RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 SV2BQ7L1I2 683 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 CYP2W1Q8TAV3 490 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 SMCR8Q8TEV9 937 aaPredicted RBP11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 BRI3BPQ8WY22 251 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 CCDC102AQ96A19 550 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 MMTAG2Q9BU76 263 aaKnown RBP11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 TEKT3Q9BXF9 490 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 KBTBD4Q9NVX7 518 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 LOC285556D6RIA3 1793 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 SMCHD1A6NHR9 2005 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 PARP14Q460N5 1801 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 PTPRFP10586 1907 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 LOC102724159A0A0B4J2E5 919 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 TTLL13PA6NNM8 815 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 IPO5O00410 1097 aaKnown RBP11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 GAS7O60861 476 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 PSMD10O75832 226 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 ARP10275 920 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 XRCC6P12956 609 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 ITGB5P18084 799 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 PLCG1P19174 1290 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 ERCC3P19447 782 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 RPA1P27694 616 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 ZNF165P49910 485 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 GRB10Q13322 594 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 PPP2R5CQ13362 524 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 KCTD2Q14681 263 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 PWP2Q15269 919 aaKnown RBP11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 EPHA7Q15375 998 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 STXBP2Q15833 593 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 GNPTABQ3T906 1256 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 NCAPH2Q6IBW4 605 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 OTOP1Q7RTM1 612 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 MLKLQ8NB16 471 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 SPATA20Q8TB22 786 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 GPRASP2Q96D09 838 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 PARK7Q99497 189 aaKnown RBP11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 POLR3CQ9BUI4 534 aaPredicted RBP11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 TCEAL9Q9UHQ7 104 aa11.78□□□□□ -0.52
CHMP1B-202ENST00000588284 POTEMA6NI47 508 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 SMTNL1A8MU46 457 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 BECN2A8MW95 431 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 FOXN1O15353 648 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 STRNO43815 780 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 EIF3JO75822 258 aaKnown RBP11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 FCER1AP12319 257 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 ERVK-9P63128 1117 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 ERVK-24P63145 666 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 MRPS9P82933 396 aaKnown RBP11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 DPYDQ12882 1025 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 MTMR1Q13613 665 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 Q3C1V9 767 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 TMEM119Q4V9L6 283 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 NAALADL2Q58DX5 795 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 POTEEQ6S8J3 1075 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 SAPCD2Q86UD0 394 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 RNF214Q8ND24 703 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 NEK9Q8TD19 979 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 HHIPL1Q96JK4 782 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 PNMA5Q96PV4 448 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 PLIN2Q99541 437 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 C7orf25Q9BPX7 421 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 BPIFA3Q9BQP9 254 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 DNAJC25Q9H1X3 360 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 AGO4Q9HCK5 861 aaKnown RBP11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 TUFT1Q9NNX1 390 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 KCNH7Q9NS40 1196 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 MORF4L1Q9UBU8 362 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 DNM3Q9UQ16 869 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 PASKQ96RG2 1323 aa11.77□□□□□ -0.53
CHMP1B-202ENST00000588284 GOLGA6L19H0YKK7 550 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 BIN1O00499 593 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 TPM4P67936 248 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 SPIRE1Q08AE8 756 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 MKRN3Q13064 507 aaKnown RBP11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 MORC3Q14149 939 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 KCNB1Q14721 858 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 ABRAQ8N0Z2 381 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 IL31RAQ8NI17 732 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 LARP4BQ92615 738 aaKnown RBP11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 RAD54LQ92698 747 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 ERCC4Q92889 916 aaPredicted RBP11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 INPP4AQ96PE3 977 aaPredicted RBP11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 MMP19Q99542 508 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 TXNRD2Q9NNW7 524 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 MAN1B1Q9UKM7 699 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 VAV3Q9UKW4 847 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 KIAA1024Q9UPX6 916 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 TLL2Q9Y6L7 1015 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 PCNTO95613 3336 aa11.76□□□□□ -0.53
CHMP1B-202ENST00000588284 COL11A1P12107 1806 aaPredicted RBP11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 TRPM7Q96QT4 1865 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 PVALEFA0A1B0GWK0 134 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 KIF3CO14782 793 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 TOMM70O94826 608 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 RPN1P04843 607 aaKnown RBP11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 CYP2C8P10632 490 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 SFNP31947 248 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 PPP1R2P41236 205 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 ALDH5A1P51649 535 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms