RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 SPATA33Q96N06 139 aa14.95□□□□□ -0.02
NEDD4L-227ENST00000590020 CLEC1BQ9P126 229 aa14.95□□□□□ -0.02
NEDD4L-227ENST00000590020 PDGFBP01127 241 aaPredicted RBP14.94□□□□□ -0.02
NEDD4L-227ENST00000590020 RB1P06400 928 aa14.94□□□□□ -0.02
NEDD4L-227ENST00000590020 SMIM10L2AP0DMW4 78 aa14.94□□□□□ -0.02
NEDD4L-227ENST00000590020 SMIM10L2BP0DMW5 78 aa14.94□□□□□ -0.02
NEDD4L-227ENST00000590020 DNAJB1P25685 340 aa14.94□□□□□ -0.02
NEDD4L-227ENST00000590020 SIGLEC14Q08ET2 396 aa14.94□□□□□ -0.02
NEDD4L-227ENST00000590020 RBM23Q86U06 439 aaKnown RBP14.94□□□□□ -0.02
NEDD4L-227ENST00000590020 RGS22Q8NE09 1264 aa14.94□□□□□ -0.02
NEDD4L-227ENST00000590020 ASIC4Q96FT7 647 aa14.94□□□□□ -0.02
NEDD4L-227ENST00000590020 C16orf70Q9BSU1 422 aa14.94□□□□□ -0.02
NEDD4L-227ENST00000590020 FSD1Q9BTV5 496 aa14.94□□□□□ -0.02
NEDD4L-227ENST00000590020 LMAN2LQ9H0V9 348 aa14.94□□□□□ -0.02
NEDD4L-227ENST00000590020 BARX2Q9UMQ3 279 aaPredicted RBP14.94□□□□□ -0.02
NEDD4L-227ENST00000590020 DDX19BQ9UMR2 479 aa14.94□□□□□ -0.02
NEDD4L-227ENST00000590020 SUPT16HQ9Y5B9 1047 aaKnown RBP14.94□□□□□ -0.02
NEDD4L-227ENST00000590020 ADGRA3Q8IWK6 1321 aa14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 DMDP11532 3685 aa14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 ORC4O43929 436 aa14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 RGS20O76081 388 aa14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 EYA4O95677 639 aa14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 MMP1P03956 469 aa14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 NR3C2P08235 984 aa14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 MYCLP12524 364 aaPredicted RBP14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 SP2Q02086 613 aa14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 CDC37Q16543 378 aaPredicted RBP14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 MYSM1Q5VVJ2 828 aa14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 GPKOWQ92917 476 aaPredicted RBP eCLIP14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 GPATCH3Q96I76 525 aa14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 IWS1Q96ST2 819 aa14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 RNPEPQ9H4A4 650 aa14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 BCAS3Q9H6U6 928 aa14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 PNMA2Q9UL42 364 aa14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 USP15Q9Y4E8 981 aaPredicted RBP14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 PCDHGC5Q9Y5F6 944 aa14.93□□□□□ -0.02
NEDD4L-227ENST00000590020 KDM4AO75164 1064 aa14.92□□□□□ -0.02
NEDD4L-227ENST00000590020 PPFIA4O75335 1185 aa14.92□□□□□ -0.02
NEDD4L-227ENST00000590020 EIF3JO75822 258 aaKnown RBP14.92□□□□□ -0.02
NEDD4L-227ENST00000590020 GGPS1O95749 300 aa14.92□□□□□ -0.02
NEDD4L-227ENST00000590020 HOXD8P13378 290 aaPredicted RBP14.92□□□□□ -0.02
NEDD4L-227ENST00000590020 NRIP1P48552 1158 aa14.92□□□□□ -0.02
NEDD4L-227ENST00000590020 RBM10P98175 930 aaKnown RBP14.92□□□□□ -0.02
NEDD4L-227ENST00000590020 CELF3Q5SZQ8 465 aaKnown RBP14.92□□□□□ -0.02
NEDD4L-227ENST00000590020 SMRP1Q8NCR6 262 aa14.92□□□□□ -0.02
NEDD4L-227ENST00000590020 PXMP2Q9NR77 195 aa14.92□□□□□ -0.02
NEDD4L-227ENST00000590020 SETD4Q9NVD3 440 aa14.92□□□□□ -0.02
NEDD4L-227ENST00000590020 ANAPC4Q9UJX5 808 aa14.92□□□□□ -0.02
NEDD4L-227ENST00000590020 PLAGL2Q9UPG8 496 aa14.92□□□□□ -0.02
NEDD4L-227ENST00000590020 SPTBN4Q9H254 2564 aa14.91□□□□□ -0.02
NEDD4L-227ENST00000590020 ABCB7O75027 752 aa14.91□□□□□ -0.02
NEDD4L-227ENST00000590020 GLP2RO95838 553 aa14.91□□□□□ -0.02
NEDD4L-227ENST00000590020 SNHG28P0DPA3 235 aa14.91□□□□□ -0.02
NEDD4L-227ENST00000590020 BTG3Q14201 252 aaPredicted RBP14.91□□□□□ -0.02
NEDD4L-227ENST00000590020 CBX2Q14781 532 aaPredicted RBP14.91□□□□□ -0.02
NEDD4L-227ENST00000590020 CLP1Q92989 425 aaKnown RBP14.91□□□□□ -0.02
NEDD4L-227ENST00000590020 ZKSCAN3Q9BRR0 538 aa14.91□□□□□ -0.02
NEDD4L-227ENST00000590020 RC3H2Q9HBD1 1191 aaKnown RBP14.91□□□□□ -0.02
NEDD4L-227ENST00000590020 RWDD3Q9Y3V2 267 aa14.91□□□□□ -0.02
NEDD4L-227ENST00000590020 KIAA1671Q9BY89 1806 aa14.91□□□□□ -0.02
NEDD4L-227ENST00000590020 ABCB11O95342 1321 aa14.91□□□□□ -0.02
NEDD4L-227ENST00000590020 H3BRB1 525 aa14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 CFBP00751 764 aa14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 ITGB1P05556 798 aa14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 FGRP09769 529 aa14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 GHRP10912 638 aa14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 UBA1P22314 1058 aaKnown RBP14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 SP100P23497 879 aaPredicted RBP14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 HOXC8P31273 242 aa14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 HAND2P61296 217 aa14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 COASYQ13057 564 aa14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 EFHBQ8N7U6 833 aa14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 OTUD7AQ8TE49 926 aaPredicted RBP14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 APBB2Q92870 758 aa14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 TUT1Q9H6E5 874 aaKnown RBP14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 TCP11L1Q9NUJ3 509 aa14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 TRPC6Q9Y210 931 aa14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 MRPL42Q9Y6G3 142 aaKnown RBP14.9□□□□□ -0.02
NEDD4L-227ENST00000590020 CACNA1AO00555 2505 aa14.89□□□□□ -0.03
NEDD4L-227ENST00000590020 PRR23AA6NEV1 266 aa14.89□□□□□ -0.03
NEDD4L-227ENST00000590020 CCER2I3L3R5 266 aa14.89□□□□□ -0.03
NEDD4L-227ENST00000590020 LGALS2P05162 132 aa14.89□□□□□ -0.03
NEDD4L-227ENST00000590020 KCNA4P22459 653 aa14.89□□□□□ -0.03
NEDD4L-227ENST00000590020 QRICH1Q2TAL8 776 aa14.89□□□□□ -0.03
NEDD4L-227ENST00000590020 MCF2L2Q86YR7 1114 aa14.89□□□□□ -0.03
NEDD4L-227ENST00000590020 ADGRF4Q8IZF3 695 aa14.89□□□□□ -0.03
NEDD4L-227ENST00000590020 IL31RAQ8NI17 732 aa14.89□□□□□ -0.03
NEDD4L-227ENST00000590020 SPPL3Q8TCT6 385 aa14.89□□□□□ -0.03
NEDD4L-227ENST00000590020 PHF7Q9BWX1 381 aaPredicted RBP14.89□□□□□ -0.03
NEDD4L-227ENST00000590020 VAT1LQ9HCJ6 419 aa14.89□□□□□ -0.03
NEDD4L-227ENST00000590020 DCHS1Q96JQ0 3298 aa14.88□□□□□ -0.03
NEDD4L-227ENST00000590020 ENPP3O14638 875 aa14.88□□□□□ -0.03
NEDD4L-227ENST00000590020 PER2O15055 1255 aa14.88□□□□□ -0.03
NEDD4L-227ENST00000590020 PPFIA3O75145 1194 aa14.88□□□□□ -0.03
NEDD4L-227ENST00000590020 CHRNA1P02708 482 aa14.88□□□□□ -0.03
NEDD4L-227ENST00000590020 MS4A1P11836 297 aa14.88□□□□□ -0.03
NEDD4L-227ENST00000590020 HNRNPUQ00839 825 aaKnown RBP eCLIP14.88□□□□□ -0.03
NEDD4L-227ENST00000590020 PAN2Q504Q3 1202 aaKnown RBP14.88□□□□□ -0.03
NEDD4L-227ENST00000590020 TRIM50Q86XT4 487 aa14.88□□□□□ -0.03
NEDD4L-227ENST00000590020 KLHL23Q8NBE8 558 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms