RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 Q9Y3F1 56 aa12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 MYH15Q9Y2K3 1946 aa12.13□□□□□ -0.47
SMARCA4-213ENST00000587988 NEMFO60524 1076 aa12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 MSCO60682 206 aa12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 ADAMTS4O75173 837 aa12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 FARP2O94887 1054 aaPredicted RBP12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 SGPL1O95470 568 aa12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 GJB1P08034 283 aa12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 GJA9P57773 515 aa12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 BEX3Q00994 111 aa12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 NEDD9Q14511 834 aa12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 HSDL1Q3SXM5 330 aa12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 DHX37Q8IY37 1157 aaKnown RBP12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 U2AF1L4Q8WU68 220 aaKnown RBP12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 ABHD8Q96I13 439 aa12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 MTMR9Q96QG7 549 aa12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 UPF3AQ9H1J1 476 aaKnown RBP12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 MLXIPQ9HAP2 919 aa12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 XPNPEP3Q9NQH7 507 aa12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 CLIC4Q9Y696 253 aa12.12□□□□□ -0.47
SMARCA4-213ENST00000587988 NFASCO94856 1347 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 TBX3O15119 743 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 PSMD10O75832 226 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 CCNE2O96020 404 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 C6orf222P0C671 652 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 GJA8P48165 433 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 NUCB2P80303 420 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 SP4Q02446 784 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 PTGDRQ13258 359 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 LAMC2Q13753 1193 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 LRRC41Q15345 812 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 SF3A1Q15459 793 aaKnown RBP12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 CALCRLQ16602 461 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 LRCH2Q5VUJ6 765 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 METTL7BQ6UX53 244 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 TNS4Q8IZW8 715 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 KLHDC9Q8NEP7 349 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 AFG1LQ8WV93 481 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 EMID1Q96A84 441 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 FAM20AQ96MK3 541 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 SPATA33Q96N06 139 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 USP28Q96RU2 1077 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 SDF4Q9BRK5 362 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 TMEM106CQ9BVX2 250 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 CRISPLD2Q9H0B8 497 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 AP5M1Q9H0R1 490 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 TFIP11Q9UBB9 837 aaKnown RBP12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 SLC9A2Q9UBY0 812 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 OGDHLQ9ULD0 1010 aa12.11□□□□□ -0.47
SMARCA4-213ENST00000587988 GAS7O60861 476 aa12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 MMP3P08254 477 aa12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 TXKP42681 527 aa12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 NKX3-2P78367 333 aa12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 CEBPZQ03701 1054 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 DNM1Q05193 864 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 ORC2Q13416 577 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 PTPAQ15257 358 aa12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 FSCN1Q16658 493 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 CCSAPQ6IQ19 270 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 GIMAP8Q8ND71 665 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 PPTC7Q8NI37 304 aa12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 RIT2Q99578 217 aa12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 GPR20Q99678 358 aa12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 UNC45AQ9H3U1 944 aa12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 JPH1Q9HDC5 661 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 TBC1D22BQ9NU19 505 aa12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 VAV3Q9UKW4 847 aa12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 CIZ1Q9ULV3 898 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-213ENST00000587988 BRCA2P51587 3418 aa12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 GSTTP1A0A1W2PQM5 241 aa12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 A6NJR5 290 aa12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 EML1O00423 815 aa12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 CHMP2AO43633 222 aa12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 MARCH6O60337 910 aa12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 BAG4O95429 457 aaKnown RBP12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 TFRCP02786 760 aaKnown RBP12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 OR52Z1P0C646 297 aa12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 EN2P19622 333 aaPredicted RBP12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 CST5P28325 142 aaPredicted RBP12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 ACTR2P61160 394 aa12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 ATP2C1P98194 919 aaPredicted RBP12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 KCNA10Q16322 511 aa12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 IL17AQ16552 155 aa12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 GNASQ5JWF2 1037 aa12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 B3GNT9Q6UX72 402 aa12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 SLFN12Q8IYM2 578 aa12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 TEKT3Q9BXF9 490 aa12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 TTC12Q9H892 705 aaPredicted RBP12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 SPC25Q9HBM1 224 aa12.09□□□□□ -0.47
SMARCA4-213ENST00000587988 CCDC85CA6NKD9 419 aa12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 NOP56O00567 594 aaKnown RBP12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 ATG7O95352 703 aa12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 ASGR1P07306 291 aa12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 MYL3P08590 195 aa12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 HOXD8P13378 290 aaPredicted RBP12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 TECP42680 631 aa12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 CPT1AP50416 773 aa12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 SPIRE1Q08AE8 756 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms