RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 TGFB3P10600 412 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 TBC1D8BQ0IIM8 1120 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 RIOX2Q8IUF8 465 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 NELFBQ8WX92 580 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 NUCKS1Q9H1E3 243 aaKnown RBP8.28□□□□□ -1.08
ZNF554-202ENST00000588534 FBXO28Q9NVF7 368 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 SLC9A2Q9UBY0 812 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 RGPD3A6NKT7 1758 aaPredicted RBP8.28□□□□□ -1.08
ZNF554-202ENST00000588534 RGPD4Q7Z3J3 1758 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 IKBKBO14920 756 aa8.27□□□□□ -1.08
ZNF554-202ENST00000588534 NKRFO15226 690 aaKnown RBP eCLIP8.27□□□□□ -1.08
ZNF554-202ENST00000588534 PNOCQ13519 176 aa8.27□□□□□ -1.08
ZNF554-202ENST00000588534 SPATA1Q5VX52 437 aa8.27□□□□□ -1.08
ZNF554-202ENST00000588534 NEK11Q8NG66 645 aa8.27□□□□□ -1.08
ZNF554-202ENST00000588534 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.27□□□□□ -1.08
ZNF554-202ENST00000588534 KIFAP3Q92845 792 aa8.27□□□□□ -1.08
ZNF554-202ENST00000588534 INO80BQ9C086 356 aaPredicted RBP8.27□□□□□ -1.08
ZNF554-202ENST00000588534 JPH1Q9HDC5 661 aaPredicted RBP8.27□□□□□ -1.08
ZNF554-202ENST00000588534 KCNH4Q9UQ05 1017 aa8.27□□□□□ -1.08
ZNF554-202ENST00000588534 CTNND2Q9UQB3 1225 aa8.27□□□□□ -1.08
ZNF554-202ENST00000588534 PDHXO00330 501 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 FOXP2O15409 715 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 EXOC3O60645 756 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 TDP2O95551 362 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 GH1P01241 217 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 TUBB4AP04350 444 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 RDXP35241 583 aaKnown RBP8.27□□□□□ -1.09
ZNF554-202ENST00000588534 Q4G0T1 1027 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 PCNX4Q63HM2 1172 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 ZNF746Q6NUN9 644 aaPredicted RBP8.27□□□□□ -1.09
ZNF554-202ENST00000588534 UNC13DQ70J99 1090 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 TMC6Q7Z403 805 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 SOCS4Q8WXH5 440 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 SEPT1Q8WYJ6 367 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 ACCSQ96QU6 501 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 BCCIPQ9P287 314 aaKnown RBP eCLIP8.27□□□□□ -1.09
ZNF554-202ENST00000588534 FBXO2Q9UK22 296 aaPredicted RBP8.27□□□□□ -1.09
ZNF554-202ENST00000588534 NFE2L3Q9Y4A8 694 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 PPME1Q9Y570 386 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 PCDHAC2Q9Y5I4 1007 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 LY75O60449 1722 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 AK9Q5TCS8 1911 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 USP2O75604 605 aaPredicted RBP8.27□□□□□ -1.09
ZNF554-202ENST00000588534 RPLP2P05387 115 aaKnown RBP8.27□□□□□ -1.09
ZNF554-202ENST00000588534 XRCC6P12956 609 aaKnown RBP eCLIP8.27□□□□□ -1.09
ZNF554-202ENST00000588534 CYLC1P35663 651 aaPredicted RBP8.27□□□□□ -1.09
ZNF554-202ENST00000588534 STX17P56962 302 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 LAMC2Q13753 1193 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 WDR44Q5JSH3 913 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 SH3BP5LQ7L8J4 393 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 ANKRD23Q86SG2 305 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 POTEDQ86YR6 584 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 CNGA4Q8IV77 575 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 GPT2Q8TD30 523 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 RAD54LQ92698 747 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 PAGE5Q96GU1 130 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 NOC4LQ9BVI4 516 aaKnown RBP8.27□□□□□ -1.09
ZNF554-202ENST00000588534 KATNAL1Q9BW62 490 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 ASCC2Q9H1I8 757 aaPredicted RBP8.27□□□□□ -1.09
ZNF554-202ENST00000588534 ZNF302Q9NR11 478 aa8.27□□□□□ -1.09
ZNF554-202ENST00000588534 RNF216Q9NWF9 866 aaPredicted RBP8.27□□□□□ -1.09
ZNF554-202ENST00000588534 CGNQ9P2M7 1197 aaKnown RBP8.27□□□□□ -1.09
ZNF554-202ENST00000588534 EYA4O95677 639 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 CETN2P41208 172 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 HS1BP3Q53T59 392 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 XKR3Q5GH77 459 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.26□□□□□ -1.09
ZNF554-202ENST00000588534 FMR1NBQ8N0W7 255 aaPredicted RBP8.26□□□□□ -1.09
ZNF554-202ENST00000588534 FAM81BQ96LP2 452 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 BLZF1Q9H2G9 400 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 JADE2Q9NQC1 790 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 ZNF112Q9UJU3 913 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 SCAF8Q9UPN6 1271 aaKnown RBP8.26□□□□□ -1.09
ZNF554-202ENST00000588534 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.26□□□□□ -1.09
ZNF554-202ENST00000588534 MORC2Q9Y6X9 1032 aaPredicted RBP8.26□□□□□ -1.09
ZNF554-202ENST00000588534 K7ENM7 598 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 CYP3A4P08684 503 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 ERCC3P19447 782 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 LIG4P49917 911 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 IFI16Q16666 785 aaKnown RBP8.26□□□□□ -1.09
ZNF554-202ENST00000588534 CEP135Q66GS9 1140 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 KIAA1328Q86T90 577 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 METTL13Q8N6R0 699 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 WNK4Q96J92 1243 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 POLR3CQ9BUI4 534 aaPredicted RBP8.26□□□□□ -1.09
ZNF554-202ENST00000588534 TRIM6Q9C030 488 aaPredicted RBP8.26□□□□□ -1.09
ZNF554-202ENST00000588534 C2orf40Q9H1Z8 148 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 SMARCAD1Q9H4L7 1026 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 ATP6V0A4Q9HBG4 840 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 IMPACTQ9P2X3 320 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 SLC45A1Q9Y2W3 748 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 TMEM88BA6NKF7 163 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 GAS2O43903 313 aaKnown RBP8.26□□□□□ -1.09
ZNF554-202ENST00000588534 TXNP10599 105 aaKnown RBP8.26□□□□□ -1.09
ZNF554-202ENST00000588534 UBXN1Q04323 297 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 LRRC63Q05C16 580 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 SURF1Q15526 300 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 ARHGAP29Q52LW3 1261 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 SLFN12LQ6IEE8 588 aa8.26□□□□□ -1.09
ZNF554-202ENST00000588534 SYTL5Q8TDW5 730 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms