RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 PDE4AP27815 886 aa16.13■□□□□ 0.17
SF3A2-205ENST00000590034 CCND2P30279 289 aa16.13■□□□□ 0.17
SF3A2-205ENST00000590034 MRPS9P82933 396 aaKnown RBP16.13■□□□□ 0.17
SF3A2-205ENST00000590034 HTRA4P83105 476 aaPredicted RBP16.13■□□□□ 0.17
SF3A2-205ENST00000590034 SEMA3FQ13275 785 aa16.13■□□□□ 0.17
SF3A2-205ENST00000590034 PLEKHG4Q58EX7 1191 aa16.13■□□□□ 0.17
SF3A2-205ENST00000590034 MYOCDQ8IZQ8 938 aa16.13■□□□□ 0.17
SF3A2-205ENST00000590034 SAMD3Q8N6K7 520 aa16.13■□□□□ 0.17
SF3A2-205ENST00000590034 ATP6V0A1Q93050 837 aa16.13■□□□□ 0.17
SF3A2-205ENST00000590034 LRFN3Q9BTN0 628 aa16.13■□□□□ 0.17
SF3A2-205ENST00000590034 TUT1Q9H6E5 874 aaKnown RBP16.13■□□□□ 0.17
SF3A2-205ENST00000590034 UBE2ZQ9H832 354 aaPredicted RBP16.13■□□□□ 0.17
SF3A2-205ENST00000590034 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.12■□□□□ 0.17
SF3A2-205ENST00000590034 C17orf102A2RUQ5 167 aa16.12■□□□□ 0.17
SF3A2-205ENST00000590034 CYP21A2P08686 494 aa16.12■□□□□ 0.17
SF3A2-205ENST00000590034 PTH1RQ03431 593 aa16.12■□□□□ 0.17
SF3A2-205ENST00000590034 TROAPQ12815 778 aa16.12■□□□□ 0.17
SF3A2-205ENST00000590034 SP7Q8TDD2 431 aaPredicted RBP16.12■□□□□ 0.17
SF3A2-205ENST00000590034 RNPEPQ9H4A4 650 aa16.12■□□□□ 0.17
SF3A2-205ENST00000590034 MLXIPQ9HAP2 919 aa16.12■□□□□ 0.17
SF3A2-205ENST00000590034 INSL6Q9Y581 213 aa16.12■□□□□ 0.17
SF3A2-205ENST00000590034 COL4A6Q14031 1691 aa16.11■□□□□ 0.17
SF3A2-205ENST00000590034 KAT6AQ92794 2004 aa16.11■□□□□ 0.17
SF3A2-205ENST00000590034 AMHP03971 560 aa16.11■□□□□ 0.17
SF3A2-205ENST00000590034 CTSHP09668 335 aa16.11■□□□□ 0.17
SF3A2-205ENST00000590034 TRIM50Q86XT4 487 aa16.11■□□□□ 0.17
SF3A2-205ENST00000590034 FBXO22Q8NEZ5 403 aa16.11■□□□□ 0.17
SF3A2-205ENST00000590034 INPP4AQ96PE3 977 aaPredicted RBP16.11■□□□□ 0.17
SF3A2-205ENST00000590034 RALGAPA2Q2PPJ7 1873 aa16.11■□□□□ 0.17
SF3A2-205ENST00000590034 PNMA6FA0A0J9YX94 578 aa16.1■□□□□ 0.17
SF3A2-205ENST00000590034 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.1■□□□□ 0.17
SF3A2-205ENST00000590034 SPATA31C2B4DYI2 1134 aa16.1■□□□□ 0.17
SF3A2-205ENST00000590034 IFIT3O14879 490 aaKnown RBP16.1■□□□□ 0.17
SF3A2-205ENST00000590034 KCNA5P22460 613 aa16.1■□□□□ 0.17
SF3A2-205ENST00000590034 ICAM3P32942 547 aa16.1■□□□□ 0.17
SF3A2-205ENST00000590034 METTL7BQ6UX53 244 aa16.1■□□□□ 0.17
SF3A2-205ENST00000590034 CYFIP1Q7L576 1253 aa16.1■□□□□ 0.17
SF3A2-205ENST00000590034 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.1■□□□□ 0.17
SF3A2-205ENST00000590034 FAM122AQ96E09 287 aa16.1■□□□□ 0.17
SF3A2-205ENST00000590034 GPR20Q99678 358 aa16.1■□□□□ 0.17
SF3A2-205ENST00000590034 SETD4Q9NVD3 440 aa16.1■□□□□ 0.17
SF3A2-205ENST00000590034 RTEL1Q9NZ71 1219 aa16.1■□□□□ 0.17
SF3A2-205ENST00000590034 FAM86C2PA6NEL3 165 aa16.09■□□□□ 0.17
SF3A2-205ENST00000590034 NOP56O00567 594 aaKnown RBP16.09■□□□□ 0.17
SF3A2-205ENST00000590034 ANTXR2P58335 489 aa16.09■□□□□ 0.17
SF3A2-205ENST00000590034 ADAM17P78536 824 aa16.09■□□□□ 0.17
SF3A2-205ENST00000590034 TRDNQ13061 729 aa16.09■□□□□ 0.17
SF3A2-205ENST00000590034 LEXMQ3ZCV2 418 aa16.09■□□□□ 0.17
SF3A2-205ENST00000590034 EPC2Q52LR7 807 aa16.09■□□□□ 0.17
SF3A2-205ENST00000590034 TTC22Q5TAA0 569 aa16.09■□□□□ 0.17
SF3A2-205ENST00000590034 PIBF1Q8WXW3 757 aa16.09■□□□□ 0.17
SF3A2-205ENST00000590034 TOP1MTQ969P6 601 aa16.09■□□□□ 0.17
SF3A2-205ENST00000590034 SUPT16HQ9Y5B9 1047 aaKnown RBP16.09■□□□□ 0.17
SF3A2-205ENST00000590034 E7EWF7 191 aa16.08■□□□□ 0.16
SF3A2-205ENST00000590034 IL9P15248 144 aa16.08■□□□□ 0.16
SF3A2-205ENST00000590034 WTAPQ15007 396 aa16.08■□□□□ 0.16
SF3A2-205ENST00000590034 GNPTABQ3T906 1256 aa16.08■□□□□ 0.16
SF3A2-205ENST00000590034 TMEM31Q5JXX7 168 aa16.08■□□□□ 0.16
SF3A2-205ENST00000590034 LMBR1Q8WVP7 490 aa16.08■□□□□ 0.16
SF3A2-205ENST00000590034 SEPT8Q92599 483 aa16.08■□□□□ 0.16
SF3A2-205ENST00000590034 MRPL38Q96DV4 380 aaKnown RBP16.08■□□□□ 0.16
SF3A2-205ENST00000590034 USP26Q9BXU7 913 aa16.08■□□□□ 0.16
SF3A2-205ENST00000590034 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
SF3A2-205ENST00000590034 MUC6Q6W4X9 2439 aa16.08■□□□□ 0.16
SF3A2-205ENST00000590034 FIBPO43427 364 aa16.07■□□□□ 0.16
SF3A2-205ENST00000590034 CAND2O75155 1236 aa16.07■□□□□ 0.16
SF3A2-205ENST00000590034 STAM2O75886 525 aa16.07■□□□□ 0.16
SF3A2-205ENST00000590034 UPP2O95045 317 aa16.07■□□□□ 0.16
SF3A2-205ENST00000590034 CHMLP26374 656 aa16.07■□□□□ 0.16
SF3A2-205ENST00000590034 TRAF1Q13077 416 aa16.07■□□□□ 0.16
SF3A2-205ENST00000590034 NEDD9Q14511 834 aa16.07■□□□□ 0.16
SF3A2-205ENST00000590034 USP17L6PQ6QN14 398 aa16.07■□□□□ 0.16
SF3A2-205ENST00000590034 FAM178BQ8IXR5 827 aa16.07■□□□□ 0.16
SF3A2-205ENST00000590034 IGDCC4Q8TDY8 1250 aa16.07■□□□□ 0.16
SF3A2-205ENST00000590034 YME1L1Q96TA2 773 aa16.07■□□□□ 0.16
SF3A2-205ENST00000590034 MYL10Q9BUA6 226 aa16.07■□□□□ 0.16
SF3A2-205ENST00000590034 ERICH2A1L162 156 aa16.06■□□□□ 0.16
SF3A2-205ENST00000590034 PI4K2BG5E9Z4 385 aa16.06■□□□□ 0.16
SF3A2-205ENST00000590034 H3BNC9 293 aa16.06■□□□□ 0.16
SF3A2-205ENST00000590034 MEIS2O14770 477 aa16.06■□□□□ 0.16
SF3A2-205ENST00000590034 GPR37L1O60883 481 aa16.06■□□□□ 0.16
SF3A2-205ENST00000590034 SP4Q02446 784 aa16.06■□□□□ 0.16
SF3A2-205ENST00000590034 COL9A3Q14050 684 aaPredicted RBP16.06■□□□□ 0.16
SF3A2-205ENST00000590034 UTP14CQ5TAP6 766 aaKnown RBP16.06■□□□□ 0.16
SF3A2-205ENST00000590034 RALYLQ86SE5 291 aaKnown RBP16.06■□□□□ 0.16
SF3A2-205ENST00000590034 MB21D2Q8IYB1 491 aaPredicted RBP16.06■□□□□ 0.16
SF3A2-205ENST00000590034 NCOA7Q8NI08 942 aa16.06■□□□□ 0.16
SF3A2-205ENST00000590034 NEK9Q8TD19 979 aa16.06■□□□□ 0.16
SF3A2-205ENST00000590034 C5orf42Q9H799 3197 aa16.06■□□□□ 0.16
SF3A2-205ENST00000590034 H3BQ06 376 aaPredicted RBP16.05■□□□□ 0.16
SF3A2-205ENST00000590034 CHRNA1P02708 482 aa16.05■□□□□ 0.16
SF3A2-205ENST00000590034 LINC00271P0C7V0 271 aa16.05■□□□□ 0.16
SF3A2-205ENST00000590034 ARHGAP4P98171 946 aa16.05■□□□□ 0.16
SF3A2-205ENST00000590034 GPM6BQ13491 265 aa16.05■□□□□ 0.16
SF3A2-205ENST00000590034 FAM26DQ5JW98 314 aa16.05■□□□□ 0.16
SF3A2-205ENST00000590034 PCNX4Q63HM2 1172 aa16.05■□□□□ 0.16
SF3A2-205ENST00000590034 PTCRAQ6ISU1 281 aaPredicted RBP16.05■□□□□ 0.16
SF3A2-205ENST00000590034 RUFY4Q6ZNE9 571 aa16.05■□□□□ 0.16
SF3A2-205ENST00000590034 CATIPQ7Z7H3 387 aa16.05■□□□□ 0.16
SF3A2-205ENST00000590034 TMEM192Q8IY95 271 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms