RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-208ENST00000587263 USP34Q70CQ2 3546 aa17.17■□□□□ 0.34
RANBP3-208ENST00000587263 MMP1P03956 469 aa17.17■□□□□ 0.34
RANBP3-208ENST00000587263 HOXC8P31273 242 aa17.17■□□□□ 0.34
RANBP3-208ENST00000587263 NDUFV1P49821 464 aa17.17■□□□□ 0.34
RANBP3-208ENST00000587263 ZXDAP98168 799 aa17.17■□□□□ 0.34
RANBP3-208ENST00000587263 VPS53Q5VIR6 699 aa17.17■□□□□ 0.34
RANBP3-208ENST00000587263 PI4K2BQ8TCG2 481 aa17.17■□□□□ 0.34
RANBP3-208ENST00000587263 IGFLR1Q9H665 355 aa17.17■□□□□ 0.34
RANBP3-208ENST00000587263 PXMP2Q9NR77 195 aa17.17■□□□□ 0.34
RANBP3-208ENST00000587263 MRPL11Q9Y3B7 192 aaKnown RBP17.17■□□□□ 0.34
RANBP3-208ENST00000587263 ZFHX2Q9C0A1 2572 aaPredicted RBP17.16■□□□□ 0.34
RANBP3-208ENST00000587263 ATG2AQ2TAZ0 1938 aa17.16■□□□□ 0.34
RANBP3-208ENST00000587263 TREHO43280 583 aa17.16■□□□□ 0.34
RANBP3-208ENST00000587263 EYA4O95677 639 aa17.16■□□□□ 0.34
RANBP3-208ENST00000587263 GGPS1O95749 300 aa17.16■□□□□ 0.34
RANBP3-208ENST00000587263 GOLGA8HP0CJ92 632 aa17.16■□□□□ 0.34
RANBP3-208ENST00000587263 HSPD1P10809 573 aaKnown RBP17.16■□□□□ 0.34
RANBP3-208ENST00000587263 ADAM15Q13444 863 aa17.16■□□□□ 0.34
RANBP3-208ENST00000587263 CELF3Q5SZQ8 465 aaKnown RBP17.16■□□□□ 0.34
RANBP3-208ENST00000587263 C16orf70Q9BSU1 422 aa17.16■□□□□ 0.34
RANBP3-208ENST00000587263 UBA5Q9GZZ9 404 aa17.16■□□□□ 0.34
RANBP3-208ENST00000587263 DCTPP1Q9H773 170 aa17.16■□□□□ 0.34
RANBP3-208ENST00000587263 C5orf42Q9H799 3197 aa17.16■□□□□ 0.34
RANBP3-208ENST00000587263 CCDC171Q6TFL3 1326 aa17.16■□□□□ 0.34
RANBP3-208ENST00000587263 CACNA1HO95180 2353 aa17.15■□□□□ 0.34
RANBP3-208ENST00000587263 LOC730098B7Z3J9 87 aa17.15■□□□□ 0.34
RANBP3-208ENST00000587263 H3BRB1 525 aa17.15■□□□□ 0.34
RANBP3-208ENST00000587263 LINC01565O15544 149 aa17.15■□□□□ 0.34
RANBP3-208ENST00000587263 LINC00271P0C7V0 271 aa17.15■□□□□ 0.34
RANBP3-208ENST00000587263 SMIM10L2AP0DMW4 78 aa17.15■□□□□ 0.34
RANBP3-208ENST00000587263 SMIM10L2BP0DMW5 78 aa17.15■□□□□ 0.34
RANBP3-208ENST00000587263 GNAT1P11488 350 aa17.15■□□□□ 0.34
RANBP3-208ENST00000587263 GTF2F1P35269 517 aaKnown RBP eCLIP17.15■□□□□ 0.341e-15■■■■■ 63.3
RANBP3-208ENST00000587263 SIGLEC14Q08ET2 396 aa17.15■□□□□ 0.34
RANBP3-208ENST00000587263 CLP1Q92989 425 aaKnown RBP17.15■□□□□ 0.34
RANBP3-208ENST00000587263 MSLNLQ96KJ4 702 aa17.15■□□□□ 0.34
RANBP3-208ENST00000587263 PLVAPQ9BX97 442 aa17.15■□□□□ 0.34
RANBP3-208ENST00000587263 CPVLQ9H3G5 476 aa17.15■□□□□ 0.34
RANBP3-208ENST00000587263 TUT1Q9H6E5 874 aaKnown RBP17.15■□□□□ 0.34
RANBP3-208ENST00000587263 FAM86C1Q9NVL1 165 aa17.15■□□□□ 0.34
RANBP3-208ENST00000587263 KMT2EQ8IZD2 1858 aa17.14■□□□□ 0.33
RANBP3-208ENST00000587263 CFAP54Q96N23 3096 aa17.14■□□□□ 0.33
RANBP3-208ENST00000587263 SORBS3O60504 671 aa17.14■□□□□ 0.33
RANBP3-208ENST00000587263 CFBP00751 764 aa17.14■□□□□ 0.33
RANBP3-208ENST00000587263 TGFB3P10600 412 aa17.14■□□□□ 0.33
RANBP3-208ENST00000587263 PCP11498 1178 aaKnown RBP17.14■□□□□ 0.33
RANBP3-208ENST00000587263 CBX2Q14781 532 aaPredicted RBP17.14■□□□□ 0.33
RANBP3-208ENST00000587263 SMRP1Q8NCR6 262 aa17.14■□□□□ 0.33
RANBP3-208ENST00000587263 OSBPL7Q9BZF2 842 aa17.14■□□□□ 0.33
RANBP3-208ENST00000587263 RNPEPQ9H4A4 650 aa17.14■□□□□ 0.33
RANBP3-208ENST00000587263 RGS20O76081 388 aa17.13■□□□□ 0.33
RANBP3-208ENST00000587263 CSPG5O95196 566 aa17.13■□□□□ 0.33
RANBP3-208ENST00000587263 FGAP02671 866 aa17.13■□□□□ 0.33
RANBP3-208ENST00000587263 MYCLP12524 364 aaPredicted RBP17.13■□□□□ 0.33
RANBP3-208ENST00000587263 UBA1P22314 1058 aaKnown RBP17.13■□□□□ 0.33
RANBP3-208ENST00000587263 BTG3Q14201 252 aaPredicted RBP17.13■□□□□ 0.33
RANBP3-208ENST00000587263 QRICH1Q2TAL8 776 aa17.13■□□□□ 0.33
RANBP3-208ENST00000587263 ADGRF4Q8IZF3 695 aa17.13■□□□□ 0.33
RANBP3-208ENST00000587263 ATOH1Q92858 354 aaPredicted RBP17.13■□□□□ 0.33
RANBP3-208ENST00000587263 P2RX5Q93086 422 aa17.13■□□□□ 0.33
RANBP3-208ENST00000587263 PDCD2LQ9BRP1 358 aa17.13■□□□□ 0.33
RANBP3-208ENST00000587263 MLXIPQ9HAP2 919 aa17.13■□□□□ 0.33
RANBP3-208ENST00000587263 RC3H2Q9HBD1 1191 aaKnown RBP17.13■□□□□ 0.33
RANBP3-208ENST00000587263 ZMYM6O95789 1325 aa17.13■□□□□ 0.33
RANBP3-208ENST00000587263 MYH7BA7E2Y1 1941 aa17.13■□□□□ 0.33
RANBP3-208ENST00000587263 DHX16O60231 1041 aaKnown RBP17.12■□□□□ 0.33
RANBP3-208ENST00000587263 LGALS2P05162 132 aa17.12■□□□□ 0.33
RANBP3-208ENST00000587263 HSD17B4P51659 736 aa17.12■□□□□ 0.33
RANBP3-208ENST00000587263 COASYQ13057 564 aa17.12■□□□□ 0.33
RANBP3-208ENST00000587263 ASPRV1Q53RT3 343 aa17.12■□□□□ 0.33
RANBP3-208ENST00000587263 FAM26DQ5JW98 314 aa17.12■□□□□ 0.33
RANBP3-208ENST00000587263 MFSD6Q6ZSS7 791 aa17.12■□□□□ 0.33
RANBP3-208ENST00000587263 EFHBQ8N7U6 833 aa17.12■□□□□ 0.33
RANBP3-208ENST00000587263 ALG13Q9NP73 1137 aaKnown RBP17.12■□□□□ 0.33
RANBP3-208ENST00000587263 HELLSQ9NRZ9 838 aa17.12■□□□□ 0.33
RANBP3-208ENST00000587263 NOP56O00567 594 aaKnown RBP17.11■□□□□ 0.33
RANBP3-208ENST00000587263 GHRHRQ02643 423 aa17.11■□□□□ 0.33
RANBP3-208ENST00000587263 NAALADL2Q58DX5 795 aa17.11■□□□□ 0.33
RANBP3-208ENST00000587263 VSIG10LQ86VR7 867 aa17.11■□□□□ 0.33
RANBP3-208ENST00000587263 DGKHQ86XP1 1220 aa17.11■□□□□ 0.33
RANBP3-208ENST00000587263 PNMA1Q8ND90 353 aa17.11■□□□□ 0.33
RANBP3-208ENST00000587263 ESR2Q92731 530 aa17.11■□□□□ 0.33
RANBP3-208ENST00000587263 PHF7Q9BWX1 381 aaPredicted RBP17.11■□□□□ 0.33
RANBP3-208ENST00000587263 USP26Q9BXU7 913 aa17.11■□□□□ 0.33
RANBP3-208ENST00000587263 RNF41Q9H4P4 317 aaPredicted RBP17.11■□□□□ 0.33
RANBP3-208ENST00000587263 SETD4Q9NVD3 440 aa17.11■□□□□ 0.33
RANBP3-208ENST00000587263 MAP3K20Q9NYL2 800 aaKnown RBP17.11■□□□□ 0.33
RANBP3-208ENST00000587263 CLEC1BQ9P126 229 aa17.11■□□□□ 0.33
RANBP3-208ENST00000587263 PLAGL2Q9UPG8 496 aa17.11■□□□□ 0.33
RANBP3-208ENST00000587263 USP15Q9Y4E8 981 aaPredicted RBP17.11■□□□□ 0.33
RANBP3-208ENST00000587263 AVPR2P30518 371 aa17.1■□□□□ 0.33
RANBP3-208ENST00000587263 NUBP1P53384 320 aa17.1■□□□□ 0.33
RANBP3-208ENST00000587263 VCPP55072 806 aaKnown RBP17.1■□□□□ 0.33
RANBP3-208ENST00000587263 HAND2P61296 217 aa17.1■□□□□ 0.33
RANBP3-208ENST00000587263 SP2Q02086 613 aa17.1■□□□□ 0.33
RANBP3-208ENST00000587263 CAMK1Q14012 370 aa17.1■□□□□ 0.33
RANBP3-208ENST00000587263 PGM5Q15124 567 aa17.1■□□□□ 0.33
RANBP3-208ENST00000587263 CCDC178Q5BJE1 867 aa17.1■□□□□ 0.33
RANBP3-208ENST00000587263 STOX1Q6ZVD7 989 aa17.1■□□□□ 0.33
RANBP3-208ENST00000587263 ZNF689Q96CS4 500 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms