RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 LRRC41Q15345 812 aa16.53■□□□□ 0.24
CNN1-208ENST00000588935 Q4G0T1 1027 aa16.53■□□□□ 0.24
CNN1-208ENST00000588935 MYSM1Q5VVJ2 828 aa16.53■□□□□ 0.24
CNN1-208ENST00000588935 PPP4R3AQ6IN85 833 aa16.53■□□□□ 0.24
CNN1-208ENST00000588935 ARRDC4Q8NCT1 418 aa16.53■□□□□ 0.24
CNN1-208ENST00000588935 FERMT2Q96AC1 680 aa16.53■□□□□ 0.24
CNN1-208ENST00000588935 LENG9Q96B70 501 aa16.53■□□□□ 0.24
CNN1-208ENST00000588935 FRMPD3Q5JV73 1810 aa16.53■□□□□ 0.24
CNN1-208ENST00000588935 CAPN15O75808 1086 aa16.52■□□□□ 0.24
CNN1-208ENST00000588935 GCFC2P16383 781 aaKnown RBP16.52■□□□□ 0.24
CNN1-208ENST00000588935 CEBPZQ03701 1054 aaKnown RBP16.52■□□□□ 0.24
CNN1-208ENST00000588935 KCNA10Q16322 511 aa16.52■□□□□ 0.24
CNN1-208ENST00000588935 FSCN1Q16658 493 aaKnown RBP16.52■□□□□ 0.24
CNN1-208ENST00000588935 MOXD1Q6UVY6 613 aa16.52■□□□□ 0.24
CNN1-208ENST00000588935 BRAPQ7Z569 592 aa16.52■□□□□ 0.24
CNN1-208ENST00000588935 RNF180Q86T96 592 aa16.52■□□□□ 0.24
CNN1-208ENST00000588935 VTI1AQ96AJ9 217 aa16.52■□□□□ 0.24
CNN1-208ENST00000588935 MBOAT7Q96N66 472 aa16.52■□□□□ 0.24
CNN1-208ENST00000588935 SENP7Q9BQF6 1050 aa16.52■□□□□ 0.24
CNN1-208ENST00000588935 TMEM60Q9H2L4 133 aa16.52■□□□□ 0.24
CNN1-208ENST00000588935 OGDHLQ9ULD0 1010 aa16.52■□□□□ 0.24
CNN1-208ENST00000588935 Q9Y3F1 56 aa16.52■□□□□ 0.24
CNN1-208ENST00000588935 NOP56O00567 594 aaKnown RBP16.51■□□□□ 0.23
CNN1-208ENST00000588935 CTAGE5O15320 804 aa16.51■□□□□ 0.23
CNN1-208ENST00000588935 CHMP2AO43633 222 aa16.51■□□□□ 0.23
CNN1-208ENST00000588935 NEMFO60524 1076 aa16.51■□□□□ 0.23
CNN1-208ENST00000588935 GAS7O60861 476 aa16.51■□□□□ 0.23
CNN1-208ENST00000588935 ADAMTS4O75173 837 aa16.51■□□□□ 0.23
CNN1-208ENST00000588935 FARP2O94887 1054 aaPredicted RBP16.51■□□□□ 0.23
CNN1-208ENST00000588935 BAG4O95429 457 aaKnown RBP16.51■□□□□ 0.23
CNN1-208ENST00000588935 F13A1P00488 732 aa16.51■□□□□ 0.23
CNN1-208ENST00000588935 TXKP42681 527 aa16.51■□□□□ 0.23
CNN1-208ENST00000588935 CALCRLQ16602 461 aa16.51■□□□□ 0.23
CNN1-208ENST00000588935 HSDL1Q3SXM5 330 aa16.51■□□□□ 0.23
CNN1-208ENST00000588935 RILPL1Q5EBL4 403 aa16.51■□□□□ 0.23
CNN1-208ENST00000588935 UTP14CQ5TAP6 766 aaKnown RBP16.51■□□□□ 0.23
CNN1-208ENST00000588935 LRCH2Q5VUJ6 765 aa16.51■□□□□ 0.23
CNN1-208ENST00000588935 GIMAP8Q8ND71 665 aaPredicted RBP16.51■□□□□ 0.23
CNN1-208ENST00000588935 PPP1R13LQ8WUF5 828 aa16.51■□□□□ 0.23
CNN1-208ENST00000588935 CRISPLD2Q9H0B8 497 aa16.51■□□□□ 0.23
CNN1-208ENST00000588935 UPF3AQ9H1J1 476 aaKnown RBP16.51■□□□□ 0.23
CNN1-208ENST00000588935 TFIP11Q9UBB9 837 aaKnown RBP16.51■□□□□ 0.23
CNN1-208ENST00000588935 SLC9A2Q9UBY0 812 aa16.51■□□□□ 0.23
CNN1-208ENST00000588935 ZDHHC9Q9Y397 364 aa16.51■□□□□ 0.23
CNN1-208ENST00000588935 KBTBD13C9JR72 458 aa16.5■□□□□ 0.23
CNN1-208ENST00000588935 DHX15O43143 795 aaKnown RBP16.5■□□□□ 0.23
CNN1-208ENST00000588935 TRAPPC10P48553 1259 aa16.5■□□□□ 0.23
CNN1-208ENST00000588935 BRDTQ58F21 947 aaPredicted RBP16.5■□□□□ 0.23
CNN1-208ENST00000588935 METTL7BQ6UX53 244 aa16.5■□□□□ 0.23
CNN1-208ENST00000588935 KLHDC9Q8NEP7 349 aa16.5■□□□□ 0.23
CNN1-208ENST00000588935 ETNPPLQ8TBG4 499 aa16.5■□□□□ 0.23
CNN1-208ENST00000588935 DIS3LQ8TF46 1054 aaKnown RBP16.5■□□□□ 0.23
CNN1-208ENST00000588935 HAS1Q92839 578 aa16.5■□□□□ 0.23
CNN1-208ENST00000588935 SLC5A5Q92911 643 aa16.5■□□□□ 0.23
CNN1-208ENST00000588935 TEKT3Q9BXF9 490 aa16.5■□□□□ 0.23
CNN1-208ENST00000588935 FTOQ9C0B1 505 aaKnown RBP eCLIP16.5■□□□□ 0.23
CNN1-208ENST00000588935 ZSCAN16Q9H4T2 348 aaPredicted RBP16.5■□□□□ 0.23
CNN1-208ENST00000588935 JPH1Q9HDC5 661 aaPredicted RBP16.5■□□□□ 0.23
CNN1-208ENST00000588935 TBC1D22BQ9NU19 505 aa16.5■□□□□ 0.23
CNN1-208ENST00000588935 NFASCO94856 1347 aa16.49■□□□□ 0.23
CNN1-208ENST00000588935 ZEB2O60315 1214 aa16.49■□□□□ 0.23
CNN1-208ENST00000588935 ASGR1P07306 291 aa16.49■□□□□ 0.23
CNN1-208ENST00000588935 MMP3P08254 477 aa16.49■□□□□ 0.23
CNN1-208ENST00000588935 CPT1AP50416 773 aa16.49■□□□□ 0.23
CNN1-208ENST00000588935 PTGDRQ13258 359 aa16.49■□□□□ 0.23
CNN1-208ENST00000588935 CXCL17Q6UXB2 119 aa16.49■□□□□ 0.23
CNN1-208ENST00000588935 PAWRQ96IZ0 340 aaKnown RBP16.49■□□□□ 0.23
CNN1-208ENST00000588935 CHAMP1Q96JM3 812 aa16.49■□□□□ 0.23
CNN1-208ENST00000588935 GPR20Q99678 358 aa16.49■□□□□ 0.23
CNN1-208ENST00000588935 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.49■□□□□ 0.23
CNN1-208ENST00000588935 TCEAL9Q9UHQ7 104 aa16.49■□□□□ 0.23
CNN1-208ENST00000588935 SAMM50Q9Y512 469 aa16.49■□□□□ 0.23
CNN1-208ENST00000588935 CLIC4Q9Y696 253 aa16.49■□□□□ 0.23
CNN1-208ENST00000588935 GSTTP1A0A1W2PQM5 241 aa16.48■□□□□ 0.23
CNN1-208ENST00000588935 A6NJR5 290 aa16.48■□□□□ 0.23
CNN1-208ENST00000588935 BRD1O95696 1058 aa16.48■□□□□ 0.23
CNN1-208ENST00000588935 CCNE2O96020 404 aa16.48■□□□□ 0.23
CNN1-208ENST00000588935 ZNF286BP0CG31 522 aa16.48■□□□□ 0.23
CNN1-208ENST00000588935 PDIA4P13667 645 aaKnown RBP16.48■□□□□ 0.23
CNN1-208ENST00000588935 ACLYP53396 1101 aa16.48■□□□□ 0.23
CNN1-208ENST00000588935 ACTR2P61160 394 aa16.48■□□□□ 0.23
CNN1-208ENST00000588935 SF3A1Q15459 793 aaKnown RBP16.48■□□□□ 0.23
CNN1-208ENST00000588935 TRMT1LQ7Z2T5 733 aaKnown RBP16.48■□□□□ 0.23
CNN1-208ENST00000588935 PCSK9Q8NBP7 692 aaKnown RBP16.48■□□□□ 0.23
CNN1-208ENST00000588935 PPTC7Q8NI37 304 aa16.48■□□□□ 0.23
CNN1-208ENST00000588935 SEPT1Q8WYJ6 367 aa16.48■□□□□ 0.23
CNN1-208ENST00000588935 FAM20AQ96MK3 541 aa16.48■□□□□ 0.23
CNN1-208ENST00000588935 IPO9Q96P70 1041 aaKnown RBP16.48■□□□□ 0.23
CNN1-208ENST00000588935 SENP6Q9GZR1 1112 aaPredicted RBP16.48■□□□□ 0.23
CNN1-208ENST00000588935 UNC45AQ9H3U1 944 aa16.48■□□□□ 0.23
CNN1-208ENST00000588935 KCNMB3Q9NPA1 279 aa16.48■□□□□ 0.23
CNN1-208ENST00000588935 DNM1LO00429 736 aa16.47■□□□□ 0.23
CNN1-208ENST00000588935 PSMD10O75832 226 aa16.47■□□□□ 0.23
CNN1-208ENST00000588935 OR52Z1P0C646 297 aa16.47■□□□□ 0.23
CNN1-208ENST00000588935 TCF7P36402 384 aaPredicted RBP16.47■□□□□ 0.23
CNN1-208ENST00000588935 TECP42680 631 aa16.47■□□□□ 0.23
CNN1-208ENST00000588935 MNX1P50219 401 aaPredicted RBP16.47■□□□□ 0.23
CNN1-208ENST00000588935 PSMC6P62333 389 aa16.47■□□□□ 0.23
CNN1-208ENST00000588935 DGKDQ16760 1214 aa16.47■□□□□ 0.23
CNN1-208ENST00000588935 NCAPH2Q6IBW4 605 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms