RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 CHD7Q9P2D1 2997 aa12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 ERICH2A1L162 156 aa12.41□□□□□ -0.42
CSNK1D-226ENST00000585026 NCK2O43639 380 aa12.41□□□□□ -0.42
CSNK1D-226ENST00000585026 EIF5BO60841 1220 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-226ENST00000585026 RGS20O76081 388 aa12.41□□□□□ -0.42
CSNK1D-226ENST00000585026 UBA1P22314 1058 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-226ENST00000585026 NEDD9Q14511 834 aa12.41□□□□□ -0.42
CSNK1D-226ENST00000585026 MBTPS1Q14703 1052 aa12.41□□□□□ -0.42
CSNK1D-226ENST00000585026 TCTN1Q2MV58 587 aa12.41□□□□□ -0.42
CSNK1D-226ENST00000585026 PTCRAQ6ISU1 281 aaPredicted RBP12.41□□□□□ -0.42
CSNK1D-226ENST00000585026 C17orf80Q9BSJ5 609 aa12.41□□□□□ -0.42
CSNK1D-226ENST00000585026 C16orf70Q9BSU1 422 aa12.41□□□□□ -0.42
CSNK1D-226ENST00000585026 ZNF215Q9UL58 517 aaPredicted RBP12.41□□□□□ -0.42
CSNK1D-226ENST00000585026 H3BNC9 293 aa12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 OPLAHO14841 1288 aa12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 SMIM10L2AP0DMW4 78 aa12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 SMIM10L2BP0DMW5 78 aa12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 HOXA13P31271 388 aaPredicted RBP12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 GPM6BQ13491 265 aa12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 EPC2Q52LR7 807 aa12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 FCHSD1Q86WN1 690 aa12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 HOMER1Q86YM7 354 aa12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 STAG2Q8N3U4 1231 aa12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 BANK1Q8NDB2 785 aa12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 WNT8BQ93098 351 aa12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 TOP1MTQ969P6 601 aa12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 MTMR8Q96EF0 704 aa12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 RWDD3Q9Y3V2 267 aa12.4□□□□□ -0.42
CSNK1D-226ENST00000585026 TRIP12Q14669 1992 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 PNMA6FA0A0J9YX94 578 aa12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 PALM3A6NDB9 673 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 FAM86C2PA6NEL3 165 aa12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 GRXCR2A6NFK2 248 aa12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 SORBS3O60504 671 aa12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 LGALS2P05162 132 aa12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 SART3Q15020 963 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 METTL7BQ6UX53 244 aa12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 EP400NLQ6ZTU2 488 aa12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 TMEM192Q8IY95 271 aa12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 NEK9Q8TD19 979 aa12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 PABPC5Q96DU9 382 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 IFIH1Q9BYX4 1025 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 UPF3BQ9BZI7 483 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 RNPEPQ9H4A4 650 aa12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 NSUN3Q9H649 340 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 CD320Q9NPF0 282 aa12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 PRKAG3Q9UGI9 489 aa12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 MAD2L2Q9UI95 211 aa12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 RBM19Q9Y4C8 960 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-226ENST00000585026 TREHO43280 583 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 FIBPO43427 364 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 UPP2O95045 317 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 RB1P06400 928 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 IL9P15248 144 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 HOXC8P31273 242 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 ICAM3P32942 547 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 SP2Q02086 613 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 XRRA1Q6P2D8 792 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 RSPH3Q86UC2 560 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 GIMAP8Q8ND71 665 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 KHSRPQ92945 711 aaKnown RBP eCLIP12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 CUL5Q93034 780 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 IL17RAQ96F46 866 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 UIMC1Q96RL1 719 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 LMAN2LQ9H0V9 348 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 RIOX1Q9H6W3 641 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 C11orf16Q9NQ32 467 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 BRWD1Q9NSI6 2320 aa12.38□□□□□ -0.43
CSNK1D-226ENST00000585026 SPATA31C2B4DYI2 1134 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 H3BQ06 376 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 IFIT3O14879 490 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 DCXO43602 365 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 PPP1R11O60927 126 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 CDC45O75419 566 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 CTSHP09668 335 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 HIC1Q14526 733 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 GRM4Q14833 912 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 SEC23AQ15436 765 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 TCEAL5Q5H9L2 206 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 FAM26DQ5JW98 314 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 CYFIP1Q7L576 1253 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 NLRX1Q86UT6 975 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 FIBCD1Q8N539 461 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 IL31RAQ8NI17 732 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 INPP4AQ96PE3 977 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 PIGSQ96S52 555 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 POP1Q99575 1024 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 SENP7Q9BQF6 1050 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 C11orf84Q9BUA3 381 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 SETD4Q9NVD3 440 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 NRCAMQ92823 1304 aa12.37□□□□□ -0.43
CSNK1D-226ENST00000585026 RPLP2P05387 115 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-226ENST00000585026 ARHGAP4P98171 946 aa12.36□□□□□ -0.43
CSNK1D-226ENST00000585026 TAF2Q6P1X5 1199 aa12.36□□□□□ -0.43
CSNK1D-226ENST00000585026 CATIPQ7Z7H3 387 aa12.36□□□□□ -0.43
CSNK1D-226ENST00000585026 RALYLQ86SE5 291 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-226ENST00000585026 SMARCC2Q8TAQ2 1214 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms