RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 LCTP09848 1927 aa22.93■■□□□ 1.26
ATG4D-204ENST00000586417 MSH4O15457 936 aa22.93■■□□□ 1.26
ATG4D-204ENST00000586417 RPN1P04843 607 aaKnown RBP22.93■■□□□ 1.26
ATG4D-204ENST00000586417 SYTL5Q8TDW5 730 aaPredicted RBP22.93■■□□□ 1.26
ATG4D-204ENST00000586417 FAM20AQ96MK3 541 aa22.93■■□□□ 1.26
ATG4D-204ENST00000586417 EHMT1Q9H9B1 1298 aa22.93■■□□□ 1.26
ATG4D-204ENST00000586417 CYP39A1Q9NYL5 469 aa22.93■■□□□ 1.26
ATG4D-204ENST00000586417 STK17AQ9UEE5 414 aa22.93■■□□□ 1.26
ATG4D-204ENST00000586417 RPTORQ8N122 1335 aa22.93■■□□□ 1.26
ATG4D-204ENST00000586417 DOCK3Q8IZD9 2030 aa22.93■■□□□ 1.26
ATG4D-204ENST00000586417 CCNA1P78396 465 aa22.92■■□□□ 1.26
ATG4D-204ENST00000586417 HYIQ5T013 277 aa22.92■■□□□ 1.26
ATG4D-204ENST00000586417 SHCBP1Q8NEM2 672 aa22.92■■□□□ 1.26
ATG4D-204ENST00000586417 MED15Q96RN5 788 aa22.92■■□□□ 1.26
ATG4D-204ENST00000586417 TRIM5Q9C035 493 aa22.92■■□□□ 1.26
ATG4D-204ENST00000586417 MROH8Q9H579 483 aa22.92■■□□□ 1.26
ATG4D-204ENST00000586417 KLRC4O43908 158 aa22.91■■□□□ 1.26
ATG4D-204ENST00000586417 CD44P16070 742 aaKnown RBP22.91■■□□□ 1.26
ATG4D-204ENST00000586417 ZNF76P36508 570 aa22.91■■□□□ 1.26
ATG4D-204ENST00000586417 UBXN2AP68543 259 aa22.91■■□□□ 1.26
ATG4D-204ENST00000586417 ECM1Q16610 540 aa22.91■■□□□ 1.26
ATG4D-204ENST00000586417 ANKRD35Q8N283 1001 aa22.91■■□□□ 1.26
ATG4D-204ENST00000586417 SAMD3Q8N6K7 520 aa22.91■■□□□ 1.26
ATG4D-204ENST00000586417 FBXO40Q9UH90 709 aa22.91■■□□□ 1.26
ATG4D-204ENST00000586417 PLXNB2O15031 1838 aa22.91■■□□□ 1.26
ATG4D-204ENST00000586417 CT47A1Q5JQC4 288 aaPredicted RBP22.91■■□□□ 1.26
ATG4D-204ENST00000586417 MAP3K20Q9NYL2 800 aaKnown RBP22.91■■□□□ 1.26
ATG4D-204ENST00000586417 PPP1R3GB7ZBB8 358 aa22.9■■□□□ 1.26
ATG4D-204ENST00000586417 ERCC5P28715 1186 aaPredicted RBP22.9■■□□□ 1.26
ATG4D-204ENST00000586417 COPB2P35606 906 aa22.9■■□□□ 1.26
ATG4D-204ENST00000586417 KCNK18Q7Z418 384 aa22.9■■□□□ 1.26
ATG4D-204ENST00000586417 CDK5RAP3Q96JB5 506 aa22.9■■□□□ 1.26
ATG4D-204ENST00000586417 TAAR1Q96RJ0 339 aa22.9■■□□□ 1.26
ATG4D-204ENST00000586417 C7orf25Q9BPX7 421 aa22.9■■□□□ 1.26
ATG4D-204ENST00000586417 TRIM9Q9C026 710 aa22.9■■□□□ 1.26
ATG4D-204ENST00000586417 RMND1Q9NWS8 449 aa22.9■■□□□ 1.26
ATG4D-204ENST00000586417 VAV3Q9UKW4 847 aa22.9■■□□□ 1.26
ATG4D-204ENST00000586417 ZSWIM8A7E2V4 1837 aa22.89■■□□□ 1.26
ATG4D-204ENST00000586417 FRMPD4Q14CM0 1322 aa22.89■■□□□ 1.26
ATG4D-204ENST00000586417 SLC26A4O43511 780 aa22.89■■□□□ 1.26
ATG4D-204ENST00000586417 CNTN2Q02246 1040 aa22.89■■□□□ 1.26
ATG4D-204ENST00000586417 KCNB1Q14721 858 aa22.89■■□□□ 1.26
ATG4D-204ENST00000586417 SMYD4Q8IYR2 804 aaPredicted RBP22.89■■□□□ 1.26
ATG4D-204ENST00000586417 DNAJC5GQ8N7S2 189 aa22.89■■□□□ 1.26
ATG4D-204ENST00000586417 ENOX1Q8TC92 643 aaKnown RBP22.89■■□□□ 1.26
ATG4D-204ENST00000586417 PGK2P07205 417 aa22.89■■□□□ 1.25
ATG4D-204ENST00000586417 TPM4P67936 248 aa22.89■■□□□ 1.25
ATG4D-204ENST00000586417 CEP55Q53EZ4 464 aa22.89■■□□□ 1.25
ATG4D-204ENST00000586417 GPR142Q7Z601 462 aa22.89■■□□□ 1.25
ATG4D-204ENST00000586417 LARP4BQ92615 738 aaKnown RBP22.89■■□□□ 1.25
ATG4D-204ENST00000586417 RAD54LQ92698 747 aa22.89■■□□□ 1.25
ATG4D-204ENST00000586417 MMP19Q99542 508 aa22.89■■□□□ 1.25
ATG4D-204ENST00000586417 KDM3AQ9Y4C1 1321 aa22.88■■□□□ 1.25
ATG4D-204ENST00000586417 FCER1AP12319 257 aa22.88■■□□□ 1.25
ATG4D-204ENST00000586417 CTGFP29279 349 aa22.88■■□□□ 1.25
ATG4D-204ENST00000586417 CDC25BP30305 580 aa22.88■■□□□ 1.25
ATG4D-204ENST00000586417 ZNF658Q5TYW1 1059 aaPredicted RBP22.88■■□□□ 1.25
ATG4D-204ENST00000586417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.88■■□□□ 1.251e-7■■■■■ 46
ATG4D-204ENST00000586417 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.88■■□□□ 1.25
ATG4D-204ENST00000586417 MRFAP1L1Q96HT8 127 aa22.88■■□□□ 1.25
ATG4D-204ENST00000586417 ASTN1O14525 1302 aa22.87■■□□□ 1.25
ATG4D-204ENST00000586417 MEIS1O00470 390 aa22.87■■□□□ 1.25
ATG4D-204ENST00000586417 CCT6AP40227 531 aaKnown RBP22.87■■□□□ 1.25
ATG4D-204ENST00000586417 SEMA3FQ13275 785 aa22.87■■□□□ 1.25
ATG4D-204ENST00000586417 MCM6Q14566 821 aa22.87■■□□□ 1.25
ATG4D-204ENST00000586417 KCTD2Q14681 263 aa22.87■■□□□ 1.25
ATG4D-204ENST00000586417 KMT5BQ4FZB7 885 aa22.87■■□□□ 1.25
ATG4D-204ENST00000586417 SV2BQ7L1I2 683 aa22.87■■□□□ 1.25
ATG4D-204ENST00000586417 TRMT44Q8IYL2 757 aaKnown RBP22.87■■□□□ 1.25
ATG4D-204ENST00000586417 IL31RAQ8NI17 732 aa22.87■■□□□ 1.25
ATG4D-204ENST00000586417 CFHR5Q9BXR6 569 aa22.87■■□□□ 1.25
ATG4D-204ENST00000586417 FANCLQ9NW38 375 aa22.87■■□□□ 1.25
ATG4D-204ENST00000586417 PFASO15067 1338 aa22.87■■□□□ 1.25
ATG4D-204ENST00000586417 MGAMO43451 1857 aa22.86■■□□□ 1.25
ATG4D-204ENST00000586417 RHOBTB3O94955 611 aa22.86■■□□□ 1.25
ATG4D-204ENST00000586417 ATP1A3P13637 1013 aa22.86■■□□□ 1.25
ATG4D-204ENST00000586417 MAPK4P31152 587 aa22.86■■□□□ 1.25
ATG4D-204ENST00000586417 AMPD3Q01432 767 aa22.86■■□□□ 1.25
ATG4D-204ENST00000586417 SLC5A5Q92911 643 aa22.86■■□□□ 1.25
ATG4D-204ENST00000586417 ZFP91Q96JP5 570 aaPredicted RBP22.86■■□□□ 1.25
ATG4D-204ENST00000586417 MYMKA6NI61 221 aa22.86■■□□□ 1.25
ATG4D-204ENST00000586417 MED24O75448 989 aa22.86■■□□□ 1.25
ATG4D-204ENST00000586417 PSMD10O75832 226 aa22.86■■□□□ 1.25
ATG4D-204ENST00000586417 PTMAP06454 111 aaKnown RBP22.86■■□□□ 1.25
ATG4D-204ENST00000586417 CAP1Q01518 475 aa22.86■■□□□ 1.25
ATG4D-204ENST00000586417 RMDN3Q96TC7 470 aa22.86■■□□□ 1.25
ATG4D-204ENST00000586417 ARHGAP39Q9C0H5 1083 aa22.86■■□□□ 1.25
ATG4D-204ENST00000586417 NT5C3AQ9H0P0 336 aa22.86■■□□□ 1.25
ATG4D-204ENST00000586417 GDAQ9Y2T3 454 aa22.86■■□□□ 1.25
ATG4D-204ENST00000586417 DNAJC25-GNG10A0A024R161 153 aa22.85■■□□□ 1.25
ATG4D-204ENST00000586417 POTEB3A0JP26 581 aa22.85■■□□□ 1.25
ATG4D-204ENST00000586417 EIF2AK2P19525 551 aaKnown RBP22.85■■□□□ 1.25
ATG4D-204ENST00000586417 ADORA2AP29274 412 aa22.85■■□□□ 1.25
ATG4D-204ENST00000586417 SETQ01105 290 aaPredicted RBP22.85■■□□□ 1.25
ATG4D-204ENST00000586417 NCAPH2Q6IBW4 605 aa22.85■■□□□ 1.25
ATG4D-204ENST00000586417 POTEBQ6S5H4 581 aa22.85■■□□□ 1.25
ATG4D-204ENST00000586417 PLEKHH3Q7Z736 793 aa22.85■■□□□ 1.25
ATG4D-204ENST00000586417 FAM133AQ8N9E0 248 aa22.85■■□□□ 1.25
ATG4D-204ENST00000586417 MXRA8Q9BRK3 442 aa22.85■■□□□ 1.25
ATG4D-204ENST00000586417 NFE2L3Q9Y4A8 694 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms