RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 CALM1P0DP23 149 aa21.64■■□□□ 1.05
TRIM47-205ENST00000587774 CALM2P0DP24 149 aa21.64■■□□□ 1.05
TRIM47-205ENST00000587774 CALM3P0DP25 149 aa21.64■■□□□ 1.05
TRIM47-205ENST00000587774 PCNX4Q63HM2 1172 aa21.64■■□□□ 1.05
TRIM47-205ENST00000587774 TRAF7Q6Q0C0 670 aa21.64■■□□□ 1.05
TRIM47-205ENST00000587774 HERC6Q8IVU3 1022 aa21.64■■□□□ 1.05
TRIM47-205ENST00000587774 SLC12A7Q9Y666 1083 aa21.64■■□□□ 1.05
TRIM47-205ENST00000587774 hCG_1642624A0A1W2PR95 340 aa21.63■■□□□ 1.05
TRIM47-205ENST00000587774 SPATA31C2B4DYI2 1134 aa21.63■■□□□ 1.05
TRIM47-205ENST00000587774 NOP56O00567 594 aaKnown RBP21.63■■□□□ 1.05
TRIM47-205ENST00000587774 PARNO95453 639 aaKnown RBP21.63■■□□□ 1.05
TRIM47-205ENST00000587774 CXCL10P02778 98 aa21.63■■□□□ 1.05
TRIM47-205ENST00000587774 WDR5P61964 334 aaKnown RBP21.63■■□□□ 1.05
TRIM47-205ENST00000587774 TCTN1Q2MV58 587 aa21.63■■□□□ 1.05
TRIM47-205ENST00000587774 ZNF618Q5T7W0 954 aa21.63■■□□□ 1.05
TRIM47-205ENST00000587774 CNKSR3Q6P9H4 555 aa21.63■■□□□ 1.05
TRIM47-205ENST00000587774 METTL7BQ6UX53 244 aa21.63■■□□□ 1.05
TRIM47-205ENST00000587774 CYFIP1Q7L576 1253 aa21.63■■□□□ 1.05
TRIM47-205ENST00000587774 MICU3Q86XE3 530 aa21.63■■□□□ 1.05
TRIM47-205ENST00000587774 KIAA1671Q9BY89 1806 aa21.63■■□□□ 1.05
TRIM47-205ENST00000587774 BDP1A6H8Y1 2624 aa21.63■■□□□ 1.05
TRIM47-205ENST00000587774 H3BRB1 525 aa21.62■■□□□ 1.05
TRIM47-205ENST00000587774 ARHGEF15O94989 841 aa21.62■■□□□ 1.05
TRIM47-205ENST00000587774 KCNJ6P48051 423 aa21.62■■□□□ 1.05
TRIM47-205ENST00000587774 NEDD9Q14511 834 aa21.62■■□□□ 1.05
TRIM47-205ENST00000587774 MBTPS1Q14703 1052 aa21.62■■□□□ 1.05
TRIM47-205ENST00000587774 CCDC85BQ15834 202 aaPredicted RBP21.62■■□□□ 1.05
TRIM47-205ENST00000587774 TMTC3Q6ZXV5 915 aa21.62■■□□□ 1.05
TRIM47-205ENST00000587774 TMCO2Q7Z6W1 182 aaPredicted RBP21.62■■□□□ 1.05
TRIM47-205ENST00000587774 SGMS1Q86VZ5 419 aa21.62■■□□□ 1.05
TRIM47-205ENST00000587774 TUT1Q9H6E5 874 aaKnown RBP21.62■■□□□ 1.05
TRIM47-205ENST00000587774 TELO2Q9Y4R8 837 aa21.62■■□□□ 1.05
TRIM47-205ENST00000587774 HOXC8P31273 242 aa21.61■■□□□ 1.05
TRIM47-205ENST00000587774 DEFB103AP81534 67 aa21.61■■□□□ 1.05
TRIM47-205ENST00000587774 RNF20Q5VTR2 975 aa21.61■■□□□ 1.05
TRIM47-205ENST00000587774 SERINC5Q86VE9 423 aa21.61■■□□□ 1.05
TRIM47-205ENST00000587774 TRIM50Q86XT4 487 aa21.61■■□□□ 1.05
TRIM47-205ENST00000587774 CCDC82Q8N4S0 544 aa21.61■■□□□ 1.05
TRIM47-205ENST00000587774 GPR20Q99678 358 aa21.61■■□□□ 1.05
TRIM47-205ENST00000587774 CERS4Q9HA82 394 aa21.61■■□□□ 1.05
TRIM47-205ENST00000587774 CNTNAP5Q8WYK1 1306 aa21.6■■□□□ 1.05
TRIM47-205ENST00000587774 C17orf102A2RUQ5 167 aa21.6■■□□□ 1.05
TRIM47-205ENST00000587774 SMIM10L2AP0DMW4 78 aa21.6■■□□□ 1.05
TRIM47-205ENST00000587774 SMIM10L2BP0DMW5 78 aa21.6■■□□□ 1.05
TRIM47-205ENST00000587774 TAP1Q03518 808 aa21.6■■□□□ 1.05
TRIM47-205ENST00000587774 UBE2SQ16763 222 aa21.6■■□□□ 1.05
TRIM47-205ENST00000587774 XRRA1Q6P2D8 792 aa21.6■■□□□ 1.05
TRIM47-205ENST00000587774 FANCBQ8NB91 859 aa21.6■■□□□ 1.05
TRIM47-205ENST00000587774 ATP6V0A1Q93050 837 aa21.6■■□□□ 1.05
TRIM47-205ENST00000587774 PSTPIP2Q9H939 334 aa21.6■■□□□ 1.05
TRIM47-205ENST00000587774 THEGQ9P2T0 379 aa21.6■■□□□ 1.05
TRIM47-205ENST00000587774 EPOPA6NHQ4 379 aa21.59■■□□□ 1.05
TRIM47-205ENST00000587774 KIF28PB7ZC32 967 aa21.59■■□□□ 1.05
TRIM47-205ENST00000587774 RFXAPO00287 272 aa21.59■■□□□ 1.05
TRIM47-205ENST00000587774 TLL1O43897 1013 aa21.59■■□□□ 1.05
TRIM47-205ENST00000587774 SP4Q02446 784 aa21.59■■□□□ 1.05
TRIM47-205ENST00000587774 TJAP1Q5JTD0 557 aa21.59■■□□□ 1.05
TRIM47-205ENST00000587774 APOA5Q6Q788 366 aa21.59■■□□□ 1.05
TRIM47-205ENST00000587774 TCEANC2Q96MN5 208 aa21.59■■□□□ 1.05
TRIM47-205ENST00000587774 NEK1Q96PY6 1258 aa21.59■■□□□ 1.05
TRIM47-205ENST00000587774 USP26Q9BXU7 913 aa21.59■■□□□ 1.05
TRIM47-205ENST00000587774 LCHNA4D1U4 455 aa21.58■■□□□ 1.05
TRIM47-205ENST00000587774 TREHO43280 583 aa21.58■■□□□ 1.05
TRIM47-205ENST00000587774 THPOP40225 353 aa21.58■■□□□ 1.05
TRIM47-205ENST00000587774 HEATR3Q7Z4Q2 680 aa21.58■■□□□ 1.05
TRIM47-205ENST00000587774 SPRED2Q7Z698 418 aa21.58■■□□□ 1.05
TRIM47-205ENST00000587774 MICALL1Q8N3F8 863 aa21.58■■□□□ 1.05
TRIM47-205ENST00000587774 SENP7Q9BQF6 1050 aa21.58■■□□□ 1.05
TRIM47-205ENST00000587774 RNPEPQ9H4A4 650 aa21.58■■□□□ 1.05
TRIM47-205ENST00000587774 EMSYQ7Z589 1322 aa21.57■■□□□ 1.04
TRIM47-205ENST00000587774 ABHD14A-ACY1A0A1B0GW23 586 aa21.57■■□□□ 1.04
TRIM47-205ENST00000587774 ADCK5Q3MIX3 580 aa21.57■■□□□ 1.04
TRIM47-205ENST00000587774 NLRX1Q86UT6 975 aa21.57■■□□□ 1.04
TRIM47-205ENST00000587774 RASEFQ8IZ41 740 aa21.57■■□□□ 1.04
TRIM47-205ENST00000587774 ARNTL2Q8WYA1 636 aa21.57■■□□□ 1.04
TRIM47-205ENST00000587774 SYMPKQ92797 1274 aaKnown RBP21.57■■□□□ 1.04
TRIM47-205ENST00000587774 GPRASP2Q96D09 838 aa21.57■■□□□ 1.04
TRIM47-205ENST00000587774 ZNF215Q9UL58 517 aaPredicted RBP21.57■■□□□ 1.04
TRIM47-205ENST00000587774 RSPH10B2B2RC85 870 aa21.56■■□□□ 1.04
TRIM47-205ENST00000587774 ATP9AO75110 1047 aa21.56■■□□□ 1.04
TRIM47-205ENST00000587774 CDC45O75419 566 aa21.56■■□□□ 1.04
TRIM47-205ENST00000587774 LGR5O75473 907 aa21.56■■□□□ 1.04
TRIM47-205ENST00000587774 RSPH10BP0C881 870 aa21.56■■□□□ 1.04
TRIM47-205ENST00000587774 KCNA2P16389 499 aa21.56■■□□□ 1.04
TRIM47-205ENST00000587774 ITGB5P18084 799 aa21.56■■□□□ 1.04
TRIM47-205ENST00000587774 EXOSC10Q01780 885 aaKnown RBP21.56■■□□□ 1.04
TRIM47-205ENST00000587774 IKBKEQ14164 716 aa21.56■■□□□ 1.04
TRIM47-205ENST00000587774 UTP14CQ5TAP6 766 aaKnown RBP21.56■■□□□ 1.04
TRIM47-205ENST00000587774 SYNE3Q6ZMZ3 975 aa21.56■■□□□ 1.04
TRIM47-205ENST00000587774 BRPF3Q9ULD4 1205 aa21.56■■□□□ 1.04
TRIM47-205ENST00000587774 COL4A6Q14031 1691 aa21.56■■□□□ 1.04
TRIM47-205ENST00000587774 SPDYE3A6NKU9 549 aa21.55■■□□□ 1.04
TRIM47-205ENST00000587774 EFCAB14O75071 495 aa21.55■■□□□ 1.04
TRIM47-205ENST00000587774 GJB5O95377 273 aa21.55■■□□□ 1.04
TRIM47-205ENST00000587774 WWC2Q6AWC2 1192 aa21.55■■□□□ 1.04
TRIM47-205ENST00000587774 GIMAP8Q8ND71 665 aaPredicted RBP21.55■■□□□ 1.04
TRIM47-205ENST00000587774 LMBR1Q8WVP7 490 aa21.55■■□□□ 1.04
TRIM47-205ENST00000587774 ATXN2LQ8WWM7 1075 aaKnown RBP21.55■■□□□ 1.04
TRIM47-205ENST00000587774 ZBED2Q9BTP6 218 aa21.55■■□□□ 1.04
TRIM47-205ENST00000587774 SETD4Q9NVD3 440 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms