RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 SSBP05455 408 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMAD4-206ENST00000588860 ALAS1P13196 640 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 BACE1P56817 501 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 UBXN2AP68543 259 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 MAP2K1Q02750 393 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-206ENST00000588860 PRKG1Q13976 671 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 ARID5BQ14865 1188 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 ECM1Q16610 540 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 VARS2Q5ST30 1063 aaKnown RBP9.8□□□□□ -0.84
SMAD4-206ENST00000588860 NOL9Q5SY16 702 aaKnown RBP9.8□□□□□ -0.84
SMAD4-206ENST00000588860 HYIQ5T013 277 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 CDKAL1Q5VV42 579 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 KCNK18Q7Z418 384 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 VSTM4Q8IW00 320 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 CPXCR1Q8N123 301 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 ADSSL1Q8N142 457 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 CCDC150Q8NCX0 1101 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 GIMAP8Q8ND71 665 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-206ENST00000588860 LENG9Q96B70 501 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 FAM20AQ96MK3 541 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 GTPBP4Q9BZE4 634 aaKnown RBP9.8□□□□□ -0.84
SMAD4-206ENST00000588860 NT5C3AQ9H0P0 336 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 SLC38A10Q9HBR0 1119 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 RAVER2Q9HCJ3 691 aaKnown RBP9.8□□□□□ -0.84
SMAD4-206ENST00000588860 ADARB2Q9NS39 739 aaKnown RBP9.8□□□□□ -0.84
SMAD4-206ENST00000588860 MAPK8IP1Q9UQF2 711 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 STK24Q9Y6E0 443 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 ADM5C9JUS6 153 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 STK25O00506 426 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 NFIBO00712 420 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 PSMA7O14818 248 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 MED24O75448 989 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 HSD17B4P51659 736 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 HMGCS2P54868 508 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 HAUS3Q68CZ6 603 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 CNNM4Q6P4Q7 775 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 UNC13DQ70J99 1090 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 DYMQ7RTS9 669 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 MCF2L2Q86YR7 1114 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 LRRC8AQ8IWT6 810 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 ZNF687Q8N1G0 1237 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 CYP2W1Q8TAV3 490 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 KIAA1524Q8TCG1 905 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 CLEC4DQ8WXI8 215 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 DCPSQ96C86 337 aaKnown RBP9.79□□□□□ -0.84
SMAD4-206ENST00000588860 NAP1L5Q96NT1 182 aaPredicted RBP9.79□□□□□ -0.84
SMAD4-206ENST00000588860 HOMER2Q9NSB8 354 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 INTS13Q9NVM9 706 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 TMOD4Q9NZQ9 345 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.79□□□□□ -0.84
SMAD4-206ENST00000588860 VAV3Q9UKW4 847 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 KIAA1024Q9UPX6 916 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 ZHX2Q9Y6X8 837 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 ARID2Q68CP9 1835 aa9.79□□□□□ -0.84
SMAD4-206ENST00000588860 MYH9P35579 1960 aaKnown RBP9.79□□□□□ -0.84
SMAD4-206ENST00000588860 IGLV3-22A0A075B6J6 115 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 PVALEFA0A1B0GWK0 134 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 TRIM49BA6NDI0 452 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 C19orf81C9J6K1 198 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 E9PMD0 336 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 PLA2G4BP0C869 781 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 FCER1AP12319 257 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 PPP1R2P41236 205 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 SPIRE1Q08AE8 756 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 NOLC1Q14978 699 aaKnown RBP eCLIP9.78□□□□□ -0.84
SMAD4-206ENST00000588860 PTPN21Q16825 1174 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 FILIP1LQ4L180 1135 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 MUM1L1Q5H9M0 696 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 PRPF38BQ5VTL8 546 aaKnown RBP9.78□□□□□ -0.84
SMAD4-206ENST00000588860 ARMCX5Q6P1M9 558 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 POTEEQ6S8J3 1075 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-206ENST00000588860 ANKRD20A12PQ8NF67 263 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.78□□□□□ -0.84
SMAD4-206ENST00000588860 ATG4CQ96DT6 458 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 DHTKD1Q96HY7 919 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-206ENST00000588860 TRIM47Q96LD4 638 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 C12orf42Q96LP6 360 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 PNMA2Q9UL42 364 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 RPTORQ8N122 1335 aa9.78□□□□□ -0.84
SMAD4-206ENST00000588860 ZNFX1Q9P2E3 1918 aaKnown RBP9.78□□□□□ -0.84
SMAD4-206ENST00000588860 A0A1B0GTH6 734 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 BICDL2A1A5D9 508 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 TMEM88BA6NKF7 163 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 KCNJ18B7U540 433 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 VWA5AO00534 786 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 GAS7O60861 476 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 USP2O75604 605 aaPredicted RBP9.77□□□□□ -0.85
SMAD4-206ENST00000588860 OFD1O75665 1012 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 FDX1P10109 184 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 IDEP14735 1019 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 SFPQP23246 707 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMAD4-206ENST00000588860 CCZ1BP86790 482 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 CCZ1P86791 482 aaPredicted RBP9.77□□□□□ -0.85
SMAD4-206ENST00000588860 SETQ01105 290 aaPredicted RBP9.77□□□□□ -0.85
SMAD4-206ENST00000588860 SPAG1Q07617 926 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 STK4Q13043 487 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 KCNJ12Q14500 433 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 KRT31Q15323 416 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 CEP55Q53EZ4 464 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms