RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 RBM47A0AV96 593 aaKnown RBP16.59■□□□□ 0.25
CALR-204ENST00000586967 RGS20O76081 388 aa16.59■□□□□ 0.25
CALR-204ENST00000586967 SNAI1O95863 264 aaPredicted RBP16.59■□□□□ 0.25
CALR-204ENST00000586967 TXNP10599 105 aaKnown RBP16.59■□□□□ 0.25
CALR-204ENST00000586967 SKOR2Q2VWA4 1001 aaPredicted RBP16.59■□□□□ 0.25
CALR-204ENST00000586967 AXDND1Q5T1B0 1012 aaPredicted RBP16.59■□□□□ 0.25
CALR-204ENST00000586967 KRT79Q5XKE5 535 aa16.59■□□□□ 0.25
CALR-204ENST00000586967 ZNF746Q6NUN9 644 aaPredicted RBP16.59■□□□□ 0.25
CALR-204ENST00000586967 SMAP1Q8IYB5 467 aaPredicted RBP16.59■□□□□ 0.25
CALR-204ENST00000586967 KCTD17Q8N5Z5 321 aa16.59■□□□□ 0.25
CALR-204ENST00000586967 CALML4Q96GE6 196 aa16.59■□□□□ 0.25
CALR-204ENST00000586967 ZFP91Q96JP5 570 aaPredicted RBP16.59■□□□□ 0.25
CALR-204ENST00000586967 CSRNP2Q9H175 543 aa16.59■□□□□ 0.25
CALR-204ENST00000586967 JPH1Q9HDC5 661 aaPredicted RBP16.59■□□□□ 0.25
CALR-204ENST00000586967 LMBRD1Q9NUN5 540 aa16.59■□□□□ 0.25
CALR-204ENST00000586967 ZHX1Q9UKY1 873 aaPredicted RBP16.59■□□□□ 0.25
CALR-204ENST00000586967 KDM3AQ9Y4C1 1321 aa16.59■□□□□ 0.25
CALR-204ENST00000586967 DKC1O60832 514 aaKnown RBP eCLIP16.58■□□□□ 0.24
CALR-204ENST00000586967 HMGCRP04035 888 aa16.58■□□□□ 0.24
CALR-204ENST00000586967 KCNA2P16389 499 aa16.58■□□□□ 0.24
CALR-204ENST00000586967 CTCFP49711 727 aaPredicted RBP16.58■□□□□ 0.24
CALR-204ENST00000586967 RESP18Q5W5W9 173 aa16.58■□□□□ 0.24
CALR-204ENST00000586967 OTOP1Q7RTM1 612 aa16.58■□□□□ 0.24
CALR-204ENST00000586967 RASSF8Q8NHQ8 419 aa16.58■□□□□ 0.24
CALR-204ENST00000586967 CDK5RAP3Q96JB5 506 aa16.58■□□□□ 0.24
CALR-204ENST00000586967 NT5C3AQ9H0P0 336 aa16.58■□□□□ 0.24
CALR-204ENST00000586967 MLXIPQ9HAP2 919 aa16.58■□□□□ 0.24
CALR-204ENST00000586967 SLC9A2Q9UBY0 812 aa16.58■□□□□ 0.24
CALR-204ENST00000586967 FAM184BQ9ULE4 1060 aa16.58■□□□□ 0.24
CALR-204ENST00000586967 TRIM17Q9Y577 477 aa16.58■□□□□ 0.24
CALR-204ENST00000586967 MCM3APO60318 1980 aa16.58■□□□□ 0.24
CALR-204ENST00000586967 ZSWIM8A7E2V4 1837 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 WDR64B1ANS9 1081 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 ADCY3O60266 1144 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 GH1P01241 217 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 MUTP22033 750 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 UBA1P22314 1058 aaKnown RBP16.57■□□□□ 0.24
CALR-204ENST00000586967 SEMA3FQ13275 785 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 LAMC2Q13753 1193 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 NCAPH2Q6IBW4 605 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 TAPT1Q6NXT6 567 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 METTL7BQ6UX53 244 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 DHX37Q8IY37 1157 aaKnown RBP16.57■□□□□ 0.24
CALR-204ENST00000586967 FSIP1Q8NA03 581 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 CLIC6Q96NY7 704 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 CCSER1Q9C0I3 900 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 PKD2L1Q9P0L9 805 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 DDX41Q9UJV9 622 aaKnown RBP16.57■□□□□ 0.24
CALR-204ENST00000586967 VAV3Q9UKW4 847 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 SAMM50Q9Y512 469 aa16.57■□□□□ 0.24
CALR-204ENST00000586967 NOP56O00567 594 aaKnown RBP16.56■□□□□ 0.24
CALR-204ENST00000586967 DHX15O43143 795 aaKnown RBP16.56■□□□□ 0.24
CALR-204ENST00000586967 IGHA2P01877 340 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 AKR1A1P14550 325 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 CYP2C19P33261 490 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 ITGB3BPQ13352 177 aaPredicted RBP16.56■□□□□ 0.24
CALR-204ENST00000586967 EPHA7Q15375 998 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 NFKBIBQ15653 356 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 CCL14Q16627 93 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 DUSP28Q4G0W2 176 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 BRDTQ58F21 947 aaPredicted RBP16.56■□□□□ 0.24
CALR-204ENST00000586967 CELF3Q5SZQ8 465 aaKnown RBP16.56■□□□□ 0.24
CALR-204ENST00000586967 CCDC62Q6P9F0 684 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 MIER3Q7Z3K6 550 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 CABP7Q86V35 215 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 TRIB2Q92519 343 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 SYMPKQ92797 1274 aaKnown RBP16.56■□□□□ 0.24
CALR-204ENST00000586967 KATNBL1Q9H079 304 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 FLRT1Q9NZU1 646 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 USP25Q9UHP3 1055 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 TSKSQ9UJT2 592 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 Q9Y3F1 56 aa16.56■□□□□ 0.24
CALR-204ENST00000586967 POTEMA6NI47 508 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 ATP9AO75110 1047 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 GGPS1O95749 300 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 PSAPP07602 524 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 TNFAIP2Q03169 654 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 FAM160A1Q05DH4 1040 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 SPIRE1Q08AE8 756 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 PKN2Q16513 984 aaKnown RBP16.55■□□□□ 0.24
CALR-204ENST00000586967 IL17AQ16552 155 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 CCDC144BQ3MJ40 725 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 MIS18BP1Q6P0N0 1132 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 SHC4Q6S5L8 630 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 CYFIP1Q7L576 1253 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 SNX29Q8TEQ0 813 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 SYAP1Q96A49 352 aaPredicted RBP16.55■□□□□ 0.24
CALR-204ENST00000586967 EMID1Q96A84 441 aaPredicted RBP16.55■□□□□ 0.24
CALR-204ENST00000586967 POLR3CQ9BUI4 534 aaPredicted RBP16.55■□□□□ 0.24
CALR-204ENST00000586967 UNC45AQ9H3U1 944 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 TUFT1Q9NNX1 390 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 DISC1Q9NRI5 854 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 HOOK1Q9UJC3 728 aaKnown RBP16.55■□□□□ 0.24
CALR-204ENST00000586967 KCNH3Q9ULD8 1083 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 PCDHA10Q9Y5I2 948 aa16.55■□□□□ 0.24
CALR-204ENST00000586967 DDX49Q9Y6V7 483 aaKnown RBP16.55■□□□□ 0.24
CALR-204ENST00000586967 FAM237AA0A1B0GTK4 181 aa16.54■□□□□ 0.24
CALR-204ENST00000586967 DDX39AO00148 427 aaKnown RBP16.54■□□□□ 0.24
CALR-204ENST00000586967 CHMP2AO43633 222 aa16.54■□□□□ 0.24
CALR-204ENST00000586967 FARP2O94887 1054 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms