RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 POLR3CQ9BUI4 534 aaPredicted RBP22.18■■□□□ 1.14
TRIM47-204ENST00000587339 TEKT3Q9BXF9 490 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 JADE2Q9NQC1 790 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 BMP2KQ9NSY1 1161 aaPredicted RBP22.18■■□□□ 1.14
TRIM47-204ENST00000587339 RWDD2AQ9UIY3 292 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 AGTPBP1Q9UPW5 1226 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 MYCLP12524 364 aaPredicted RBP22.18■■□□□ 1.14
TRIM47-204ENST00000587339 ZNF18P17022 549 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 CDK11BP21127 795 aaKnown RBP22.18■■□□□ 1.14
TRIM47-204ENST00000587339 CYP4A11Q02928 519 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 MTMR1Q13613 665 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 HSP90AA4PQ58FG1 418 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 FASTKD5Q7L8L6 764 aaKnown RBP22.18■■□□□ 1.14
TRIM47-204ENST00000587339 ADSSL1Q8N142 457 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 MAF1Q9H063 256 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 A1CFQ9NQ94 594 aaKnown RBP22.18■■□□□ 1.14
TRIM47-204ENST00000587339 SAMSN1Q9NSI8 373 aaKnown RBP22.18■■□□□ 1.14
TRIM47-204ENST00000587339 CYP39A1Q9NYL5 469 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 DNM3Q9UQ16 869 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 CHST13Q8NET6 341 aa22.17■■□□□ 1.14
TRIM47-204ENST00000587339 NELFBQ8WX92 580 aa22.17■■□□□ 1.14
TRIM47-204ENST00000587339 SLC10A4Q96EP9 437 aa22.17■■□□□ 1.14
TRIM47-204ENST00000587339 ASCC2Q9H1I8 757 aaPredicted RBP22.17■■□□□ 1.14
TRIM47-204ENST00000587339 RRAGCQ9HB90 399 aa22.17■■□□□ 1.14
TRIM47-204ENST00000587339 IDEP14735 1019 aa22.16■■□□□ 1.14
TRIM47-204ENST00000587339 UBASH3AP57075 661 aa22.16■■□□□ 1.14
TRIM47-204ENST00000587339 XRRA1Q6P2D8 792 aa22.16■■□□□ 1.14
TRIM47-204ENST00000587339 KCTD17Q8N5Z5 321 aa22.16■■□□□ 1.14
TRIM47-204ENST00000587339 NSUN6Q8TEA1 469 aaKnown RBP22.16■■□□□ 1.14
TRIM47-204ENST00000587339 HSD17B14Q9BPX1 270 aa22.16■■□□□ 1.14
TRIM47-204ENST00000587339 RGL1Q9NZL6 768 aa22.16■■□□□ 1.14
TRIM47-204ENST00000587339 BTBD7Q9P203 1132 aa22.16■■□□□ 1.14
TRIM47-204ENST00000587339 UNCXA6NJT0 531 aa22.16■■□□□ 1.14
TRIM47-204ENST00000587339 PSMA7O14818 248 aa22.16■■□□□ 1.14
TRIM47-204ENST00000587339 TPM3P06753 285 aa22.16■■□□□ 1.14
TRIM47-204ENST00000587339 TPD52L1Q16890 204 aaPredicted RBP22.16■■□□□ 1.14
TRIM47-204ENST00000587339 UNC45AQ9H3U1 944 aa22.16■■□□□ 1.14
TRIM47-204ENST00000587339 TUFT1Q9NNX1 390 aa22.16■■□□□ 1.14
TRIM47-204ENST00000587339 CBFA2T2O43439 604 aa22.15■■□□□ 1.14
TRIM47-204ENST00000587339 CCND2P30279 289 aa22.15■■□□□ 1.14
TRIM47-204ENST00000587339 PSMC6P62333 389 aa22.15■■□□□ 1.14
TRIM47-204ENST00000587339 HERVK_113P62684 666 aa22.15■■□□□ 1.14
TRIM47-204ENST00000587339 STK4Q13043 487 aa22.15■■□□□ 1.14
TRIM47-204ENST00000587339 AGO4Q9HCK5 861 aaKnown RBP22.15■■□□□ 1.14
TRIM47-204ENST00000587339 PKD2L1Q9P0L9 805 aa22.15■■□□□ 1.14
TRIM47-204ENST00000587339 ZKSCAN5Q9Y2L8 839 aa22.15■■□□□ 1.14
TRIM47-204ENST00000587339 TESPA1A2RU30 521 aaPredicted RBP22.14■■□□□ 1.14
TRIM47-204ENST00000587339 NR3C2P08235 984 aa22.14■■□□□ 1.14
TRIM47-204ENST00000587339 FCER1AP12319 257 aa22.14■■□□□ 1.14
TRIM47-204ENST00000587339 PPP1R2P41236 205 aa22.14■■□□□ 1.14
TRIM47-204ENST00000587339 SLC12A3P55017 1021 aa22.14■■□□□ 1.14
TRIM47-204ENST00000587339 PABPC4Q13310 644 aaKnown RBP eCLIP22.14■■□□□ 1.14
TRIM47-204ENST00000587339 SNAPC2Q13487 334 aa22.14■■□□□ 1.14
TRIM47-204ENST00000587339 B3GNT9Q6UX72 402 aa22.14■■□□□ 1.14
TRIM47-204ENST00000587339 VSIG10LQ86VR7 867 aa22.14■■□□□ 1.14
TRIM47-204ENST00000587339 GPBP1Q86WP2 473 aa22.14■■□□□ 1.14
TRIM47-204ENST00000587339 RIOX2Q8IUF8 465 aa22.14■■□□□ 1.14
TRIM47-204ENST00000587339 DNAJC19Q96DA6 116 aa22.14■■□□□ 1.14
TRIM47-204ENST00000587339 FBXO40Q9UH90 709 aa22.14■■□□□ 1.14
TRIM47-204ENST00000587339 NRBP1Q9UHY1 535 aa22.14■■□□□ 1.14
TRIM47-204ENST00000587339 A0A0G2JMZ2 1700 aa22.14■■□□□ 1.13
TRIM47-204ENST00000587339 DDX39AO00148 427 aaKnown RBP22.14■■□□□ 1.13
TRIM47-204ENST00000587339 PEX10O60683 326 aa22.14■■□□□ 1.13
TRIM47-204ENST00000587339 SLITRK3O94933 977 aa22.14■■□□□ 1.13
TRIM47-204ENST00000587339 MSNP26038 577 aaKnown RBP22.14■■□□□ 1.13
TRIM47-204ENST00000587339 MOGSQ13724 837 aa22.14■■□□□ 1.13
TRIM47-204ENST00000587339 CCDC186Q7Z3E2 898 aa22.14■■□□□ 1.13
TRIM47-204ENST00000587339 ANKRD35Q8N283 1001 aa22.14■■□□□ 1.13
TRIM47-204ENST00000587339 SPATC1LQ9H0A9 340 aa22.14■■□□□ 1.13
TRIM47-204ENST00000587339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.14■■□□□ 1.13
TRIM47-204ENST00000587339 COBLO75128 1261 aa22.13■■□□□ 1.13
TRIM47-204ENST00000587339 CYP11B2P19099 503 aa22.13■■□□□ 1.13
TRIM47-204ENST00000587339 GJA5P36382 358 aa22.13■■□□□ 1.13
TRIM47-204ENST00000587339 CTTNQ14247 550 aaKnown RBP22.13■■□□□ 1.13
TRIM47-204ENST00000587339 EPHA7Q15375 998 aa22.13■■□□□ 1.13
TRIM47-204ENST00000587339 TPH2Q8IWU9 490 aa22.13■■□□□ 1.13
TRIM47-204ENST00000587339 SYT2Q8N9I0 419 aaPredicted RBP22.13■■□□□ 1.13
TRIM47-204ENST00000587339 HPS3Q969F9 1004 aa22.13■■□□□ 1.13
TRIM47-204ENST00000587339 DHTKD1Q96HY7 919 aaPredicted RBP22.13■■□□□ 1.13
TRIM47-204ENST00000587339 DYDC2Q96IM9 177 aa22.13■■□□□ 1.13
TRIM47-204ENST00000587339 PAGR1Q9BTK6 254 aa22.13■■□□□ 1.13
TRIM47-204ENST00000587339 SLC39A2Q9NP94 309 aa22.13■■□□□ 1.13
TRIM47-204ENST00000587339 TBC1D22BQ9NU19 505 aa22.13■■□□□ 1.13
TRIM47-204ENST00000587339 DHX15O43143 795 aaKnown RBP22.12■■□□□ 1.13
TRIM47-204ENST00000587339 MUTP22033 750 aa22.12■■□□□ 1.13
TRIM47-204ENST00000587339 OSBPP22059 807 aa22.12■■□□□ 1.13
TRIM47-204ENST00000587339 PSMD2Q13200 908 aa22.12■■□□□ 1.13
TRIM47-204ENST00000587339 ITGB3BPQ13352 177 aaPredicted RBP22.12■■□□□ 1.13
TRIM47-204ENST00000587339 COBLL1Q53SF7 1204 aa22.12■■□□□ 1.13
TRIM47-204ENST00000587339 CDKAL1Q5VV42 579 aa22.12■■□□□ 1.13
TRIM47-204ENST00000587339 KIAA0895Q8NCT3 520 aa22.12■■□□□ 1.13
TRIM47-204ENST00000587339 ZNF830Q96NB3 372 aaPredicted RBP22.12■■□□□ 1.13
TRIM47-204ENST00000587339 KRT18P05783 430 aaKnown RBP22.12■■□□□ 1.13
TRIM47-204ENST00000587339 PTGS1P23219 599 aa22.12■■□□□ 1.13
TRIM47-204ENST00000587339 FKBP1BP68106 108 aa22.12■■□□□ 1.13
TRIM47-204ENST00000587339 NAP1L5Q96NT1 182 aaPredicted RBP22.12■■□□□ 1.13
TRIM47-204ENST00000587339 BHMT2Q9H2M3 363 aa22.12■■□□□ 1.13
TRIM47-204ENST00000587339 PANK4Q9NVE7 773 aa22.12■■□□□ 1.13
TRIM47-204ENST00000587339 PFASO15067 1338 aa22.11■■□□□ 1.13
TRIM47-204ENST00000587339 EHHADHQ08426 723 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms