RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 SCG2P13521 617 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 WEE1P30291 646 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 SARSP49591 514 aaKnown RBP6.49□□□□□ -1.37
SDF2-206ENST00000587788 EPHA4P54764 986 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 NLRP5P59047 1200 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 FANCCQ00597 558 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 HSP90AA2PQ14568 343 aaPredicted RBP6.49□□□□□ -1.37
SDF2-206ENST00000587788 NCAPHQ15003 741 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 SYCP1Q15431 976 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 PFKFB3Q16875 520 aaPredicted RBP6.49□□□□□ -1.37
SDF2-206ENST00000587788 SUPT20HL1Q3ZLR7 823 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 CERKLQ49MI3 558 aaPredicted RBP6.49□□□□□ -1.37
SDF2-206ENST00000587788 FAM47AQ5JRC9 791 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 RCSD1Q6JBY9 416 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.49□□□□□ -1.37
SDF2-206ENST00000587788 MIGA2Q7L4E1 593 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 TAS1R3Q7RTX0 852 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 ARMC9Q7Z3E5 817 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 SPATA20Q8TB22 786 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 ENOX1Q8TC92 643 aaKnown RBP6.49□□□□□ -1.37
SDF2-206ENST00000587788 CCDC12Q8WUD4 166 aaPredicted RBP6.49□□□□□ -1.37
SDF2-206ENST00000587788 CACTINQ8WUQ7 758 aaKnown RBP6.49□□□□□ -1.37
SDF2-206ENST00000587788 SMARCE1Q969G3 411 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 GSDMAQ96QA5 445 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 PRKD2Q9BZL6 878 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 PDCL3Q9H2J4 239 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 CXXC1Q9P0U4 656 aaPredicted RBP6.49□□□□□ -1.37
SDF2-206ENST00000587788 CNTNAP5Q8WYK1 1306 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 PARP14Q460N5 1801 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 BIN1O00499 593 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 POLR2DO15514 142 aaKnown RBP6.48□□□□□ -1.37
SDF2-206ENST00000587788 PPP1R12BO60237 982 aaPredicted RBP6.48□□□□□ -1.37
SDF2-206ENST00000587788 PRDM1O75626 825 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 TTLL1O95922 423 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 SERPINC1P01008 464 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 MYL1P05976 194 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 CYP2D6P10635 497 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 SFPQP23246 707 aaKnown RBP eCLIP6.48□□□□□ -1.37
SDF2-206ENST00000587788 INPP5BP32019 993 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 MAP2K2P36507 400 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 LONP1P36776 959 aaKnown RBP6.48□□□□□ -1.37
SDF2-206ENST00000587788 TXLNAP40222 546 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 GDF10P55107 478 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 ATP2C1P98194 919 aaPredicted RBP6.48□□□□□ -1.37
SDF2-206ENST00000587788 NOGQ13253 232 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 ORC2Q13416 577 aaPredicted RBP6.48□□□□□ -1.37
SDF2-206ENST00000587788 NNTQ13423 1086 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 VGLL4Q14135 290 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 MORC3Q14149 939 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 GRM4Q14833 912 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 TPD52L1Q16890 204 aaPredicted RBP6.48□□□□□ -1.37
SDF2-206ENST00000587788 TTC38Q5R3I4 469 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 CYP2U1Q7Z449 544 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 FCHSD1Q86WN1 690 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 SRBD1Q8N5C6 995 aaKnown RBP6.48□□□□□ -1.37
SDF2-206ENST00000587788 IQUBQ8NA54 791 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 KDF1Q8NAX2 398 aaPredicted RBP6.48□□□□□ -1.37
SDF2-206ENST00000587788 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.48□□□□□ -1.37
SDF2-206ENST00000587788 DAGLBQ8NCG7 672 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.48□□□□□ -1.37
SDF2-206ENST00000587788 SNIP1Q8TAD8 396 aaKnown RBP6.48□□□□□ -1.37
SDF2-206ENST00000587788 TNFRSF25Q93038 417 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 ZKSCAN4Q969J2 545 aaPredicted RBP6.48□□□□□ -1.37
SDF2-206ENST00000587788 DYNLL2Q96FJ2 89 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 WNK4Q96J92 1243 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 CLIC6Q96NY7 704 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 CSRNP1Q96S65 589 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 XPO4Q9C0E2 1151 aaKnown RBP6.48□□□□□ -1.37
SDF2-206ENST00000587788 ELP3Q9H9T3 547 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.48□□□□□ -1.37
SDF2-206ENST00000587788 ETNK1Q9HBU6 452 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 IL17RBQ9NRM6 502 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 RMND1Q9NWS8 449 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 TOR4AQ9NXH8 423 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 PGPEP1Q9NXJ5 209 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 MTMR4Q9NYA4 1195 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 IFNKQ9P0W0 207 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 VPS54Q9P1Q0 977 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 NYAP2Q9P242 653 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.48□□□□□ -1.37
SDF2-206ENST00000587788 NRBP1Q9UHY1 535 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 PCDHB6Q9Y5E3 794 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 PCDHA5Q9Y5H7 936 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 SNCAIPQ9Y6H5 919 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 GREB1LQ9C091 1923 aaPredicted RBP6.48□□□□□ -1.37
SDF2-206ENST00000587788 MYH4Q9Y623 1939 aa6.48□□□□□ -1.37
SDF2-206ENST00000587788 GOLGA6L9A6NEM1 432 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 hCG_1984214I3L0E3 225 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 PLEKHA8P1O95397 391 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 STAU1O95793 577 aaKnown RBP6.47□□□□□ -1.37
SDF2-206ENST00000587788 ALDH1A1P00352 501 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 GNRH1P01148 92 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 INHAP05111 366 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 HSPA8P11142 646 aaKnown RBP6.47□□□□□ -1.37
SDF2-206ENST00000587788 HOXA7P31268 230 aaPredicted RBP6.47□□□□□ -1.37
SDF2-206ENST00000587788 IREB2P48200 963 aaKnown RBP6.47□□□□□ -1.37
SDF2-206ENST00000587788 LBX1P52954 281 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 UBASH3AP57075 661 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 PRR20EP86478 221 aa6.47□□□□□ -1.37
SDF2-206ENST00000587788 PRR20CP86479 221 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms