RNA–Protein interactions for RNA: ENST00000588012.5

PTPRS-205, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRS, Length 5,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-205ENST00000588012 EMILIN3Q9NT22 766 aa17.31■□□□□ 0.36
PTPRS-205ENST00000588012 FEM1BQ9UK73 627 aa17.31■□□□□ 0.36
PTPRS-205ENST00000588012 SLFN14P0C7P3 912 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 LIFRP42702 1097 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 YWHAGP61981 247 aaKnown RBP eCLIP17.3■□□□□ 0.36
PTPRS-205ENST00000588012 AP3B2Q13367 1082 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 PTCH1Q13635 1447 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 SIX6OS1Q8N1H7 587 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 PLEKHG2Q9H7P9 1386 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 HOXC10Q9NYD6 342 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 KRT10P13645 584 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 MCAMP43121 646 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 EHHADHQ08426 723 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 EEF2KMTQ96G04 330 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 GOLGA8KD6RF30 607 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 GOLGA8SH3BPF8 625 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 CASQ2O14958 399 aaPredicted RBP17.3■□□□□ 0.36
PTPRS-205ENST00000588012 SRGAP2CP0DJJ0 459 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 OAS2P29728 719 aaKnown RBP17.3■□□□□ 0.36
PTPRS-205ENST00000588012 ARHGAP25P42331 645 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 CTTNQ14247 550 aaKnown RBP17.3■□□□□ 0.36
PTPRS-205ENST00000588012 FBXO40Q9UH90 709 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 CHD1O14646 1710 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 CYP27B1O15528 508 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 ARL4AP40617 200 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 UBE2TQ9NPD8 197 aaPredicted RBP17.3■□□□□ 0.36
PTPRS-205ENST00000588012 GCNT4Q9P109 453 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 PCK1P35558 622 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 DDIT3P35638 169 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 TSTA3Q13630 321 aaPredicted RBP17.3■□□□□ 0.36
PTPRS-205ENST00000588012 SMYD4Q8IYR2 804 aaPredicted RBP17.3■□□□□ 0.36
PTPRS-205ENST00000588012 GIMAP8Q8ND71 665 aaPredicted RBP17.3■□□□□ 0.36
PTPRS-205ENST00000588012 MAN1B1Q9UKM7 699 aa17.3■□□□□ 0.36
PTPRS-205ENST00000588012 SASH1O94885 1247 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 PKP1Q13835 747 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 DGKHQ86XP1 1220 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 RWDD2AQ9UIY3 292 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 LRRN2O75325 713 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 FAM83BQ5T0W9 1011 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 TBC1D9BQ66K14 1250 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 C10orf67Q8IYJ2 551 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 MSTO1Q9BUK6 570 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 UBN2Q6ZU65 1347 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 PLCG1P19174 1290 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 RASSF2P50749 326 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 CACNB3P54284 484 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 DNAJC24Q6P3W2 148 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 ARMCX2Q7L311 632 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 LMNTD2Q8IXW0 634 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 MRPL47Q9HD33 250 aaKnown RBP17.29■□□□□ 0.36
PTPRS-205ENST00000588012 PTPN22Q9Y2R2 807 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 KRT1P04264 644 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 GNAT1P11488 350 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 SLFN12LQ6IEE8 588 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 DSTYKQ6XUX3 929 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 GPT2Q8TD30 523 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 NLRP4Q96MN2 994 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 MINPP1Q9UNW1 487 aa17.29■□□□□ 0.36
PTPRS-205ENST00000588012 HEXIM1O94992 359 aaKnown RBP17.28■□□□□ 0.36
PTPRS-205ENST00000588012 NAA35Q5VZE5 725 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 APOBEC3FQ8IUX4 373 aaKnown RBP17.28■□□□□ 0.36
PTPRS-205ENST00000588012 SYNE4Q8N205 404 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 CCNYQ8ND76 341 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 SRPRBQ9Y5M8 271 aaKnown RBP17.28■□□□□ 0.36
PTPRS-205ENST00000588012 WDR46O15213 610 aaKnown RBP17.28■□□□□ 0.36
PTPRS-205ENST00000588012 ELF1P32519 619 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 ZNF449Q6P9G9 518 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 STAG1Q8WVM7 1258 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 TNS3Q68CZ2 1445 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 STXBP2Q15833 593 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 OR6B2Q6IFH4 312 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 PODNQ7Z5L7 613 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 HEXIM2Q96MH2 286 aaKnown RBP17.28■□□□□ 0.36
PTPRS-205ENST00000588012 TET3O43151 1660 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 USP17L5A8MUK1 530 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 CDC25BP30305 580 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 ANKRD13CQ8N6S4 541 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 WRNIP1Q96S55 665 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 KRT3P12035 628 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 ACTN1P12814 892 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 SF3A3Q12874 501 aaKnown RBP eCLIP17.28■□□□□ 0.367e-12■■■■□ 19.8
PTPRS-205ENST00000588012 GRAMD1CQ8IYS0 662 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 LINC00301Q8NCQ3 95 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 THAP9Q9H5L6 903 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 ZHX2Q9Y6X8 837 aa17.28■□□□□ 0.36
PTPRS-205ENST00000588012 MCF2LO15068 1137 aa17.27■□□□□ 0.36
PTPRS-205ENST00000588012 RBL2Q08999 1139 aa17.27■□□□□ 0.36
PTPRS-205ENST00000588012 TSNAXIP1Q2TAA8 658 aa17.27■□□□□ 0.36
PTPRS-205ENST00000588012 HDAC11Q96DB2 347 aa17.27■□□□□ 0.36
PTPRS-205ENST00000588012 ADCY10Q96PN6 1610 aa17.27■□□□□ 0.36
PTPRS-205ENST00000588012 BUB1BO60566 1050 aaPredicted RBP17.27■□□□□ 0.36
PTPRS-205ENST00000588012 MXI1P50539 228 aa17.27■□□□□ 0.36
PTPRS-205ENST00000588012 RBBP5Q15291 538 aaKnown RBP17.27■□□□□ 0.36
PTPRS-205ENST00000588012 STRBPQ96SI9 672 aaKnown RBP17.27■□□□□ 0.36
PTPRS-205ENST00000588012 FAM49AQ9H0Q0 323 aaPredicted RBP17.27■□□□□ 0.36
PTPRS-205ENST00000588012 TDRD3Q9H7E2 651 aaKnown RBP17.27■□□□□ 0.36
PTPRS-205ENST00000588012 KLHL14Q9P2G3 628 aa17.27■□□□□ 0.36
PTPRS-205ENST00000588012 IKBKBO14920 756 aa17.27■□□□□ 0.36
PTPRS-205ENST00000588012 RAB44Q7Z6P3 723 aaPredicted RBP17.27■□□□□ 0.36
PTPRS-205ENST00000588012 RNF139Q8WU17 664 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms