RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 ICAM3P32942 547 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 PBX2P40425 430 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 PSEN2P49810 448 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 ADCY7P51828 1080 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 AKAP17AQ02040 695 aaKnown RBP12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 MFSD10Q14728 455 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 PTGISQ16647 500 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 METTL7BQ6UX53 244 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 C7orf31Q8N865 590 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 RETREG2Q8NC44 543 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 CAGE1Q8TC20 777 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 BRF1Q92994 677 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 GPRASP2Q96D09 838 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 INPP4AQ96PE3 977 aaPredicted RBP12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 ZNF215Q9UL58 517 aaPredicted RBP12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 TCF20Q9UGU0 1960 aaKnown RBP12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 WDFY4Q6ZS81 3184 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 PTPRSQ13332 1948 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 LOXHD1Q8IVV2 1947 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 hCG_1642624A0A1W2PR95 340 aa12.14□□□□□ -0.47
CLPTM1-211ENST00000589347 PPFIA4O75335 1185 aa12.14□□□□□ -0.47
CLPTM1-211ENST00000589347 ACTN1P12814 892 aa12.14□□□□□ -0.47
CLPTM1-211ENST00000589347 CCL23P55773 120 aa12.14□□□□□ -0.47
CLPTM1-211ENST00000589347 APOBRQ0VD83 1088 aa12.14□□□□□ -0.47
CLPTM1-211ENST00000589347 AP3B2Q13367 1082 aa12.14□□□□□ -0.47
CLPTM1-211ENST00000589347 COL9A3Q14050 684 aaPredicted RBP12.14□□□□□ -0.47
CLPTM1-211ENST00000589347 KIAA0753Q2KHM9 967 aa12.14□□□□□ -0.47
CLPTM1-211ENST00000589347 MYSM1Q5VVJ2 828 aa12.14□□□□□ -0.47
CLPTM1-211ENST00000589347 WWC2Q6AWC2 1192 aa12.14□□□□□ -0.47
CLPTM1-211ENST00000589347 AFAP1L1Q8TED9 768 aa12.14□□□□□ -0.47
CLPTM1-211ENST00000589347 ALG1Q9BT22 464 aa12.14□□□□□ -0.47
CLPTM1-211ENST00000589347 GTF2IRD1Q9UHL9 959 aa12.14□□□□□ -0.47
CLPTM1-211ENST00000589347 BRPF3Q9ULD4 1205 aa12.14□□□□□ -0.47
CLPTM1-211ENST00000589347 SORBS3O60504 671 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 PARNO95453 639 aaKnown RBP12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 FOSP01100 380 aaPredicted RBP12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 FGBP02675 491 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 CYP2C9P11712 490 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 HOXD8P13378 290 aaPredicted RBP12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 MRPS9P82933 396 aaKnown RBP12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 CCDC85BQ15834 202 aaPredicted RBP12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 UBE2SQ16763 222 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 HSDL1Q3SXM5 330 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 TMEM240Q5SV17 173 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 FBXL16Q8N461 479 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 CCDC148Q8NFR7 591 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 HERVK_113Q902F9 699 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 SENP7Q9BQF6 1050 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 WNT8AQ9H1J5 351 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 RIC8AQ9NPQ8 531 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 C11orf16Q9NQ32 467 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 BARHL2Q9NY43 387 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 PCDHA6Q9UN73 950 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 PCDHA8Q9Y5H6 950 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 CYP46A1Q9Y6A2 500 aa12.13□□□□□ -0.47
CLPTM1-211ENST00000589347 UMODL1Q5DID0 1318 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 ZBBXA8MT70 800 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 GRXCR1A8MXD5 290 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 SPATA31C2B4DYI2 1134 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 LGALS2P05162 132 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 ACRP10323 421 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 SCG2P13521 617 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 CPA1P15085 419 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 MTMR1Q13613 665 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 RAB30Q15771 203 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 TMEM31Q5JXX7 168 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 MCTP2Q6DN12 878 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 CPLX2Q6PUV4 134 aaKnown RBP12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 ZNF365Q70YC5 407 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 RUFY3Q7L099 469 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 C16orf59Q7L2K0 433 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 CYFIP1Q7L576 1253 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 KAT2BQ92831 832 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 SCLYQ96I15 445 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 ZFP91Q96JP5 570 aaPredicted RBP12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 ANO3Q9BYT9 981 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 AGXT2Q9BYV1 514 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 EPHX3Q9H6B9 360 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 RTEL1Q9NZ71 1219 aa12.12□□□□□ -0.47
CLPTM1-211ENST00000589347 SIP14410 1827 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 SMCO2A6NFE2 343 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 STXBP3O00186 592 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 HAS3O00219 553 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 MAFGO15525 162 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 GNAT1P11488 350 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 CDC27P30260 824 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 KCNQ1P51787 676 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 TFF2Q03403 129 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 FUT2Q10981 343 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 PTK7Q13308 1070 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 PFKFB3Q16875 520 aaPredicted RBP12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 AAK1Q2M2I8 961 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 GDF6Q6KF10 455 aaPredicted RBP12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 TRIM22Q8IYM9 498 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 BICD2Q8TD16 824 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 SNX27Q96L92 541 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 USP26Q9BXU7 913 aa12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 RNF26Q9BY78 433 aaPredicted RBP12.11□□□□□ -0.47
CLPTM1-211ENST00000589347 TM6SF1Q9BZW5 370 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms