RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 CA3P07451 260 aa16.5■□□□□ 0.23
MBD1-220ENST00000589758 ZNF200P98182 395 aaPredicted RBP16.5■□□□□ 0.23
MBD1-220ENST00000589758 SEMA3FQ13275 785 aa16.5■□□□□ 0.23
MBD1-220ENST00000589758 COL9A3Q14050 684 aaPredicted RBP16.5■□□□□ 0.23
MBD1-220ENST00000589758 KRT32Q14532 448 aa16.5■□□□□ 0.23
MBD1-220ENST00000589758 GPNMBQ14956 572 aa16.5■□□□□ 0.23
MBD1-220ENST00000589758 TRIM71Q2Q1W2 868 aaKnown RBP16.5■□□□□ 0.23
MBD1-220ENST00000589758 ZNF618Q5T7W0 954 aa16.5■□□□□ 0.23
MBD1-220ENST00000589758 DHX32Q7L7V1 743 aaKnown RBP16.5■□□□□ 0.23
MBD1-220ENST00000589758 SERINC5Q86VE9 423 aa16.5■□□□□ 0.23
MBD1-220ENST00000589758 CCDC82Q8N4S0 544 aa16.5■□□□□ 0.23
MBD1-220ENST00000589758 GPRASP2Q96D09 838 aa16.5■□□□□ 0.23
MBD1-220ENST00000589758 GPR20Q99678 358 aa16.5■□□□□ 0.23
MBD1-220ENST00000589758 BCAS3Q9H6U6 928 aa16.5■□□□□ 0.23
MBD1-220ENST00000589758 ZNF215Q9UL58 517 aaPredicted RBP16.5■□□□□ 0.23
MBD1-220ENST00000589758 TET1Q8NFU7 2136 aa16.49■□□□□ 0.23
MBD1-220ENST00000589758 EMSYQ7Z589 1322 aa16.49■□□□□ 0.23
MBD1-220ENST00000589758 SPDYE3A6NKU9 549 aa16.49■□□□□ 0.23
MBD1-220ENST00000589758 SMIM10L2AP0DMW4 78 aa16.49■□□□□ 0.23
MBD1-220ENST00000589758 SMIM10L2BP0DMW5 78 aa16.49■□□□□ 0.23
MBD1-220ENST00000589758 GNAT1P11488 350 aa16.49■□□□□ 0.23
MBD1-220ENST00000589758 HOXC8P31273 242 aa16.49■□□□□ 0.23
MBD1-220ENST00000589758 WDR5P61964 334 aaKnown RBP16.49■□□□□ 0.23
MBD1-220ENST00000589758 IKBKEQ14164 716 aa16.49■□□□□ 0.23
MBD1-220ENST00000589758 APOA5Q6Q788 366 aa16.49■□□□□ 0.23
MBD1-220ENST00000589758 RAB11FIP4Q86YS3 637 aa16.49■□□□□ 0.23
MBD1-220ENST00000589758 TEX2Q8IWB9 1127 aa16.49■□□□□ 0.23
MBD1-220ENST00000589758 PPM1EQ8WY54 764 aa16.49■□□□□ 0.23
MBD1-220ENST00000589758 ATP6V0A1Q93050 837 aa16.49■□□□□ 0.23
MBD1-220ENST00000589758 EHMT1Q9H9B1 1298 aa16.49■□□□□ 0.23
MBD1-220ENST00000589758 MAFGO15525 162 aa16.48■□□□□ 0.23
MBD1-220ENST00000589758 TLL1O43897 1013 aa16.48■□□□□ 0.23
MBD1-220ENST00000589758 CAND2O75155 1236 aa16.48■□□□□ 0.23
MBD1-220ENST00000589758 HMGB1P09429 215 aaKnown RBP16.48■□□□□ 0.23
MBD1-220ENST00000589758 THPOP40225 353 aa16.48■□□□□ 0.23
MBD1-220ENST00000589758 EXOSC10Q01780 885 aaKnown RBP16.48■□□□□ 0.23
MBD1-220ENST00000589758 HIC1Q14526 733 aa16.48■□□□□ 0.23
MBD1-220ENST00000589758 HEATR3Q7Z4Q2 680 aa16.48■□□□□ 0.23
MBD1-220ENST00000589758 ZBED2Q9BTP6 218 aa16.48■□□□□ 0.23
MBD1-220ENST00000589758 RNPEPQ9H4A4 650 aa16.48■□□□□ 0.23
MBD1-220ENST00000589758 hCG_1642624A0A1W2PR95 340 aa16.47■□□□□ 0.23
MBD1-220ENST00000589758 RSPH10B2B2RC85 870 aa16.47■□□□□ 0.23
MBD1-220ENST00000589758 ZBTB43O43298 467 aa16.47■□□□□ 0.23
MBD1-220ENST00000589758 LGR5O75473 907 aa16.47■□□□□ 0.23
MBD1-220ENST00000589758 RSPH10BP0C881 870 aa16.47■□□□□ 0.23
MBD1-220ENST00000589758 POU3F3P20264 500 aaPredicted RBP16.47■□□□□ 0.23
MBD1-220ENST00000589758 RTN1Q16799 776 aa16.47■□□□□ 0.23
MBD1-220ENST00000589758 TJAP1Q5JTD0 557 aa16.47■□□□□ 0.23
MBD1-220ENST00000589758 UTP14CQ5TAP6 766 aaKnown RBP16.47■□□□□ 0.23
MBD1-220ENST00000589758 TRAF7Q6Q0C0 670 aa16.47■□□□□ 0.23
MBD1-220ENST00000589758 ATXN2LQ8WWM7 1075 aaKnown RBP16.47■□□□□ 0.23
MBD1-220ENST00000589758 WNT8BQ93098 351 aa16.47■□□□□ 0.23
MBD1-220ENST00000589758 TSPYL2Q9H2G4 693 aaPredicted RBP16.47■□□□□ 0.23
MBD1-220ENST00000589758 THEGQ9P2T0 379 aa16.47■□□□□ 0.23
MBD1-220ENST00000589758 PCDHA6Q9UN73 950 aa16.47■□□□□ 0.23
MBD1-220ENST00000589758 PCDHA8Q9Y5H6 950 aa16.47■□□□□ 0.23
MBD1-220ENST00000589758 MYO9BQ13459 2157 aa16.47■□□□□ 0.23
MBD1-220ENST00000589758 CNTNAP5Q8WYK1 1306 aa16.46■□□□□ 0.23
MBD1-220ENST00000589758 hCG_1984214I3L0E3 225 aa16.46■□□□□ 0.23
MBD1-220ENST00000589758 TREHO43280 583 aa16.46■□□□□ 0.23
MBD1-220ENST00000589758 GTPBP6O43824 516 aaPredicted RBP16.46■□□□□ 0.23
MBD1-220ENST00000589758 RCAN1P53805 252 aa16.46■□□□□ 0.23
MBD1-220ENST00000589758 TAP1Q03518 808 aa16.46■□□□□ 0.23
MBD1-220ENST00000589758 CCDC85BQ15834 202 aaPredicted RBP16.46■□□□□ 0.23
MBD1-220ENST00000589758 UBE2SQ16763 222 aa16.46■□□□□ 0.23
MBD1-220ENST00000589758 PPP1R18Q6NYC8 613 aa16.46■□□□□ 0.23
MBD1-220ENST00000589758 RASEFQ8IZ41 740 aa16.46■□□□□ 0.23
MBD1-220ENST00000589758 ZNF713Q8N859 430 aaPredicted RBP16.46■□□□□ 0.23
MBD1-220ENST00000589758 UBIAD1Q9Y5Z9 338 aa16.46■□□□□ 0.23
MBD1-220ENST00000589758 DOCK5Q9H7D0 1870 aa16.46■□□□□ 0.22
MBD1-220ENST00000589758 FOSP01100 380 aaPredicted RBP16.45■□□□□ 0.22
MBD1-220ENST00000589758 KCNA2P16389 499 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 ITGB5P18084 799 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 TCF7P36402 384 aaPredicted RBP16.45■□□□□ 0.22
MBD1-220ENST00000589758 NAPAP54920 295 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 DEFB103AP81534 67 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 SP4Q02446 784 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 MTMR1Q13613 665 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 MBTPS1Q14703 1052 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 ADCK5Q3MIX3 580 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 SEPT1Q8WYJ6 367 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 RAD9AQ99638 391 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 RIC8AQ9NPQ8 531 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 JADE2Q9NQC1 790 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 SETD4Q9NVD3 440 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 BRPF3Q9ULD4 1205 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 PTPRSQ13332 1948 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 NRCAMQ92823 1304 aa16.45■□□□□ 0.22
MBD1-220ENST00000589758 UNC80Q8N2C7 3258 aa16.44■□□□□ 0.22
MBD1-220ENST00000589758 KLF18A0A0U1RQI7 1052 aa16.44■□□□□ 0.22
MBD1-220ENST00000589758 ATP9AO75110 1047 aa16.44■□□□□ 0.22
MBD1-220ENST00000589758 GJB5O95377 273 aa16.44■□□□□ 0.22
MBD1-220ENST00000589758 FGD1P98174 961 aa16.44■□□□□ 0.22
MBD1-220ENST00000589758 PLEKHG4Q58EX7 1191 aa16.44■□□□□ 0.22
MBD1-220ENST00000589758 WWC2Q6AWC2 1192 aa16.44■□□□□ 0.22
MBD1-220ENST00000589758 TRIM50Q86XT4 487 aa16.44■□□□□ 0.22
MBD1-220ENST00000589758 DBF4BQ8NFT6 615 aa16.44■□□□□ 0.22
MBD1-220ENST00000589758 ARNTL2Q8WYA1 636 aa16.44■□□□□ 0.22
MBD1-220ENST00000589758 TCEANC2Q96MN5 208 aa16.44■□□□□ 0.22
MBD1-220ENST00000589758 GLT8D2Q9H1C3 349 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms