RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 NBPF20Q3BBV1 942 aa17.03■□□□□ 0.32
HDAC5-207ENST00000588261 DNERQ8NFT8 737 aa17.03■□□□□ 0.32
HDAC5-207ENST00000588261 ASB2Q96Q27 587 aa17.03■□□□□ 0.32
HDAC5-207ENST00000588261 NKX2-4Q9H2Z4 354 aa17.03■□□□□ 0.32
HDAC5-207ENST00000588261 SLC28A3Q9HAS3 691 aa17.03■□□□□ 0.32
HDAC5-207ENST00000588261 PIK3CDO00329 1044 aa17.02■□□□□ 0.32
HDAC5-207ENST00000588261 FDPSP14324 419 aaKnown RBP17.02■□□□□ 0.32
HDAC5-207ENST00000588261 HSD17B4P51659 736 aa17.02■□□□□ 0.32
HDAC5-207ENST00000588261 NAPAP54920 295 aa17.02■□□□□ 0.32
HDAC5-207ENST00000588261 TTLL4Q14679 1199 aa17.02■□□□□ 0.32
HDAC5-207ENST00000588261 GALNT17Q6IS24 598 aa17.02■□□□□ 0.32
HDAC5-207ENST00000588261 RPUSD2Q8IZ73 545 aaKnown RBP17.02■□□□□ 0.32
HDAC5-207ENST00000588261 PIBF1Q8WXW3 757 aa17.02■□□□□ 0.32
HDAC5-207ENST00000588261 GPKOWQ92917 476 aaPredicted RBP eCLIP17.02■□□□□ 0.32
HDAC5-207ENST00000588261 ZMYND12Q9H0C1 365 aa17.02■□□□□ 0.32
HDAC5-207ENST00000588261 BDP1A6H8Y1 2624 aa17.02■□□□□ 0.32
HDAC5-207ENST00000588261 hCG_1642624A0A1W2PR95 340 aa17.01■□□□□ 0.31
HDAC5-207ENST00000588261 JAK2O60674 1132 aa17.01■□□□□ 0.31
HDAC5-207ENST00000588261 ARHGEF15O94989 841 aa17.01■□□□□ 0.31
HDAC5-207ENST00000588261 IGFBP4P22692 258 aa17.01■□□□□ 0.31
HDAC5-207ENST00000588261 GNA11P29992 359 aa17.01■□□□□ 0.31
HDAC5-207ENST00000588261 PDE4DQ08499 809 aa17.01■□□□□ 0.31
HDAC5-207ENST00000588261 GPNMBQ14956 572 aa17.01■□□□□ 0.31
HDAC5-207ENST00000588261 MCTP2Q6DN12 878 aa17.01■□□□□ 0.31
HDAC5-207ENST00000588261 SCFD2Q8WU76 684 aa17.01■□□□□ 0.31
HDAC5-207ENST00000588261 KAT2BQ92831 832 aa17.01■□□□□ 0.31
HDAC5-207ENST00000588261 CUL5Q93034 780 aa17.01■□□□□ 0.31
HDAC5-207ENST00000588261 MTG1Q9BT17 334 aaPredicted RBP17.01■□□□□ 0.31
HDAC5-207ENST00000588261 POLR3EQ9NVU0 708 aa17.01■□□□□ 0.31
HDAC5-207ENST00000588261 TCF20Q9UGU0 1960 aaKnown RBP17■□□□□ 0.31
HDAC5-207ENST00000588261 TXNP10599 105 aaKnown RBP17■□□□□ 0.31
HDAC5-207ENST00000588261 CPT1AP50416 773 aa17■□□□□ 0.31
HDAC5-207ENST00000588261 MRPL12P52815 198 aaKnown RBP17■□□□□ 0.31
HDAC5-207ENST00000588261 ARHGAP1Q07960 439 aa17■□□□□ 0.31
HDAC5-207ENST00000588261 LY6KQ17RY6 165 aa17■□□□□ 0.31
HDAC5-207ENST00000588261 TYW1BQ6NUM6 668 aa17■□□□□ 0.31
HDAC5-207ENST00000588261 FAM184AQ8NB25 1140 aa17■□□□□ 0.31
HDAC5-207ENST00000588261 DAGLBQ8NCG7 672 aa17■□□□□ 0.31
HDAC5-207ENST00000588261 BICD2Q8TD16 824 aa17■□□□□ 0.31
HDAC5-207ENST00000588261 ADAMTS19Q8TE59 1207 aa17■□□□□ 0.31
HDAC5-207ENST00000588261 ALG1Q9BT22 464 aa17■□□□□ 0.31
HDAC5-207ENST00000588261 PSTPIP2Q9H939 334 aa17■□□□□ 0.31
HDAC5-207ENST00000588261 C6orf50Q9HD87 102 aa17■□□□□ 0.31
HDAC5-207ENST00000588261 RIC8AQ9NPQ8 531 aa17■□□□□ 0.31
HDAC5-207ENST00000588261 SMC3Q9UQE7 1217 aa17■□□□□ 0.31
HDAC5-207ENST00000588261 TET1Q8NFU7 2136 aa16.99■□□□□ 0.31
HDAC5-207ENST00000588261 GCOM1H8Y6P7 765 aaPredicted RBP16.99■□□□□ 0.31
HDAC5-207ENST00000588261 NKRFO15226 690 aaKnown RBP eCLIP16.99■□□□□ 0.31
HDAC5-207ENST00000588261 RGS20O76081 388 aa16.99■□□□□ 0.31
HDAC5-207ENST00000588261 POLR2MP0CAP2 368 aa16.99■□□□□ 0.31
HDAC5-207ENST00000588261 ADCY7P51828 1080 aa16.99■□□□□ 0.31
HDAC5-207ENST00000588261 CCDC85BQ15834 202 aaPredicted RBP16.99■□□□□ 0.31
HDAC5-207ENST00000588261 AFG1LQ8WV93 481 aa16.99■□□□□ 0.31
HDAC5-207ENST00000588261 DHX38Q92620 1227 aaKnown RBP16.99■□□□□ 0.31
HDAC5-207ENST00000588261 UHRF1Q96T88 793 aaPredicted RBP16.99■□□□□ 0.31
HDAC5-207ENST00000588261 VPS54Q9P1Q0 977 aa16.99■□□□□ 0.31
HDAC5-207ENST00000588261 SMCO2A6NFE2 343 aa16.98■□□□□ 0.31
HDAC5-207ENST00000588261 MMP3P08254 477 aa16.98■□□□□ 0.31
HDAC5-207ENST00000588261 PDIA4P13667 645 aaKnown RBP16.98■□□□□ 0.31
HDAC5-207ENST00000588261 AP3B2Q13367 1082 aa16.98■□□□□ 0.31
HDAC5-207ENST00000588261 TRIM29Q14134 588 aa16.98■□□□□ 0.31
HDAC5-207ENST00000588261 AAK1Q2M2I8 961 aa16.98■□□□□ 0.31
HDAC5-207ENST00000588261 TCTN1Q2MV58 587 aa16.98■□□□□ 0.31
HDAC5-207ENST00000588261 NFRKBQ6P4R8 1299 aa16.98■□□□□ 0.31
HDAC5-207ENST00000588261 SEPT14Q6ZU15 432 aa16.98■□□□□ 0.31
HDAC5-207ENST00000588261 DEFB128Q7Z7B8 93 aa16.98■□□□□ 0.31
HDAC5-207ENST00000588261 PHF20Q9BVI0 1012 aa16.98■□□□□ 0.31
HDAC5-207ENST00000588261 SLC4A7Q9Y6M7 1214 aa16.98■□□□□ 0.31
HDAC5-207ENST00000588261 TANC1Q9C0D5 1861 aa16.98■□□□□ 0.31
HDAC5-207ENST00000588261 MEIS2O14770 477 aa16.97■□□□□ 0.31
HDAC5-207ENST00000588261 PPFIA3O75145 1194 aa16.97■□□□□ 0.31
HDAC5-207ENST00000588261 CFBP00751 764 aa16.97■□□□□ 0.31
HDAC5-207ENST00000588261 FOSP01100 380 aaPredicted RBP16.97■□□□□ 0.31
HDAC5-207ENST00000588261 IQCF3P0C7M6 154 aa16.97■□□□□ 0.31
HDAC5-207ENST00000588261 EIF2AK2P19525 551 aaKnown RBP16.97■□□□□ 0.31
HDAC5-207ENST00000588261 PDCP20941 246 aa16.97■□□□□ 0.31
HDAC5-207ENST00000588261 GJB2P29033 226 aa16.97■□□□□ 0.31
HDAC5-207ENST00000588261 ANP32AP39687 249 aaKnown RBP16.97■□□□□ 0.31
HDAC5-207ENST00000588261 SPRED2Q7Z698 418 aa16.97■□□□□ 0.31
HDAC5-207ENST00000588261 IL31RAQ8NI17 732 aa16.97■□□□□ 0.31
HDAC5-207ENST00000588261 C8orf76Q96K31 380 aa16.97■□□□□ 0.31
HDAC5-207ENST00000588261 MPHOSPH6Q99547 160 aaKnown RBP16.97■□□□□ 0.31
HDAC5-207ENST00000588261 DDX41Q9UJV9 622 aaKnown RBP16.97■□□□□ 0.31
HDAC5-207ENST00000588261 PCDHA4Q9UN74 947 aa16.97■□□□□ 0.31
HDAC5-207ENST00000588261 FRMPD4Q14CM0 1322 aa16.96■□□□□ 0.31
HDAC5-207ENST00000588261 REV3LO60673 3130 aa16.96■□□□□ 0.31
HDAC5-207ENST00000588261 KIAA1217Q5T5P2 1943 aa16.96■□□□□ 0.31
HDAC5-207ENST00000588261 EPOPA6NHQ4 379 aa16.96■□□□□ 0.31
HDAC5-207ENST00000588261 B4DLN1 442 aa16.96■□□□□ 0.31
HDAC5-207ENST00000588261 HSP90AA1P07900 732 aaKnown RBP16.96■□□□□ 0.31
HDAC5-207ENST00000588261 PFKMP08237 780 aa16.96■□□□□ 0.31
HDAC5-207ENST00000588261 CLK2P49760 499 aaKnown RBP16.96■□□□□ 0.31
HDAC5-207ENST00000588261 NLRP5P59047 1200 aa16.96■□□□□ 0.31
HDAC5-207ENST00000588261 HIC1Q14526 733 aa16.96■□□□□ 0.31
HDAC5-207ENST00000588261 FAM47CQ5HY64 1035 aa16.96■□□□□ 0.31
HDAC5-207ENST00000588261 PPP2R2DQ66LE6 453 aa16.96■□□□□ 0.31
HDAC5-207ENST00000588261 GDF6Q6KF10 455 aaPredicted RBP16.96■□□□□ 0.31
HDAC5-207ENST00000588261 REXO1Q8N1G1 1221 aaKnown RBP16.96■□□□□ 0.31
HDAC5-207ENST00000588261 FBXO18Q8NFZ0 1043 aa16.96■□□□□ 0.31
HDAC5-207ENST00000588261 NSUN6Q8TEA1 469 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms