RNA–Protein interactions for RNA: ENST00000584527.1

SPECC1-223, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3 BASIC

Gene SPECC1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-223ENST00000584527 HDAC6Q9UBN7 1215 aa17.45■□□□□ 0.38
SPECC1-223ENST00000584527 PCDHA1Q9Y5I3 950 aa17.45■□□□□ 0.38
SPECC1-223ENST00000584527 TRIP12Q14669 1992 aaPredicted RBP17.44■□□□□ 0.38
SPECC1-223ENST00000584527 EVCP57679 992 aa17.44■□□□□ 0.38
SPECC1-223ENST00000584527 APOBRQ0VD83 1088 aa17.44■□□□□ 0.38
SPECC1-223ENST00000584527 PGM5Q15124 567 aa17.44■□□□□ 0.38
SPECC1-223ENST00000584527 KIAA0753Q2KHM9 967 aa17.44■□□□□ 0.38
SPECC1-223ENST00000584527 TRIM71Q2Q1W2 868 aaKnown RBP17.44■□□□□ 0.38
SPECC1-223ENST00000584527 MYSM1Q5VVJ2 828 aa17.44■□□□□ 0.38
SPECC1-223ENST00000584527 MICU3Q86XE3 530 aa17.44■□□□□ 0.38
SPECC1-223ENST00000584527 DHX37Q8IY37 1157 aaKnown RBP17.44■□□□□ 0.38
SPECC1-223ENST00000584527 C22orf23Q9BZE7 217 aa17.44■□□□□ 0.38
SPECC1-223ENST00000584527 COG5Q9UP83 839 aa17.44■□□□□ 0.38
SPECC1-223ENST00000584527 NCOR1O75376 2440 aa17.44■□□□□ 0.38
SPECC1-223ENST00000584527 COL4A4P53420 1690 aaPredicted RBP17.43■□□□□ 0.38
SPECC1-223ENST00000584527 XIRP2A4UGR9 3374 aa17.43■□□□□ 0.38
SPECC1-223ENST00000584527 CCDC196A0A1B0GTZ2 297 aa17.43■□□□□ 0.38
SPECC1-223ENST00000584527 ABHD14A-ACY1A0A1B0GW23 586 aa17.43■□□□□ 0.38
SPECC1-223ENST00000584527 EPOPA6NHQ4 379 aa17.43■□□□□ 0.38
SPECC1-223ENST00000584527 TLL1O43897 1013 aa17.43■□□□□ 0.38
SPECC1-223ENST00000584527 NBNO60934 754 aa17.43■□□□□ 0.38
SPECC1-223ENST00000584527 ARHGEF15O94989 841 aa17.43■□□□□ 0.38
SPECC1-223ENST00000584527 ZNF286BP0CG31 522 aa17.43■□□□□ 0.38
SPECC1-223ENST00000584527 BMP1P13497 986 aa17.43■□□□□ 0.38
SPECC1-223ENST00000584527 RBM25P49756 843 aaKnown RBP17.43■□□□□ 0.38
SPECC1-223ENST00000584527 CHMP4BP1P59074 171 aa17.43■□□□□ 0.38
SPECC1-223ENST00000584527 RTN1Q16799 776 aa17.43■□□□□ 0.38
SPECC1-223ENST00000584527 CELF3Q5SZQ8 465 aaKnown RBP17.43■□□□□ 0.38
SPECC1-223ENST00000584527 TRAF7Q6Q0C0 670 aa17.43■□□□□ 0.38
SPECC1-223ENST00000584527 LMCD1Q9NZU5 365 aa17.43■□□□□ 0.38
SPECC1-223ENST00000584527 FRMPD4Q14CM0 1322 aa17.43■□□□□ 0.38
SPECC1-223ENST00000584527 PRRC2BQ5JSZ5 2229 aaKnown RBP17.43■□□□□ 0.38
SPECC1-223ENST00000584527 NID2Q14112 1375 aa17.42■□□□□ 0.38
SPECC1-223ENST00000584527 REV3LO60673 3130 aa17.42■□□□□ 0.38
SPECC1-223ENST00000584527 GOLGA8AA7E2F4 631 aa17.42■□□□□ 0.38
SPECC1-223ENST00000584527 GOLGA8BA8MQT2 603 aa17.42■□□□□ 0.38
SPECC1-223ENST00000584527 CYTH3O43739 400 aa17.42■□□□□ 0.38
SPECC1-223ENST00000584527 GJB5O95377 273 aa17.42■□□□□ 0.38
SPECC1-223ENST00000584527 RXRAP19793 462 aa17.42■□□□□ 0.38
SPECC1-223ENST00000584527 HOXC8P31273 242 aa17.42■□□□□ 0.38
SPECC1-223ENST00000584527 TOB2Q14106 344 aaPredicted RBP17.42■□□□□ 0.38
SPECC1-223ENST00000584527 ANKRD1Q15327 319 aa17.42■□□□□ 0.38
SPECC1-223ENST00000584527 SLC35G1Q2M3R5 365 aa17.42■□□□□ 0.38
SPECC1-223ENST00000584527 HSDL1Q3SXM5 330 aa17.42■□□□□ 0.38
SPECC1-223ENST00000584527 TMTC3Q6ZXV5 915 aa17.42■□□□□ 0.38
SPECC1-223ENST00000584527 MICALL1Q8N3F8 863 aa17.42■□□□□ 0.38
SPECC1-223ENST00000584527 ARNTL2Q8WYA1 636 aa17.42■□□□□ 0.38
SPECC1-223ENST00000584527 NAP1L2Q9ULW6 460 aaPredicted RBP17.42■□□□□ 0.38
SPECC1-223ENST00000584527 EMSYQ7Z589 1322 aa17.42■□□□□ 0.38
SPECC1-223ENST00000584527 BDP1A6H8Y1 2624 aa17.41■□□□□ 0.38
SPECC1-223ENST00000584527 PNMA6FA0A0J9YX94 578 aa17.41■□□□□ 0.38
SPECC1-223ENST00000584527 GCOM1H8Y6P7 765 aaPredicted RBP17.41■□□□□ 0.38
SPECC1-223ENST00000584527 RFXAPO00287 272 aa17.41■□□□□ 0.38
SPECC1-223ENST00000584527 STAM2O75886 525 aa17.41■□□□□ 0.38
SPECC1-223ENST00000584527 GGPS1O95749 300 aa17.41■□□□□ 0.38
SPECC1-223ENST00000584527 POLR2MP0CAP2 368 aa17.41■□□□□ 0.38
SPECC1-223ENST00000584527 UBA1P22314 1058 aaKnown RBP17.41■□□□□ 0.38
SPECC1-223ENST00000584527 CCND2P30279 289 aa17.41■□□□□ 0.38
SPECC1-223ENST00000584527 METAP2P50579 478 aaKnown RBP eCLIP17.41■□□□□ 0.38
SPECC1-223ENST00000584527 RAB11FIP4Q86YS3 637 aa17.41■□□□□ 0.38
SPECC1-223ENST00000584527 SRBD1Q8N5C6 995 aaKnown RBP17.41■□□□□ 0.38
SPECC1-223ENST00000584527 IL31RAQ8NI17 732 aa17.41■□□□□ 0.38
SPECC1-223ENST00000584527 RRP36Q96EU6 259 aaKnown RBP17.41■□□□□ 0.38
SPECC1-223ENST00000584527 ZNF274Q96GC6 653 aaPredicted RBP17.41■□□□□ 0.38
SPECC1-223ENST00000584527 SPATA33Q96N06 139 aa17.41■□□□□ 0.38
SPECC1-223ENST00000584527 C16orf70Q9BSU1 422 aa17.41■□□□□ 0.38
SPECC1-223ENST00000584527 ALG1Q9BT22 464 aa17.41■□□□□ 0.38
SPECC1-223ENST00000584527 LPXNO60711 386 aa17.4■□□□□ 0.38
SPECC1-223ENST00000584527 PLEKHA8P1O95397 391 aa17.4■□□□□ 0.38
SPECC1-223ENST00000584527 MYCLP12524 364 aaPredicted RBP17.4■□□□□ 0.38
SPECC1-223ENST00000584527 HOXA13P31271 388 aaPredicted RBP17.4■□□□□ 0.38
SPECC1-223ENST00000584527 DEFB103AP81534 67 aa17.4■□□□□ 0.38
SPECC1-223ENST00000584527 TFF2Q03403 129 aa17.4■□□□□ 0.38
SPECC1-223ENST00000584527 GRB10Q13322 594 aa17.4■□□□□ 0.38
SPECC1-223ENST00000584527 MKRN4PQ13434 485 aaPredicted RBP17.4■□□□□ 0.38
SPECC1-223ENST00000584527 SERINC5Q86VE9 423 aa17.4■□□□□ 0.38
SPECC1-223ENST00000584527 PIGSQ96S52 555 aa17.4■□□□□ 0.38
SPECC1-223ENST00000584527 RAD9AQ99638 391 aa17.4■□□□□ 0.38
SPECC1-223ENST00000584527 BACH2Q9BYV9 841 aa17.4■□□□□ 0.38
SPECC1-223ENST00000584527 CERS4Q9HA82 394 aa17.4■□□□□ 0.38
SPECC1-223ENST00000584527 COL4A6Q14031 1691 aa17.39■□□□□ 0.37
SPECC1-223ENST00000584527 MYH7BA7E2Y1 1941 aa17.39■□□□□ 0.37
SPECC1-223ENST00000584527 BAZ2BQ9UIF8 2168 aaKnown RBP17.39■□□□□ 0.37
SPECC1-223ENST00000584527 LCHNA4D1U4 455 aa17.39■□□□□ 0.37
SPECC1-223ENST00000584527 PDIA3P30101 505 aaKnown RBP17.39■□□□□ 0.37
SPECC1-223ENST00000584527 ICAM3P32942 547 aa17.39■□□□□ 0.37
SPECC1-223ENST00000584527 SP2Q02086 613 aa17.39■□□□□ 0.37
SPECC1-223ENST00000584527 IKBKEQ14164 716 aa17.39■□□□□ 0.37
SPECC1-223ENST00000584527 MBTPS1Q14703 1052 aa17.39■□□□□ 0.37
SPECC1-223ENST00000584527 SKIV2LQ15477 1246 aaKnown RBP17.39■□□□□ 0.37
SPECC1-223ENST00000584527 GNPTABQ3T906 1256 aa17.39■□□□□ 0.37
SPECC1-223ENST00000584527 ZNF618Q5T7W0 954 aa17.39■□□□□ 0.37
SPECC1-223ENST00000584527 HOMER1Q86YM7 354 aa17.39■□□□□ 0.37
SPECC1-223ENST00000584527 WNT8BQ93098 351 aa17.39■□□□□ 0.37
SPECC1-223ENST00000584527 INPP4AQ96PE3 977 aaPredicted RBP17.39■□□□□ 0.37
SPECC1-223ENST00000584527 ZBED2Q9BTP6 218 aa17.39■□□□□ 0.37
SPECC1-223ENST00000584527 FAM217BQ9NTX9 383 aaPredicted RBP17.39■□□□□ 0.37
SPECC1-223ENST00000584527 SEC63Q9UGP8 760 aaKnown RBP17.39■□□□□ 0.37
SPECC1-223ENST00000584527 CAND2O75155 1236 aa17.38■□□□□ 0.37
SPECC1-223ENST00000584527 LGR5O75473 907 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms