RNA–Protein interactions for RNA: ENST00000588901.5

ATP6V0A1-220, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-220ENST00000588901 VWCEQ96DN2 955 aa20.55■□□□□ 0.88
ATP6V0A1-220ENST00000588901 ALG1Q9BT22 464 aa20.55■□□□□ 0.88
ATP6V0A1-220ENST00000588901 ZMYND12Q9H0C1 365 aa20.55■□□□□ 0.88
ATP6V0A1-220ENST00000588901 JADE2Q9NQC1 790 aa20.55■□□□□ 0.88
ATP6V0A1-220ENST00000588901 TMEM260Q9NX78 707 aa20.55■□□□□ 0.88
ATP6V0A1-220ENST00000588901 HDAC6Q9UBN7 1215 aa20.55■□□□□ 0.88
ATP6V0A1-220ENST00000588901 ATP9AO75110 1047 aa20.54■□□□□ 0.88
ATP6V0A1-220ENST00000588901 ACRP10323 421 aa20.54■□□□□ 0.88
ATP6V0A1-220ENST00000588901 SREBF1P36956 1147 aa20.54■□□□□ 0.88
ATP6V0A1-220ENST00000588901 SMAD3P84022 425 aaKnown RBP20.54■□□□□ 0.88
ATP6V0A1-220ENST00000588901 ZNF365Q70YC5 407 aa20.54■□□□□ 0.88
ATP6V0A1-220ENST00000588901 CCDC12Q8WUD4 166 aaPredicted RBP20.54■□□□□ 0.88
ATP6V0A1-220ENST00000588901 SCLYQ96I15 445 aa20.54■□□□□ 0.88
ATP6V0A1-220ENST00000588901 SLC26A6Q9BXS9 759 aa20.54■□□□□ 0.88
ATP6V0A1-220ENST00000588901 NOD1Q9Y239 953 aa20.54■□□□□ 0.88
ATP6V0A1-220ENST00000588901 TELO2Q9Y4R8 837 aa20.54■□□□□ 0.88
ATP6V0A1-220ENST00000588901 TANC1Q9C0D5 1861 aa20.54■□□□□ 0.88
ATP6V0A1-220ENST00000588901 ADAMTS3O15072 1205 aa20.53■□□□□ 0.88
ATP6V0A1-220ENST00000588901 PPFIA3O75145 1194 aa20.53■□□□□ 0.88
ATP6V0A1-220ENST00000588901 AKAP17AQ02040 695 aaKnown RBP20.53■□□□□ 0.88
ATP6V0A1-220ENST00000588901 FAM109BQ6ICB4 259 aaPredicted RBP20.53■□□□□ 0.88
ATP6V0A1-220ENST00000588901 DHX38Q92620 1227 aaKnown RBP20.53■□□□□ 0.88
ATP6V0A1-220ENST00000588901 MXRA8Q9BRK3 442 aa20.53■□□□□ 0.88
ATP6V0A1-220ENST00000588901 LARP6Q9BRS8 491 aaKnown RBP20.53■□□□□ 0.88
ATP6V0A1-220ENST00000588901 COL6A3P12111 3177 aa20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 DOCK5Q9H7D0 1870 aa20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 H3BRB1 525 aa20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 MAFGO15525 162 aa20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 EIF5BO60841 1220 aaKnown RBP20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 HOXC8P31273 242 aa20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 RBL2Q08999 1139 aa20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 BFSP2Q13515 415 aa20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 Q7L0L9 218 aa20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 DEFB123Q8N688 67 aa20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 CAGE1Q8TC20 777 aa20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 CRYGNQ8WXF5 182 aa20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 HERVK_113Q902F9 699 aa20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 TUT1Q9H6E5 874 aaKnown RBP20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 C6orf50Q9HD87 102 aa20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 CHD9Q3L8U1 2897 aa20.52■□□□□ 0.88
ATP6V0A1-220ENST00000588901 PFKMP08237 780 aa20.51■□□□□ 0.87
ATP6V0A1-220ENST00000588901 ARHGAP4P98171 946 aa20.51■□□□□ 0.87
ATP6V0A1-220ENST00000588901 HIC1Q14526 733 aa20.51■□□□□ 0.87
ATP6V0A1-220ENST00000588901 CEP55Q53EZ4 464 aa20.51■□□□□ 0.87
ATP6V0A1-220ENST00000588901 JAKMIP3Q5VZ66 844 aa20.51■□□□□ 0.87
ATP6V0A1-220ENST00000588901 MCTP2Q6DN12 878 aa20.51■□□□□ 0.87
ATP6V0A1-220ENST00000588901 TRIM50Q86XT4 487 aa20.51■□□□□ 0.87
ATP6V0A1-220ENST00000588901 REXO1Q8N1G1 1221 aaKnown RBP20.51■□□□□ 0.87
ATP6V0A1-220ENST00000588901 CCDC155Q8N6L0 562 aa20.51■□□□□ 0.87
ATP6V0A1-220ENST00000588901 CCDC148Q8NFR7 591 aa20.51■□□□□ 0.87
ATP6V0A1-220ENST00000588901 CYP2W1Q8TAV3 490 aa20.51■□□□□ 0.87
ATP6V0A1-220ENST00000588901 KCNH7Q9NS40 1196 aa20.51■□□□□ 0.87
ATP6V0A1-220ENST00000588901 CDH23Q9H251 3354 aa20.51■□□□□ 0.87
ATP6V0A1-220ENST00000588901 FGBP02675 491 aa20.5■□□□□ 0.87
ATP6V0A1-220ENST00000588901 IQCF3P0C7M6 154 aa20.5■□□□□ 0.87
ATP6V0A1-220ENST00000588901 GNA11P29992 359 aa20.5■□□□□ 0.87
ATP6V0A1-220ENST00000588901 RFC2P35250 354 aa20.5■□□□□ 0.87
ATP6V0A1-220ENST00000588901 SP4Q02446 784 aa20.5■□□□□ 0.87
ATP6V0A1-220ENST00000588901 STK3Q13188 491 aa20.5■□□□□ 0.87
ATP6V0A1-220ENST00000588901 PTK7Q13308 1070 aa20.5■□□□□ 0.87
ATP6V0A1-220ENST00000588901 TRIM22Q8IYM9 498 aa20.5■□□□□ 0.87
ATP6V0A1-220ENST00000588901 RPUSD2Q8IZ73 545 aaKnown RBP20.5■□□□□ 0.87
ATP6V0A1-220ENST00000588901 RETREG2Q8NC44 543 aa20.5■□□□□ 0.87
ATP6V0A1-220ENST00000588901 AFAP1L1Q8TED9 768 aa20.5■□□□□ 0.87
ATP6V0A1-220ENST00000588901 SH3GLB2Q9NR46 395 aa20.5■□□□□ 0.87
ATP6V0A1-220ENST00000588901 PKD2L1Q9P0L9 805 aa20.5■□□□□ 0.87
ATP6V0A1-220ENST00000588901 VPS54Q9P1Q0 977 aa20.5■□□□□ 0.87
ATP6V0A1-220ENST00000588901 MEIS1O00470 390 aa20.49■□□□□ 0.87
ATP6V0A1-220ENST00000588901 CPLX1O14810 134 aa20.49■□□□□ 0.87
ATP6V0A1-220ENST00000588901 SEC24BO95487 1268 aa20.49■□□□□ 0.87
ATP6V0A1-220ENST00000588901 SMIM10L2AP0DMW4 78 aa20.49■□□□□ 0.87
ATP6V0A1-220ENST00000588901 SMIM10L2BP0DMW5 78 aa20.49■□□□□ 0.87
ATP6V0A1-220ENST00000588901 TCF7P36402 384 aaPredicted RBP20.49■□□□□ 0.87
ATP6V0A1-220ENST00000588901 ZNF200P98182 395 aaPredicted RBP20.49■□□□□ 0.87
ATP6V0A1-220ENST00000588901 TRIM71Q2Q1W2 868 aaKnown RBP20.49■□□□□ 0.87
ATP6V0A1-220ENST00000588901 NIPA1Q7RTP0 329 aa20.49■□□□□ 0.87
ATP6V0A1-220ENST00000588901 MTMR10Q9NXD2 777 aa20.49■□□□□ 0.87
ATP6V0A1-220ENST00000588901 CXXC1Q9P0U4 656 aaPredicted RBP20.49■□□□□ 0.87
ATP6V0A1-220ENST00000588901 ZNF215Q9UL58 517 aaPredicted RBP20.49■□□□□ 0.87
ATP6V0A1-220ENST00000588901 TPCN1Q9ULQ1 816 aa20.49■□□□□ 0.87
ATP6V0A1-220ENST00000588901 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 GSTTP1A0A1W2PQM5 241 aa20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 CYP3A4P08684 503 aa20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 ARP10275 920 aa20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 SSRP1Q08945 709 aaKnown RBP20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 UTP14CQ5TAP6 766 aaKnown RBP20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 OTOP2Q7RTS6 562 aa20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 SERINC5Q86VE9 423 aa20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 BICD2Q8TD16 824 aa20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 SEPT1Q8WYJ6 367 aa20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 WNT8BQ93098 351 aa20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 MTIF3Q9H2K0 278 aaKnown RBP20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 AGO4Q9HCK5 861 aaKnown RBP20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 JPH1Q9HDC5 661 aaPredicted RBP20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 NFASCO94856 1347 aa20.48■□□□□ 0.87
ATP6V0A1-220ENST00000588901 IGLV3-22A0A075B6J6 115 aa20.47■□□□□ 0.87
ATP6V0A1-220ENST00000588901 C17orf102A2RUQ5 167 aa20.47■□□□□ 0.87
ATP6V0A1-220ENST00000588901 FAM86B1E9PN63 330 aa20.47■□□□□ 0.87
ATP6V0A1-220ENST00000588901 DEXIO95424 95 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms