RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 CC2D1AQ6P1N0 951 aaPredicted RBP7.91□□□□□ -1.14
CDH8-214ENST00000585315 PCGF5Q86SE9 256 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 DNAJC10Q8IXB1 793 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 STAMBPL1Q96FJ0 436 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 SCYL1Q96KG9 808 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 CPSF1Q10570 1443 aaKnown RBP7.91□□□□□ -1.14
CDH8-214ENST00000585315 hCG_1642624A0A1W2PR95 340 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 GRID2IPA4D2P6 1211 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 ANXA13P27216 316 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 RWDD2BP57060 319 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 MAEAQ7L5Y9 396 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 DGKHQ86XP1 1220 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 HDAC11Q96DB2 347 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 PITPNM3Q9BZ71 974 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 KANSL2Q9H9L4 492 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 BATF3Q9NR55 127 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 EIF4A3P38919 411 aaKnown RBP7.91□□□□□ -1.14
CDH8-214ENST00000585315 IGBP1P78318 339 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 NUGGCQ68CJ6 796 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 FLAD1Q8NFF5 587 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 IL17REQ8NFR9 667 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.91□□□□□ -1.14
CDH8-214ENST00000585315 ACCSQ96QU6 501 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 MAN1B1Q9UKM7 699 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 PTCH1Q13635 1447 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 RESTQ13127 1097 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 NECTIN1Q15223 517 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 FAM102BQ5T8I3 360 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 HNRNPH2P55795 449 aaKnown RBP7.91□□□□□ -1.14
CDH8-214ENST00000585315 ABCB6Q9NP58 842 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 TTLL1O95922 423 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 SERPINB4P48594 390 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 RCN2Q14257 317 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 CRLF3Q8IUI8 442 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 DHX38Q92620 1227 aaKnown RBP7.91□□□□□ -1.14
CDH8-214ENST00000585315 TRIM15Q9C019 465 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 LEMD3Q9Y2U8 911 aa7.91□□□□□ -1.14
CDH8-214ENST00000585315 LGALS16A8MUM7 142 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 CA8P35219 290 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 MDM2Q00987 491 aaPredicted RBP7.9□□□□□ -1.14
CDH8-214ENST00000585315 CERKLQ49MI3 558 aaPredicted RBP7.9□□□□□ -1.14
CDH8-214ENST00000585315 FAM160B1Q5W0V3 765 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 CYP4F22Q6NT55 531 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 EDC3Q96F86 508 aaKnown RBP7.9□□□□□ -1.14
CDH8-214ENST00000585315 TRIM56Q9BRZ2 755 aaKnown RBP7.9□□□□□ -1.14
CDH8-214ENST00000585315 JAG2Q9Y219 1238 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 ANGPTL3Q9Y5C1 460 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 KIF1BO60333 1816 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 H0YIN7 160 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 ARL4AP40617 200 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 POLGP54098 1239 aaPredicted RBP7.9□□□□□ -1.14
CDH8-214ENST00000585315 FSCBQ5H9T9 825 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 FAM47AQ5JRC9 791 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 DNAJC24Q6P3W2 148 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 SCYL2Q6P3W7 929 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 RBM41Q96IZ5 413 aaKnown RBP7.9□□□□□ -1.14
CDH8-214ENST00000585315 OLFM3Q96PB7 478 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 PCDHA13Q9Y5I0 950 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 NDUFB9Q9Y6M9 179 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 MORC2Q9Y6X9 1032 aaPredicted RBP7.9□□□□□ -1.14
CDH8-214ENST00000585315 PFASO15067 1338 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 KLC3Q6P597 504 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 PIP4K2CQ8TBX8 421 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 LRRC37BQ96QE4 947 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 DISC1Q9NRI5 854 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 DDX39AO00148 427 aaKnown RBP7.9□□□□□ -1.14
CDH8-214ENST00000585315 KRT10P13645 584 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 E2F5Q15329 346 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 SPAG7O75391 227 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 TJP3O95049 919 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 ARHGEF16Q5VV41 709 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 PLEKHF1Q96S99 279 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 SLITRK6Q9H5Y7 841 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 YY1AP1Q9H869 796 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 PPCSQ9HAB8 311 aa7.9□□□□□ -1.14
CDH8-214ENST00000585315 CHEK2O96017 543 aa7.9□□□□□ -1.15
CDH8-214ENST00000585315 S100BP04271 92 aaPredicted RBP7.9□□□□□ -1.15
CDH8-214ENST00000585315 MMEP08473 750 aa7.9□□□□□ -1.15
CDH8-214ENST00000585315 IL6STP40189 918 aaPredicted RBP7.9□□□□□ -1.15
CDH8-214ENST00000585315 ART3Q13508 389 aa7.9□□□□□ -1.15
CDH8-214ENST00000585315 KRT31Q15323 416 aa7.9□□□□□ -1.15
CDH8-214ENST00000585315 SLFN13Q68D06 897 aa7.9□□□□□ -1.15
CDH8-214ENST00000585315 LARGE2Q8N3Y3 721 aa7.9□□□□□ -1.15
CDH8-214ENST00000585315 TRAIPQ9BWF2 469 aa7.9□□□□□ -1.15
CDH8-214ENST00000585315 EMILIN3Q9NT22 766 aa7.9□□□□□ -1.15
CDH8-214ENST00000585315 PIK3CAP42336 1068 aa7.9□□□□□ -1.15
CDH8-214ENST00000585315 DIXDC1Q155Q3 683 aa7.9□□□□□ -1.15
CDH8-214ENST00000585315 SYT2Q8N9I0 419 aaPredicted RBP7.9□□□□□ -1.15
CDH8-214ENST00000585315 CXorf38Q8TB03 319 aa7.9□□□□□ -1.15
CDH8-214ENST00000585315 NUDCD1Q96RS6 583 aa7.9□□□□□ -1.15
CDH8-214ENST00000585315 USP40Q9NVE5 1235 aa7.9□□□□□ -1.15
CDH8-214ENST00000585315 NOVA2Q9UNW9 492 aaKnown RBP7.9□□□□□ -1.15
CDH8-214ENST00000585315 MAP3K15Q6ZN16 1313 aa7.9□□□□□ -1.15
CDH8-214ENST00000585315 RPSAP08865 295 aaKnown RBP7.89□□□□□ -1.15
CDH8-214ENST00000585315 NAA35Q5VZE5 725 aa7.89□□□□□ -1.15
CDH8-214ENST00000585315 PYROXD1Q8WU10 500 aa7.89□□□□□ -1.15
CDH8-214ENST00000585315 PTPN22Q9Y2R2 807 aa7.89□□□□□ -1.15
CDH8-214ENST00000585315 A0A1W2PQC6 194 aa7.89□□□□□ -1.15
CDH8-214ENST00000585315 GMNCA6NCL1 334 aa7.89□□□□□ -1.15
CDH8-214ENST00000585315 SH2B2O14492 632 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms