RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 CYP46A1Q9Y6A2 500 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 EYSQ5T1H1 3165 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 hCG_1984214I3L0E3 225 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 STXBP3O00186 592 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 HAS3O00219 553 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 SORBS3O60504 671 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 PPFIA4O75335 1185 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 F2P00734 622 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 ZNF286BP0CG31 522 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 HOXD8P13378 290 aaPredicted RBP20.48■□□□□ 0.87
ERBB2-221ENST00000584888 SEMA3FQ13275 785 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 MFSD10Q14728 455 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 KIAA0753Q2KHM9 967 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 PCNX4Q63HM2 1172 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 PPP1R18Q6NYC8 613 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 CCDC155Q8N6L0 562 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 ZNF713Q8N859 430 aaPredicted RBP20.48■□□□□ 0.87
ERBB2-221ENST00000584888 AFAP1L1Q8TED9 768 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 DHX38Q92620 1227 aaKnown RBP20.48■□□□□ 0.87
ERBB2-221ENST00000584888 SPATA33Q96N06 139 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 KATNAL1Q9BW62 490 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 BARHL2Q9NY43 387 aa20.48■□□□□ 0.87
ERBB2-221ENST00000584888 GGPS1O95749 300 aa20.47■□□□□ 0.87
ERBB2-221ENST00000584888 PKN1Q16512 942 aa20.47■□□□□ 0.87
ERBB2-221ENST00000584888 UBE2SQ16763 222 aa20.47■□□□□ 0.87
ERBB2-221ENST00000584888 HSDL1Q3SXM5 330 aa20.47■□□□□ 0.87
ERBB2-221ENST00000584888 PPP2R2DQ66LE6 453 aa20.47■□□□□ 0.87
ERBB2-221ENST00000584888 PPM1EQ8WY54 764 aa20.47■□□□□ 0.87
ERBB2-221ENST00000584888 RIC8AQ9NPQ8 531 aa20.47■□□□□ 0.87
ERBB2-221ENST00000584888 NAP1L2Q9ULW6 460 aaPredicted RBP20.47■□□□□ 0.87
ERBB2-221ENST00000584888 GBF1Q92538 1859 aa20.46■□□□□ 0.87
ERBB2-221ENST00000584888 DOCK5Q9H7D0 1870 aa20.46■□□□□ 0.87
ERBB2-221ENST00000584888 SPATA31C2B4DYI2 1134 aa20.46■□□□□ 0.87
ERBB2-221ENST00000584888 PRPF3O43395 683 aaKnown RBP20.46■□□□□ 0.87
ERBB2-221ENST00000584888 SELPP16109 830 aa20.46■□□□□ 0.87
ERBB2-221ENST00000584888 UBA1P22314 1058 aaKnown RBP20.46■□□□□ 0.87
ERBB2-221ENST00000584888 IGFBP4P22692 258 aa20.46■□□□□ 0.87
ERBB2-221ENST00000584888 ANAPC15P60006 121 aa20.46■□□□□ 0.87
ERBB2-221ENST00000584888 GPNMBQ14956 572 aa20.46■□□□□ 0.87
ERBB2-221ENST00000584888 PFKFB3Q16875 520 aaPredicted RBP20.46■□□□□ 0.87
ERBB2-221ENST00000584888 LRRC8DQ7L1W4 858 aa20.46■□□□□ 0.87
ERBB2-221ENST00000584888 PHOSPHO2Q8TCD6 241 aa20.46■□□□□ 0.87
ERBB2-221ENST00000584888 ZNF274Q96GC6 653 aaPredicted RBP20.46■□□□□ 0.87
ERBB2-221ENST00000584888 SLC9A7Q96T83 725 aa20.46■□□□□ 0.87
ERBB2-221ENST00000584888 UPF3BQ9BZI7 483 aaKnown RBP20.46■□□□□ 0.87
ERBB2-221ENST00000584888 TRIP12Q14669 1992 aaPredicted RBP20.46■□□□□ 0.87
ERBB2-221ENST00000584888 PRUNE2Q8WUY3 3088 aa20.46■□□□□ 0.87
ERBB2-221ENST00000584888 IFNAR1P17181 557 aa20.45■□□□□ 0.86
ERBB2-221ENST00000584888 RBL2Q08999 1139 aa20.45■□□□□ 0.86
ERBB2-221ENST00000584888 BCAS3Q9H6U6 928 aa20.45■□□□□ 0.86
ERBB2-221ENST00000584888 MLXIPQ9HAP2 919 aa20.45■□□□□ 0.86
ERBB2-221ENST00000584888 PRDM6Q9NQX0 595 aa20.45■□□□□ 0.86
ERBB2-221ENST00000584888 PCDHA6Q9UN73 950 aa20.45■□□□□ 0.86
ERBB2-221ENST00000584888 PCDHA8Q9Y5H6 950 aa20.45■□□□□ 0.86
ERBB2-221ENST00000584888 TET1Q8NFU7 2136 aa20.45■□□□□ 0.86
ERBB2-221ENST00000584888 SEC24BO95487 1268 aa20.44■□□□□ 0.86
ERBB2-221ENST00000584888 CKBP12277 381 aa20.44■□□□□ 0.86
ERBB2-221ENST00000584888 SCG2P13521 617 aa20.44■□□□□ 0.86
ERBB2-221ENST00000584888 CLK2P49760 499 aaKnown RBP20.44■□□□□ 0.86
ERBB2-221ENST00000584888 NAPAP54920 295 aa20.44■□□□□ 0.86
ERBB2-221ENST00000584888 ZNF200P98182 395 aaPredicted RBP20.44■□□□□ 0.86
ERBB2-221ENST00000584888 PTK7Q13308 1070 aa20.44■□□□□ 0.86
ERBB2-221ENST00000584888 GNPTABQ3T906 1256 aa20.44■□□□□ 0.86
ERBB2-221ENST00000584888 C16orf70Q9BSU1 422 aa20.44■□□□□ 0.86
ERBB2-221ENST00000584888 RTEL1Q9NZ71 1219 aa20.44■□□□□ 0.86
ERBB2-221ENST00000584888 SMCO2A6NFE2 343 aa20.43■□□□□ 0.86
ERBB2-221ENST00000584888 FIBPO43427 364 aa20.43■□□□□ 0.86
ERBB2-221ENST00000584888 BAIAP3O94812 1187 aa20.43■□□□□ 0.86
ERBB2-221ENST00000584888 PARNO95453 639 aaKnown RBP20.43■□□□□ 0.86
ERBB2-221ENST00000584888 CA3P07451 260 aa20.43■□□□□ 0.86
ERBB2-221ENST00000584888 HIC1Q14526 733 aa20.43■□□□□ 0.86
ERBB2-221ENST00000584888 CCDC85BQ15834 202 aaPredicted RBP20.43■□□□□ 0.86
ERBB2-221ENST00000584888 TRIM71Q2Q1W2 868 aaKnown RBP20.43■□□□□ 0.86
ERBB2-221ENST00000584888 HERC6Q8IVU3 1022 aa20.43■□□□□ 0.86
ERBB2-221ENST00000584888 SENP7Q9BQF6 1050 aa20.43■□□□□ 0.86
ERBB2-221ENST00000584888 GLT8D2Q9H1C3 349 aa20.43■□□□□ 0.86
ERBB2-221ENST00000584888 NCOA5Q9HCD5 579 aaKnown RBP20.43■□□□□ 0.86
ERBB2-221ENST00000584888 PDRG1Q9NUG6 133 aa20.43■□□□□ 0.86
ERBB2-221ENST00000584888 UBIAD1Q9Y5Z9 338 aa20.43■□□□□ 0.86
ERBB2-221ENST00000584888 TANC1Q9C0D5 1861 aa20.43■□□□□ 0.86
ERBB2-221ENST00000584888 ESYT2A0FGR8 921 aa20.42■□□□□ 0.86
ERBB2-221ENST00000584888 NBNO60934 754 aa20.42■□□□□ 0.86
ERBB2-221ENST00000584888 ITGB5P18084 799 aa20.42■□□□□ 0.86
ERBB2-221ENST00000584888 ADCY7P51828 1080 aa20.42■□□□□ 0.86
ERBB2-221ENST00000584888 CCT2P78371 535 aaKnown RBP20.42■□□□□ 0.86
ERBB2-221ENST00000584888 WNT8BQ93098 351 aa20.42■□□□□ 0.86
ERBB2-221ENST00000584888 PHKBQ93100 1093 aa20.42■□□□□ 0.86
ERBB2-221ENST00000584888 LARP6Q9BRS8 491 aaKnown RBP20.42■□□□□ 0.86
ERBB2-221ENST00000584888 RNF26Q9BY78 433 aaPredicted RBP20.42■□□□□ 0.86
ERBB2-221ENST00000584888 ZMYND12Q9H0C1 365 aa20.42■□□□□ 0.86
ERBB2-221ENST00000584888 CHD9Q3L8U1 2897 aa20.41■□□□□ 0.86
ERBB2-221ENST00000584888 SPDYE3A6NKU9 549 aa20.41■□□□□ 0.86
ERBB2-221ENST00000584888 KIF28PB7ZC32 967 aa20.41■□□□□ 0.86
ERBB2-221ENST00000584888 ADAMTS3O15072 1205 aa20.41■□□□□ 0.86
ERBB2-221ENST00000584888 EIF5BO60841 1220 aaKnown RBP20.41■□□□□ 0.86
ERBB2-221ENST00000584888 FOSP01100 380 aaPredicted RBP20.41■□□□□ 0.86
ERBB2-221ENST00000584888 CXCL10P02778 98 aa20.41■□□□□ 0.86
ERBB2-221ENST00000584888 NEDD9Q14511 834 aa20.41■□□□□ 0.86
ERBB2-221ENST00000584888 SYMPKQ92797 1274 aaKnown RBP20.41■□□□□ 0.86
ERBB2-221ENST00000584888 GPRASP2Q96D09 838 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms