RNA–Protein interactions for RNA: ENST00000588839.1

NFIC-205, Transcript of nuclear factor I C, humanhuman

TSL 3

Gene NFIC, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-205ENST00000588839 SPDYE3A6NKU9 549 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 EFCAB14O75071 495 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 CDC45O75419 566 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 LGALS2P05162 132 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 MYOGP15173 224 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 IGFBP4P22692 258 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 KRT32Q14532 448 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 CNKSR3Q6P9H4 555 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 TMTC3Q6ZXV5 915 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 CYFIP1Q7L576 1253 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 HERC6Q8IVU3 1022 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 SYMPKQ92797 1274 aaKnown RBP16.95■□□□□ 0.3
NFIC-205ENST00000588839 CDHR1Q96JP9 859 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 SENP7Q9BQF6 1050 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 LRRC2Q9BYS8 371 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 EHMT1Q9H9B1 1298 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 RBM28Q9NW13 759 aaKnown RBP16.95■□□□□ 0.3
NFIC-205ENST00000588839 EMSYQ7Z589 1322 aa16.95■□□□□ 0.3
NFIC-205ENST00000588839 CXCL10P02778 98 aa16.94■□□□□ 0.3
NFIC-205ENST00000588839 CA3P07451 260 aa16.94■□□□□ 0.3
NFIC-205ENST00000588839 GNAT1P11488 350 aa16.94■□□□□ 0.3
NFIC-205ENST00000588839 CMTR1Q8N1G2 835 aaKnown RBP16.94■□□□□ 0.3
NFIC-205ENST00000588839 PPM1EQ8WY54 764 aa16.94■□□□□ 0.3
NFIC-205ENST00000588839 MICAL3Q7RTP6 2002 aa16.94■□□□□ 0.3
NFIC-205ENST00000588839 ABHD14A-ACY1A0A1B0GW23 586 aa16.93■□□□□ 0.3
NFIC-205ENST00000588839 HMGB1P09429 215 aaKnown RBP16.93■□□□□ 0.3
NFIC-205ENST00000588839 IKBKEQ14164 716 aa16.93■□□□□ 0.3
NFIC-205ENST00000588839 APOA5Q6Q788 366 aa16.93■□□□□ 0.3
NFIC-205ENST00000588839 DHX32Q7L7V1 743 aaKnown RBP16.93■□□□□ 0.3
NFIC-205ENST00000588839 HEATR3Q7Z4Q2 680 aa16.93■□□□□ 0.3
NFIC-205ENST00000588839 SERINC5Q86VE9 423 aa16.93■□□□□ 0.3
NFIC-205ENST00000588839 RAB11FIP4Q86YS3 637 aa16.93■□□□□ 0.3
NFIC-205ENST00000588839 TEX2Q8IWB9 1127 aa16.93■□□□□ 0.3
NFIC-205ENST00000588839 CCDC82Q8N4S0 544 aa16.93■□□□□ 0.3
NFIC-205ENST00000588839 USP38Q8NB14 1042 aa16.93■□□□□ 0.3
NFIC-205ENST00000588839 ATP6V0A1Q93050 837 aa16.93■□□□□ 0.3
NFIC-205ENST00000588839 GPRASP2Q96D09 838 aa16.93■□□□□ 0.3
NFIC-205ENST00000588839 GPR20Q99678 358 aa16.93■□□□□ 0.3
NFIC-205ENST00000588839 TSPYL2Q9H2G4 693 aaPredicted RBP16.93■□□□□ 0.3
NFIC-205ENST00000588839 TLL1O43897 1013 aa16.92■□□□□ 0.3
NFIC-205ENST00000588839 NBNO60934 754 aa16.92■□□□□ 0.3
NFIC-205ENST00000588839 SMIM10L2AP0DMW4 78 aa16.92■□□□□ 0.3
NFIC-205ENST00000588839 SMIM10L2BP0DMW5 78 aa16.92■□□□□ 0.3
NFIC-205ENST00000588839 THPOP40225 353 aa16.92■□□□□ 0.3
NFIC-205ENST00000588839 WDR5P61964 334 aaKnown RBP16.92■□□□□ 0.3
NFIC-205ENST00000588839 ZNF200P98182 395 aaPredicted RBP16.92■□□□□ 0.3
NFIC-205ENST00000588839 SEMA3FQ13275 785 aa16.92■□□□□ 0.3
NFIC-205ENST00000588839 ADGRE1Q14246 886 aa16.92■□□□□ 0.3
NFIC-205ENST00000588839 TRIM71Q2Q1W2 868 aaKnown RBP16.92■□□□□ 0.3
NFIC-205ENST00000588839 TSGA10IPQ3SY00 556 aa16.92■□□□□ 0.3
NFIC-205ENST00000588839 ZNF618Q5T7W0 954 aa16.92■□□□□ 0.3
NFIC-205ENST00000588839 ZBED2Q9BTP6 218 aa16.92■□□□□ 0.3
NFIC-205ENST00000588839 TTC28Q96AY4 2481 aa16.91■□□□□ 0.3
NFIC-205ENST00000588839 hCG_1642624A0A1W2PR95 340 aa16.91■□□□□ 0.3
NFIC-205ENST00000588839 RSPH10B2B2RC85 870 aa16.91■□□□□ 0.3
NFIC-205ENST00000588839 ZBTB43O43298 467 aa16.91■□□□□ 0.3
NFIC-205ENST00000588839 GTPBP6O43824 516 aaPredicted RBP16.91■□□□□ 0.3
NFIC-205ENST00000588839 CAND2O75155 1236 aa16.91■□□□□ 0.3
NFIC-205ENST00000588839 RSPH10BP0C881 870 aa16.91■□□□□ 0.3
NFIC-205ENST00000588839 FGD1P98174 961 aa16.91■□□□□ 0.3
NFIC-205ENST00000588839 SP4Q02446 784 aa16.91■□□□□ 0.3
NFIC-205ENST00000588839 MTMR1Q13613 665 aa16.91■□□□□ 0.3
NFIC-205ENST00000588839 RTN1Q16799 776 aa16.91■□□□□ 0.3
NFIC-205ENST00000588839 PPP1R18Q6NYC8 613 aa16.91■□□□□ 0.3
NFIC-205ENST00000588839 THEGQ9P2T0 379 aa16.91■□□□□ 0.3
NFIC-205ENST00000588839 REV3LO60673 3130 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 hCG_1984214I3L0E3 225 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 MAFGO15525 162 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 LGR5O75473 907 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 HOXC8P31273 242 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 RCAN1P53805 252 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 EXOSC10Q01780 885 aaKnown RBP16.9■□□□□ 0.3
NFIC-205ENST00000588839 COL9A3Q14050 684 aaPredicted RBP16.9■□□□□ 0.3
NFIC-205ENST00000588839 GPNMBQ14956 572 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 UBE2SQ16763 222 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 TJAP1Q5JTD0 557 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 UTP14CQ5TAP6 766 aaKnown RBP16.9■□□□□ 0.3
NFIC-205ENST00000588839 SKAP1Q86WV1 359 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 ZNF713Q8N859 430 aaPredicted RBP16.9■□□□□ 0.3
NFIC-205ENST00000588839 ATXN2LQ8WWM7 1075 aaKnown RBP16.9■□□□□ 0.3
NFIC-205ENST00000588839 WNT8BQ93098 351 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 GLT8D2Q9H1C3 349 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 BCAS3Q9H6U6 928 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 PCDHA6Q9UN73 950 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 PCDHA8Q9Y5H6 950 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 PRRC2BQ5JSZ5 2229 aaKnown RBP16.9■□□□□ 0.3
NFIC-205ENST00000588839 CNTNAP5Q8WYK1 1306 aa16.9■□□□□ 0.3
NFIC-205ENST00000588839 SIP14410 1827 aa16.89■□□□□ 0.29
NFIC-205ENST00000588839 GOLGA8AA7E2F4 631 aa16.89■□□□□ 0.29
NFIC-205ENST00000588839 GOLGA8BA8MQT2 603 aa16.89■□□□□ 0.29
NFIC-205ENST00000588839 NAPAP54920 295 aa16.89■□□□□ 0.29
NFIC-205ENST00000588839 CCDC85BQ15834 202 aaPredicted RBP16.89■□□□□ 0.29
NFIC-205ENST00000588839 TRAF7Q6Q0C0 670 aa16.89■□□□□ 0.29
NFIC-205ENST00000588839 CCDC136Q96JN2 1154 aa16.89■□□□□ 0.29
NFIC-205ENST00000588839 RNPEPQ9H4A4 650 aa16.89■□□□□ 0.29
NFIC-205ENST00000588839 SPTBN5Q9NRC6 3674 aaKnown RBP16.89■□□□□ 0.29
NFIC-205ENST00000588839 NRCAMQ92823 1304 aa16.89■□□□□ 0.29
NFIC-205ENST00000588839 COL4A4P53420 1690 aaPredicted RBP16.88■□□□□ 0.29
NFIC-205ENST00000588839 KLF18A0A0U1RQI7 1052 aa16.88■□□□□ 0.29
NFIC-205ENST00000588839 TREHO43280 583 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms