RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 PTPN11Q06124 597 aaPredicted RBP10.77□□□□□ -0.69
SDF2-203ENST00000585749 COL19A1Q14993 1142 aa10.77□□□□□ -0.69
SDF2-203ENST00000585749 TCTN1Q2MV58 587 aa10.77□□□□□ -0.69
SDF2-203ENST00000585749 ASPRV1Q53RT3 343 aa10.77□□□□□ -0.69
SDF2-203ENST00000585749 CNKSR3Q6P9H4 555 aa10.77□□□□□ -0.69
SDF2-203ENST00000585749 CASC1Q6TDU7 716 aa10.77□□□□□ -0.69
SDF2-203ENST00000585749 STOX1Q6ZVD7 989 aa10.77□□□□□ -0.69
SDF2-203ENST00000585749 ADHFE1Q8IWW8 467 aa10.77□□□□□ -0.69
SDF2-203ENST00000585749 MRPL38Q96DV4 380 aaKnown RBP10.77□□□□□ -0.69
SDF2-203ENST00000585749 TRERF1Q96PN7 1200 aa10.77□□□□□ -0.69
SDF2-203ENST00000585749 CTAGE1Q96RT6 745 aa10.77□□□□□ -0.69
SDF2-203ENST00000585749 WDR11Q9BZH6 1224 aa10.77□□□□□ -0.69
SDF2-203ENST00000585749 CCPG1Q9ULG6 757 aa10.77□□□□□ -0.69
SDF2-203ENST00000585749 MYH6P13533 1939 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 ERICH2A1L162 156 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 DPYSL4O14531 572 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 CXCL10P02778 98 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 PTPN5P54829 565 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 SNAP25P60880 206 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 FOXK2Q01167 660 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 SART3Q15020 963 aaKnown RBP10.76□□□□□ -0.69
SDF2-203ENST00000585749 NECTIN1Q15223 517 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 MUM1L1Q5H9M0 696 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 MB21D2Q8IYB1 491 aaPredicted RBP10.76□□□□□ -0.69
SDF2-203ENST00000585749 OR6J1Q8NGC5 347 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 CAGE1Q8TC20 777 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 AFAP1L1Q8TED9 768 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 PABPC5Q96DU9 382 aaKnown RBP10.76□□□□□ -0.69
SDF2-203ENST00000585749 PURBQ96QR8 312 aaKnown RBP10.76□□□□□ -0.69
SDF2-203ENST00000585749 C17orf80Q9BSJ5 609 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 ANO2Q9NQ90 1003 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 MUTYHQ9UIF7 546 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 FAM50BQ9Y247 325 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 SPTBN4Q9H254 2564 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 ATG2AQ2TAZ0 1938 aa10.76□□□□□ -0.69
SDF2-203ENST00000585749 KMT2EQ8IZD2 1858 aa10.75□□□□□ -0.69
SDF2-203ENST00000585749 RBM47A0AV96 593 aaKnown RBP10.75□□□□□ -0.69
SDF2-203ENST00000585749 A6NJR5 290 aa10.75□□□□□ -0.69
SDF2-203ENST00000585749 RBAK-RBAKDNI3L0D1 243 aa10.75□□□□□ -0.69
SDF2-203ENST00000585749 IFIT3O14879 490 aaKnown RBP10.75□□□□□ -0.69
SDF2-203ENST00000585749 SLC27A2O14975 620 aa10.75□□□□□ -0.69
SDF2-203ENST00000585749 NBNO60934 754 aa10.75□□□□□ -0.69
SDF2-203ENST00000585749 PARP1P09874 1014 aaKnown RBP10.75□□□□□ -0.69
SDF2-203ENST00000585749 GOLGA8HP0CJ92 632 aa10.75□□□□□ -0.69
SDF2-203ENST00000585749 TCF15Q12870 199 aa10.75□□□□□ -0.69
SDF2-203ENST00000585749 E2F4Q16254 413 aa10.75□□□□□ -0.69
SDF2-203ENST00000585749 PTGISQ16647 500 aa10.75□□□□□ -0.69
SDF2-203ENST00000585749 TIGD5Q53EQ6 642 aa10.75□□□□□ -0.69
SDF2-203ENST00000585749 HERC4Q5GLZ8 1057 aaPredicted RBP10.75□□□□□ -0.69
SDF2-203ENST00000585749 LRRC8DQ7L1W4 858 aa10.75□□□□□ -0.69
SDF2-203ENST00000585749 CCDC155Q8N6L0 562 aa10.75□□□□□ -0.69
SDF2-203ENST00000585749 DHX38Q92620 1227 aaKnown RBP10.75□□□□□ -0.69
SDF2-203ENST00000585749 MTA3Q9BTC8 594 aa10.75□□□□□ -0.69
SDF2-203ENST00000585749 UPF3BQ9BZI7 483 aaKnown RBP10.75□□□□□ -0.69
SDF2-203ENST00000585749 NOD1Q9Y239 953 aa10.75□□□□□ -0.69
SDF2-203ENST00000585749 ZFHX2Q9C0A1 2572 aaPredicted RBP10.74□□□□□ -0.69
SDF2-203ENST00000585749 DCHS1Q96JQ0 3298 aa10.74□□□□□ -0.69
SDF2-203ENST00000585749 ABHD14A-ACY1A0A1B0GW23 586 aa10.74□□□□□ -0.69
SDF2-203ENST00000585749 SELPP16109 830 aa10.74□□□□□ -0.69
SDF2-203ENST00000585749 ANTXR2P58335 489 aa10.74□□□□□ -0.69
SDF2-203ENST00000585749 RBL2Q08999 1139 aa10.74□□□□□ -0.69
SDF2-203ENST00000585749 WTAPQ15007 396 aa10.74□□□□□ -0.69
SDF2-203ENST00000585749 CDC37Q16543 378 aaPredicted RBP10.74□□□□□ -0.69
SDF2-203ENST00000585749 TCEAL5Q5H9L2 206 aa10.74□□□□□ -0.69
SDF2-203ENST00000585749 RNF20Q5VTR2 975 aa10.74□□□□□ -0.69
SDF2-203ENST00000585749 CREB3L3Q68CJ9 461 aa10.74□□□□□ -0.69
SDF2-203ENST00000585749 FAM117BQ6P1L5 589 aa10.74□□□□□ -0.69
SDF2-203ENST00000585749 BMP8AQ7Z5Y6 402 aa10.74□□□□□ -0.69
SDF2-203ENST00000585749 ADGRF4Q8IZF3 695 aa10.74□□□□□ -0.69
SDF2-203ENST00000585749 BANK1Q8NDB2 785 aa10.74□□□□□ -0.69
SDF2-203ENST00000585749 MICAL3Q7RTP6 2002 aa10.74□□□□□ -0.69
SDF2-203ENST00000585749 CACNA1HO95180 2353 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 NLRC5Q86WI3 1866 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 LOC102724159A0A0B4J2E5 919 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 NFIBO00712 420 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 GFRA3O60609 400 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 KPNA6O60684 536 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 PARNO95453 639 aaKnown RBP10.73□□□□□ -0.69
SDF2-203ENST00000585749 MCM5P33992 734 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 LTBRP36941 435 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 ALDH5A1P51649 535 aaPredicted RBP10.73□□□□□ -0.69
SDF2-203ENST00000585749 TROAPQ12815 778 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 GRM4Q14833 912 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 PWP2Q15269 919 aaKnown RBP10.73□□□□□ -0.69
SDF2-203ENST00000585749 SMAD2Q15796 467 aaKnown RBP10.73□□□□□ -0.69
SDF2-203ENST00000585749 PTPROQ16827 1216 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 BRDTQ58F21 947 aaPredicted RBP10.73□□□□□ -0.69
SDF2-203ENST00000585749 GDF6Q6KF10 455 aaPredicted RBP10.73□□□□□ -0.69
SDF2-203ENST00000585749 NSMFQ6X4W1 530 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 RNF135Q8IUD6 432 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 IGDCC4Q8TDY8 1250 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 CLEC4DQ8WXI8 215 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 EDAQ92838 391 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 TMEM87BQ96K49 555 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 PRRX2Q99811 253 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 UBA5Q9GZZ9 404 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 MAF1Q9H063 256 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 CPVLQ9H3G5 476 aa10.73□□□□□ -0.69
SDF2-203ENST00000585749 ALG13Q9NP73 1137 aaKnown RBP10.73□□□□□ -0.69
SDF2-203ENST00000585749 MAD2L2Q9UI95 211 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms