RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 CREG2Q8IUH2 290 aa21.9■■□□□ 1.1
MBD1-216ENST00000587605 ERMNQ8TAM6 284 aa21.9■■□□□ 1.1
MBD1-216ENST00000587605 GOLGA5Q8TBA6 731 aa21.9■■□□□ 1.1
MBD1-216ENST00000587605 COG1Q8WTW3 980 aa21.9■■□□□ 1.1
MBD1-216ENST00000587605 ZDHHC15Q96MV8 337 aa21.9■■□□□ 1.1
MBD1-216ENST00000587605 NOX5Q96PH1 765 aa21.9■■□□□ 1.1
MBD1-216ENST00000587605 KIAA1024Q9UPX6 916 aa21.9■■□□□ 1.1
MBD1-216ENST00000587605 KCNMA1Q12791 1236 aa21.89■■□□□ 1.09
MBD1-216ENST00000587605 CCNI2Q6ZMN8 369 aaPredicted RBP21.89■■□□□ 1.09
MBD1-216ENST00000587605 TEX2Q8IWB9 1127 aa21.89■■□□□ 1.09
MBD1-216ENST00000587605 TRIM59Q8IWR1 403 aa21.89■■□□□ 1.09
MBD1-216ENST00000587605 PCDHA1Q9Y5I3 950 aa21.89■■□□□ 1.09
MBD1-216ENST00000587605 CAPN6Q9Y6Q1 641 aa21.89■■□□□ 1.09
MBD1-216ENST00000587605 G3V3G9 751 aa21.88■■□□□ 1.09
MBD1-216ENST00000587605 PDE2AO00408 941 aaPredicted RBP21.88■■□□□ 1.09
MBD1-216ENST00000587605 SSBP05455 408 aaKnown RBP eCLIP21.88■■□□□ 1.09
MBD1-216ENST00000587605 SLC1A4P43007 532 aa21.88■■□□□ 1.09
MBD1-216ENST00000587605 TNNT3P45378 269 aaPredicted RBP21.88■■□□□ 1.09
MBD1-216ENST00000587605 HDLBPQ00341 1268 aaKnown RBP21.88■■□□□ 1.09
MBD1-216ENST00000587605 DCAF8Q5TAQ9 597 aa21.88■■□□□ 1.09
MBD1-216ENST00000587605 MEX3CQ5U5Q3 659 aaKnown RBP21.88■■□□□ 1.09
MBD1-216ENST00000587605 KCTD17Q8N5Z5 321 aa21.88■■□□□ 1.09
MBD1-216ENST00000587605 OSBPL9Q96SU4 736 aa21.88■■□□□ 1.09
MBD1-216ENST00000587605 TRPC5Q9UL62 973 aaPredicted RBP21.88■■□□□ 1.09
MBD1-216ENST00000587605 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.88■■□□□ 1.092e-6■■□□□ 12
MBD1-216ENST00000587605 MOCS3O95396 460 aa21.88■■□□□ 1.09
MBD1-216ENST00000587605 FOSP01100 380 aaPredicted RBP21.88■■□□□ 1.09
MBD1-216ENST00000587605 CRKP46108 304 aa21.88■■□□□ 1.09
MBD1-216ENST00000587605 LMAN1P49257 510 aa21.88■■□□□ 1.09
MBD1-216ENST00000587605 HNRNPH2P55795 449 aaKnown RBP21.88■■□□□ 1.09
MBD1-216ENST00000587605 CDC37Q16543 378 aaPredicted RBP21.88■■□□□ 1.09
MBD1-216ENST00000587605 HGSNATQ68CP4 663 aa21.88■■□□□ 1.09
MBD1-216ENST00000587605 MLXIPQ9HAP2 919 aa21.88■■□□□ 1.09
MBD1-216ENST00000587605 HPCAL4Q9UM19 191 aa21.88■■□□□ 1.09
MBD1-216ENST00000587605 FAN1Q9Y2M0 1017 aa21.88■■□□□ 1.09
MBD1-216ENST00000587605 ZNF185O15231 689 aa21.87■■□□□ 1.09
MBD1-216ENST00000587605 CYP11B2P19099 503 aa21.87■■□□□ 1.09
MBD1-216ENST00000587605 PAFAH1B1P43034 410 aa21.87■■□□□ 1.09
MBD1-216ENST00000587605 SCNN1DP51172 638 aa21.87■■□□□ 1.09
MBD1-216ENST00000587605 Q4G0T1 1027 aa21.87■■□□□ 1.09
MBD1-216ENST00000587605 HERC4Q5GLZ8 1057 aaPredicted RBP21.87■■□□□ 1.09
MBD1-216ENST00000587605 FAM83BQ5T0W9 1011 aa21.87■■□□□ 1.09
MBD1-216ENST00000587605 SLFN13Q68D06 897 aa21.87■■□□□ 1.09
MBD1-216ENST00000587605 GOLGA6L1Q8N7Z2 621 aa21.87■■□□□ 1.09
MBD1-216ENST00000587605 KCTD10Q9H3F6 313 aa21.87■■□□□ 1.09
MBD1-216ENST00000587605 EMILIN3Q9NT22 766 aa21.87■■□□□ 1.09
MBD1-216ENST00000587605 PI4KBQ9UBF8 816 aa21.87■■□□□ 1.09
MBD1-216ENST00000587605 E9PMD0 336 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 CETN3O15182 167 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 KRT18P05783 430 aaKnown RBP21.86■■□□□ 1.09
MBD1-216ENST00000587605 TDRD12Q587J7 1177 aaKnown RBP21.86■■□□□ 1.09
MBD1-216ENST00000587605 CCDC181Q5TID7 509 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 LEKR1Q6ZMV7 388 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 PODNQ7Z5L7 613 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 GLIS3Q8NEA6 775 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 LSM14BQ9BX40 385 aaKnown RBP21.86■■□□□ 1.09
MBD1-216ENST00000587605 IDI2Q9BXS1 227 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 ADAMTSL1Q8N6G6 1762 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 A0A0U1RQG5 324 aaPredicted RBP21.86■■□□□ 1.09
MBD1-216ENST00000587605 RPS6KA5O75582 802 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 NOL4O94818 638 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 ACTN2P35609 894 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 SLC12A3P55017 1021 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 CERKLQ49MI3 558 aaPredicted RBP21.86■■□□□ 1.09
MBD1-216ENST00000587605 GLE1Q53GS7 698 aaKnown RBP21.86■■□□□ 1.09
MBD1-216ENST00000587605 SCFD1Q8WVM8 642 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 CRYGNQ8WXF5 182 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 FAM20AQ96MK3 541 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 CRACR2AQ9BSW2 395 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 AMNQ9BXJ7 453 aa21.86■■□□□ 1.09
MBD1-216ENST00000587605 SIPA1L1O43166 1804 aa21.85■■□□□ 1.09
MBD1-216ENST00000587605 POTEB3A0JP26 581 aa21.85■■□□□ 1.09
MBD1-216ENST00000587605 POTECB2RU33 542 aa21.85■■□□□ 1.09
MBD1-216ENST00000587605 IVLP07476 585 aa21.85■■□□□ 1.09
MBD1-216ENST00000587605 EEF2P13639 858 aaKnown RBP21.85■■□□□ 1.09
MBD1-216ENST00000587605 PDE6BP35913 854 aa21.85■■□□□ 1.09
MBD1-216ENST00000587605 C2orf54Q08AI8 447 aa21.85■■□□□ 1.09
MBD1-216ENST00000587605 ZSCAN26Q16670 478 aa21.85■■□□□ 1.09
MBD1-216ENST00000587605 POTEBQ6S5H4 581 aa21.85■■□□□ 1.09
MBD1-216ENST00000587605 NLGN1Q8N2Q7 840 aa21.85■■□□□ 1.09
MBD1-216ENST00000587605 GMCL1P1Q8NEA9 526 aa21.85■■□□□ 1.09
MBD1-216ENST00000587605 SPATA4Q8NEY3 305 aa21.85■■□□□ 1.09
MBD1-216ENST00000587605 SMCR8Q8TEV9 937 aaPredicted RBP21.85■■□□□ 1.09
MBD1-216ENST00000587605 TRIM34Q9BYJ4 488 aa21.85■■□□□ 1.09
MBD1-216ENST00000587605 AIPL1Q9NZN9 384 aa21.85■■□□□ 1.09
MBD1-216ENST00000587605 USP17L15C9J2P7 530 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 USP17L13C9JLJ4 530 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 USP17L11C9JVI0 530 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 USP17L18D6R9N7 530 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 USP17L22D6RA61 530 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 USP17L17D6RBQ6 530 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 USP17L19D6RCP7 530 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 USP17L20D6RJB6 530 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 N4BP1O75113 896 aaKnown RBP21.84■■□□□ 1.09
MBD1-216ENST00000587605 TNFRSF8P28908 595 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 EPS15P42566 896 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 ARHGAP4P98171 946 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 USP17L24Q0WX57 530 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 DOK7Q18PE1 504 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 C10orf76Q5T2E6 689 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms