RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 KIAA0753Q2KHM9 967 aa31■■■□□ 2.55
SMARCD2-210ENST00000584400 GPR20Q99678 358 aa31■■■□□ 2.55
SMARCD2-210ENST00000584400 LTBP2Q14767 1821 aa31■■■□□ 2.55
SMARCD2-210ENST00000584400 DNAH12Q6ZR08 3092 aa31■■■□□ 2.55
SMARCD2-210ENST00000584400 HAS3O00219 553 aa30.99■■■□□ 2.55
SMARCD2-210ENST00000584400 KCNA2P16389 499 aa30.99■■■□□ 2.55
SMARCD2-210ENST00000584400 XBP1P17861 261 aa30.99■■■□□ 2.55
SMARCD2-210ENST00000584400 ALG1Q9BT22 464 aa30.99■■■□□ 2.55
SMARCD2-210ENST00000584400 NOC4LQ9BVI4 516 aaKnown RBP30.99■■■□□ 2.55
SMARCD2-210ENST00000584400 C22orf23Q9BZE7 217 aa30.99■■■□□ 2.55
SMARCD2-210ENST00000584400 KCNH7Q9NS40 1196 aa30.99■■■□□ 2.55
SMARCD2-210ENST00000584400 ZNF215Q9UL58 517 aaPredicted RBP30.99■■■□□ 2.55
SMARCD2-210ENST00000584400 PTGISQ16647 500 aa30.98■■■□□ 2.55
SMARCD2-210ENST00000584400 GALNT17Q6IS24 598 aa30.98■■■□□ 2.55
SMARCD2-210ENST00000584400 NIPA1Q7RTP0 329 aa30.98■■■□□ 2.55
SMARCD2-210ENST00000584400 CCDC155Q8N6L0 562 aa30.98■■■□□ 2.55
SMARCD2-210ENST00000584400 C16orf70Q9BSU1 422 aa30.98■■■□□ 2.55
SMARCD2-210ENST00000584400 GTF2IRD1Q9UHL9 959 aa30.98■■■□□ 2.55
SMARCD2-210ENST00000584400 H3BRB1 525 aa30.97■■■□□ 2.55
SMARCD2-210ENST00000584400 ATP9AO75110 1047 aa30.97■■■□□ 2.55
SMARCD2-210ENST00000584400 LGALS2P05162 132 aa30.97■■■□□ 2.55
SMARCD2-210ENST00000584400 CYP3A4P08684 503 aa30.97■■■□□ 2.55
SMARCD2-210ENST00000584400 CYP2C18P33260 490 aa30.97■■■□□ 2.55
SMARCD2-210ENST00000584400 BFSP2Q13515 415 aa30.97■■■□□ 2.55
SMARCD2-210ENST00000584400 SDF4Q9BRK5 362 aa30.97■■■□□ 2.55
SMARCD2-210ENST00000584400 TUT1Q9H6E5 874 aaKnown RBP30.97■■■□□ 2.55
SMARCD2-210ENST00000584400 BCAS3Q9H6U6 928 aa30.97■■■□□ 2.55
SMARCD2-210ENST00000584400 SCN10AQ9Y5Y9 1956 aa30.97■■■□□ 2.55
SMARCD2-210ENST00000584400 STK36Q9NRP7 1315 aa30.97■■■□□ 2.55
SMARCD2-210ENST00000584400 CYP2C9P11712 490 aa30.96■■■□□ 2.55
SMARCD2-210ENST00000584400 SP4Q02446 784 aa30.96■■■□□ 2.55
SMARCD2-210ENST00000584400 SHHQ15465 462 aa30.96■■■□□ 2.55
SMARCD2-210ENST00000584400 RETREG2Q8NC44 543 aa30.96■■■□□ 2.55
SMARCD2-210ENST00000584400 SEPT1Q8WYJ6 367 aa30.96■■■□□ 2.55
SMARCD2-210ENST00000584400 WASF1Q92558 559 aa30.96■■■□□ 2.55
SMARCD2-210ENST00000584400 UPF2Q9HAU5 1272 aaKnown RBP30.96■■■□□ 2.55
SMARCD2-210ENST00000584400 HDAC6Q9UBN7 1215 aa30.96■■■□□ 2.55
SMARCD2-210ENST00000584400 PCDHA4Q9UN74 947 aa30.96■■■□□ 2.55
SMARCD2-210ENST00000584400 MEIS1O00470 390 aa30.95■■■□□ 2.55
SMARCD2-210ENST00000584400 CSF2RAP15509 400 aa30.95■■■□□ 2.55
SMARCD2-210ENST00000584400 JPH1Q9HDC5 661 aaPredicted RBP30.95■■■□□ 2.55
SMARCD2-210ENST00000584400 PKD2L1Q9P0L9 805 aa30.95■■■□□ 2.55
SMARCD2-210ENST00000584400 PITPNM1O00562 1244 aa30.94■■■□□ 2.54
SMARCD2-210ENST00000584400 SETQ01105 290 aaPredicted RBP30.94■■■□□ 2.54
SMARCD2-210ENST00000584400 GDF6Q6KF10 455 aaPredicted RBP30.94■■■□□ 2.54
SMARCD2-210ENST00000584400 PSRC1Q6PGN9 363 aaPredicted RBP30.94■■■□□ 2.54
SMARCD2-210ENST00000584400 RPUSD2Q8IZ73 545 aaKnown RBP30.94■■■□□ 2.54
SMARCD2-210ENST00000584400 CYP2W1Q8TAV3 490 aa30.94■■■□□ 2.54
SMARCD2-210ENST00000584400 CAGE1Q8TC20 777 aa30.94■■■□□ 2.54
SMARCD2-210ENST00000584400 PPP1R13LQ8WUF5 828 aa30.94■■■□□ 2.54
SMARCD2-210ENST00000584400 NFASCO94856 1347 aa30.94■■■□□ 2.54
SMARCD2-210ENST00000584400 TCF7P36402 384 aaPredicted RBP30.93■■■□□ 2.54
SMARCD2-210ENST00000584400 CCL23P55773 120 aa30.93■■■□□ 2.54
SMARCD2-210ENST00000584400 ME3Q16798 604 aa30.93■■■□□ 2.54
SMARCD2-210ENST00000584400 C9orf50Q5SZB4 431 aa30.93■■■□□ 2.54
SMARCD2-210ENST00000584400 CRYGNQ8WXF5 182 aa30.93■■■□□ 2.54
SMARCD2-210ENST00000584400 GTF3C6Q969F1 213 aa30.93■■■□□ 2.54
SMARCD2-210ENST00000584400 RNPC3Q96LT9 517 aaKnown RBP30.93■■■□□ 2.54
SMARCD2-210ENST00000584400 AGO4Q9HCK5 861 aaKnown RBP30.93■■■□□ 2.54
SMARCD2-210ENST00000584400 IL23AQ9NPF7 189 aa30.93■■■□□ 2.54
SMARCD2-210ENST00000584400 SLC9A2Q9UBY0 812 aa30.93■■■□□ 2.54
SMARCD2-210ENST00000584400 EPHB4P54760 987 aa30.92■■■□□ 2.54
SMARCD2-210ENST00000584400 UTP14CQ5TAP6 766 aaKnown RBP30.92■■■□□ 2.54
SMARCD2-210ENST00000584400 GPR153Q6NV75 609 aa30.92■■■□□ 2.54
SMARCD2-210ENST00000584400 PLA2G4DQ86XP0 818 aa30.92■■■□□ 2.54
SMARCD2-210ENST00000584400 UMODL1Q5DID0 1318 aa30.92■■■□□ 2.54
SMARCD2-210ENST00000584400 PFKMP08237 780 aa30.91■■■□□ 2.54
SMARCD2-210ENST00000584400 ARP10275 920 aa30.91■■■□□ 2.54
SMARCD2-210ENST00000584400 GNAT1P11488 350 aa30.91■■■□□ 2.54
SMARCD2-210ENST00000584400 USP11P51784 963 aa30.91■■■□□ 2.54
SMARCD2-210ENST00000584400 BLIDQ8IZY5 108 aa30.91■■■□□ 2.54
SMARCD2-210ENST00000584400 DAGLBQ8NCG7 672 aa30.91■■■□□ 2.54
SMARCD2-210ENST00000584400 RASGRP4Q8TDF6 673 aa30.91■■■□□ 2.54
SMARCD2-210ENST00000584400 MTIF3Q9H2K0 278 aaKnown RBP30.91■■■□□ 2.54
SMARCD2-210ENST00000584400 FAM86B1E9PN63 330 aa30.9■■■□□ 2.54
SMARCD2-210ENST00000584400 FAM86B2P0C5J1 330 aa30.9■■■□□ 2.54
SMARCD2-210ENST00000584400 RFC2P35250 354 aa30.9■■■□□ 2.54
SMARCD2-210ENST00000584400 PTK7Q13308 1070 aa30.9■■■□□ 2.54
SMARCD2-210ENST00000584400 WNT8AQ9H1J5 351 aa30.9■■■□□ 2.54
SMARCD2-210ENST00000584400 ORC3Q9UBD5 711 aaPredicted RBP30.9■■■□□ 2.54
SMARCD2-210ENST00000584400 LIMCH1Q9UPQ0 1083 aa30.9■■■□□ 2.54
SMARCD2-210ENST00000584400 C17orf102A2RUQ5 167 aa30.89■■■□□ 2.54
SMARCD2-210ENST00000584400 SOX1O00570 391 aaPredicted RBP30.89■■■□□ 2.54
SMARCD2-210ENST00000584400 SLC34A2O95436 690 aa30.89■■■□□ 2.54
SMARCD2-210ENST00000584400 CIITAP33076 1130 aa30.89■■■□□ 2.54
SMARCD2-210ENST00000584400 RBM25P49756 843 aaKnown RBP30.89■■■□□ 2.54
SMARCD2-210ENST00000584400 NECAB1Q8N987 351 aa30.89■■■□□ 2.54
SMARCD2-210ENST00000584400 IL27Q8NEV9 243 aa30.89■■■□□ 2.54
SMARCD2-210ENST00000584400 AFAP1L1Q8TED9 768 aa30.89■■■□□ 2.54
SMARCD2-210ENST00000584400 TNPO1Q92973 898 aaKnown RBP30.89■■■□□ 2.54
SMARCD2-210ENST00000584400 SMARCAD1Q9H4L7 1026 aa30.89■■■□□ 2.54
SMARCD2-210ENST00000584400 ERAP1Q9NZ08 941 aa30.89■■■□□ 2.54
SMARCD2-210ENST00000584400 GSTTP1A0A1W2PQM5 241 aa30.88■■■□□ 2.53
SMARCD2-210ENST00000584400 PARNO95453 639 aaKnown RBP30.88■■■□□ 2.53
SMARCD2-210ENST00000584400 GLG1Q92896 1179 aa30.88■■■□□ 2.53
SMARCD2-210ENST00000584400 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.88■■■□□ 2.538e-10■■■■□ 20
SMARCD2-210ENST00000584400 AZI2Q9H6S1 392 aa30.88■■■□□ 2.53
SMARCD2-210ENST00000584400 TBC1D22BQ9NU19 505 aa30.88■■■□□ 2.53
SMARCD2-210ENST00000584400 TCEAL9Q9UHQ7 104 aa30.88■■■□□ 2.53
SMARCD2-210ENST00000584400 TRIOBPQ9H2D6 2365 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms