RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	NOL7	Q9UMY1	257 aa	Known RBP	13.98	□□□□□ -0.17
PKN1-208	ENST00000586900	VPS37C	A5D8V6	355 aa	Predicted RBP	13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	MYADML2	A6NDP7	307 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	MSH4	O15457	936 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	DHX15	O43143	795 aa	Known RBP	13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	PPFIA4	O75335	1185 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	CABYR	O75952	493 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	HOXD8	P13378	290 aa	Predicted RBP	13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	PTGS1	P23219	599 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	SOX10	P56693	466 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	ITGB3BP	Q13352	177 aa	Predicted RBP	13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	KCNA10	Q16322	511 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	RILPL1	Q5EBL4	403 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	UBE2Q1	Q7Z7E8	422 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	SLC5A5	Q92911	643 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	FAM20A	Q96MK3	541 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	SPATA33	Q96N06	139 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	RIT2	Q99578	217 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	ZNF577	Q9BSK1	485 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	KCNMB3	Q9NPA1	279 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	POLR3E	Q9NVU0	708 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	PHF24	Q9UPV7	400 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	MTMR6	Q9Y217	621 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	DOCK5	Q9H7D0	1870 aa		13.97	□□□□□ -0.17
PKN1-208	ENST00000586900	SLC37A4	O43826	429 aa		13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	ASGR1	P07306	291 aa		13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	MMP3	P08254	477 aa		13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	COL6A1	P12109	1028 aa		13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	ANP32A	P39687	249 aa	Known RBP	13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	ACLY	P53396	1101 aa		13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	IRX5	P78411	483 aa	Predicted RBP	13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	BEX3	Q00994	111 aa		13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	DGKD	Q16760	1214 aa		13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	HSDL1	Q3SXM5	330 aa		13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	NECAB2	Q7Z6G3	386 aa		13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	SPRYD3	Q8NCJ5	442 aa		13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	ETNPPL	Q8TBG4	499 aa		13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	AFG1L	Q8WV93	481 aa		13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	BCAS3	Q9H6U6	928 aa		13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	JPH1	Q9HDC5	661 aa	Predicted RBP	13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	SLC9A2	Q9UBY0	812 aa		13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	BRCA2	P51587	3418 aa		13.96	□□□□□ -0.17
PKN1-208	ENST00000586900	NOP56	O00567	594 aa	Known RBP	13.95	□□□□□ -0.18
PKN1-208	ENST00000586900	PSMD10	O75832	226 aa		13.95	□□□□□ -0.18
PKN1-208	ENST00000586900	BAG4	O95429	457 aa	Known RBP	13.95	□□□□□ -0.18
PKN1-208	ENST00000586900	TOB1	P50616	345 aa	Predicted RBP	13.95	□□□□□ -0.18
PKN1-208	ENST00000586900	TTC38	Q5R3I4	469 aa		13.95	□□□□□ -0.18
PKN1-208	ENST00000586900	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.95	□□□□□ -0.18
PKN1-208	ENST00000586900	SLFN12	Q8IYM2	578 aa		13.95	□□□□□ -0.18
PKN1-208	ENST00000586900	SEPT1	Q8WYJ6	367 aa		13.95	□□□□□ -0.18
PKN1-208	ENST00000586900	PAWR	Q96IZ0	340 aa	Known RBP	13.95	□□□□□ -0.18
PKN1-208	ENST00000586900	GPR20	Q99678	358 aa		13.95	□□□□□ -0.18
PKN1-208	ENST00000586900	PKD2L1	Q9P0L9	805 aa		13.95	□□□□□ -0.18
PKN1-208	ENST00000586900	ELP1	O95163	1332 aa		13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	WNT7A	O00755	349 aa		13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	NEMF	O60524	1076 aa		13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	ATG7	O95352	703 aa		13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	MYCN	P04198	464 aa	Predicted RBP	13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	PURA	Q00577	322 aa	Known RBP	13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	KRT76	Q01546	638 aa		13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	REST	Q13127	1097 aa		13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	LRCH2	Q5VUJ6	765 aa		13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	POTED	Q86YR6	584 aa		13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	HAS1	Q92839	578 aa		13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	GLT1D1	Q96MS3	346 aa		13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	MTG1	Q9BT17	334 aa	Predicted RBP	13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	TEKT3	Q9BXF9	490 aa		13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	SEZ6L	Q9BYH1	1024 aa		13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	C11orf49	Q9H6J7	331 aa		13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	TCEAL9	Q9UHQ7	104 aa		13.94	□□□□□ -0.18
PKN1-208	ENST00000586900	SCN10A	Q9Y5Y9	1956 aa		13.93	□□□□□ -0.18
PKN1-208	ENST00000586900		A0A1W2PQ45	241 aa	Predicted RBP	13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	GSTTP1	A0A1W2PQM5	241 aa		13.93	□□□□□ -0.18
PKN1-208	ENST00000586900		A0A1W2PQY0	241 aa		13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	GAS7	O60861	476 aa		13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	MYL3	P08590	195 aa		13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	ZSCAN22	P10073	491 aa	Predicted RBP	13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	ATP2B1	P20020	1258 aa		13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	MCM7	P33993	719 aa		13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	RGS19	P49795	217 aa		13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	ZNF174	Q15697	407 aa		13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	CALCRL	Q16602	461 aa		13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	C1orf53	Q5VUE5	145 aa		13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	B3GNT9	Q6UX72	402 aa		13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	FERMT3	Q86UX7	667 aa		13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	RDM1	Q8NG50	284 aa		13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	DIS3L	Q8TF46	1054 aa	Known RBP	13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	MTMR9	Q96QG7	549 aa		13.93	□□□□□ -0.18
PKN1-208	ENST00000586900	IGKV6D-21	A0A0A0MT36	114 aa		13.92	□□□□□ -0.18
PKN1-208	ENST00000586900	LAD1	O00515	517 aa		13.92	□□□□□ -0.18
PKN1-208	ENST00000586900	MARCH6	O60337	910 aa		13.92	□□□□□ -0.18
PKN1-208	ENST00000586900	SORBS3	O60504	671 aa		13.92	□□□□□ -0.18
PKN1-208	ENST00000586900	LGR5	O75473	907 aa		13.92	□□□□□ -0.18
PKN1-208	ENST00000586900	CCNE2	O96020	404 aa		13.92	□□□□□ -0.18
PKN1-208	ENST00000586900	SFN	P31947	248 aa		13.92	□□□□□ -0.18
PKN1-208	ENST00000586900	TCF7	P36402	384 aa	Predicted RBP	13.92	□□□□□ -0.18
PKN1-208	ENST00000586900	JAK3	P52333	1124 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms