098 COL9A3Q14050 684 aaPredicted RBP20.63■□□□□ 0.89
PRKCSH-211ENST00000590098 NECTIN1Q15223 517 aa20.63■□□□□ 0.89
PRKCSH-211ENST00000590098 AAK1Q2M2I8 961 aa20.63■□□□□ 0.89
PRKCSH-211ENST00000590098 UTP14CQ5TAP6 766 aaKnown RBP20.63■□□□□ 0.89
PRKCSH-211ENST00000590098 SYNE3Q6ZMZ3 975 aa20.63■□□□□ 0.89
PRKCSH-211ENST00000590098 ADAMTS19Q8TE59 1207 aa20.63■□□□□ 0.89
PRKCSH-211ENST00000590098 TFF2Q03403 129 aa20.62■□□□□ 0.89
PRKCSH-211ENST00000590098 RNF20Q5VTR2 975 aa20.62■□□□□ 0.89
PRKCSH-211ENST00000590098 FAM117BQ6P1L5 589 aa20.62■□□□□ 0.89
PRKCSH-211ENST00000590098 RAB11FIP4Q86YS3 637 aa20.62■□□□□ 0.89
PRKCSH-211ENST00000590098 CCDC82Q8N4S0 544 aa20.62■□□□□ 0.89
PRKCSH-211ENST00000590098 FANCBQ8NB91 859 aa20.62■□□□□ 0.89
PRKCSH-211ENST00000590098 DBF4BQ8NFT6 615 aa20.62■□□□□ 0.89
PRKCSH-211ENST00000590098 CDHR1Q96JP9 859 aa20.62■□□□□ 0.89
PRKCSH-211ENST00000590098 LRRC2Q9BYS8 371 aa20.62■□□□□ 0.89
PRKCSH-211ENST00000590098 SETD4Q9NVD3 440 aa20.62■□□□□ 0.89
PRKCSH-211ENST00000590098 MICAL3Q7RTP6 2002 aa20.61■□□□□ 0.89
PRKCSH-211ENST00000590098 hCG_1642624A0A1W2PR95 340 aa20.61■□□□□ 0.89
PRKCSH-211ENST00000590098 CAND2O75155 1236 aa20.61■□□□□ 0.89
PRKCSH-211ENST00000590098 AMHP03971 560 aa20.61■□□□□ 0.89
PRKCSH-211ENST00000590098 GRB10Q13322 594 aa20.61■□□□□ 0.89
PRKCSH-211ENST00000590098 TRIM50Q86XT4 487 aa20.61■□□□□ 0.89
PRKCSH-211ENST00000590098 GPRASP2Q96D09 838 aa20.61■□□□□ 0.89
PRKCSH-211ENST00000590098 UHRF1Q96T88 793 aaPredicted RBP20.61■□□□□ 0.89
PRKCSH-211ENST00000590098 TELO2Q9Y4R8 837 aa20.61■□□□□ 0.89
PRKCSH-211ENST00000590098 TCF20Q9UGU0 1960 aaKnown RBP20.61■□□□□ 0.89
PRKCSH-211ENST00000590098 SPDYE3A6NKU9 549 aa20.6■□□□□ 0.89
PRKCSH-211ENST00000590098 PLEKHG4Q58EX7 1191 aa20.6■□□□□ 0.89
PRKCSH-211ENST00000590098 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.6■□□□□ 0.89
PRKCSH-211ENST00000590098 TMTC3Q6ZXV5 915 aa20.6■□□□□ 0.89
PRKCSH-211ENST00000590098 HEATR3Q7Z4Q2 680 aa20.6■□□□□ 0.89
PRKCSH-211ENST00000590098 MICU3Q86XE3 530 aa20.6■□□□□ 0.89
PRKCSH-211ENST00000590098 SEPT8Q92599 483 aa20.6■□□□□ 0.89
PRKCSH-211ENST00000590098 TGS1Q96RS0 853 aaKnown RBP20.6■□□□□ 0.89
PRKCSH-211ENST00000590098 INSL6Q9Y581 213 aa20.6■□□□□ 0.89
PRKCSH-211ENST00000590098 COL4A4P53420 1690 aaPredicted RBP20.59■□□□□ 0.89
PRKCSH-211ENST00000590098 LPXNO60711 386 aa20.59■□□□□ 0.89
PRKCSH-211ENST00000590098 CTSHP09668 335 aa20.59■□□□□ 0.89
PRKCSH-211ENST00000590098 BMP1P13497 986 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms