RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	CA8	P35219	290 aa		12.82	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	PBX1	P40424	430 aa		12.82	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	PAK1	Q13153	545 aa		12.82	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	KCTD2	Q14681	263 aa		12.82	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	C4orf32	Q8N8J7	132 aa		12.82	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CNKSR1	Q969H4	720 aa		12.82	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	MMS19	Q96T76	1030 aa		12.82	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	POLR3C	Q9BUI4	534 aa	Predicted RBP	12.82	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	UBXN6	Q9BZV1	441 aa		12.82	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	AGPAT5	Q9NUQ2	364 aa		12.82	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	REXO2	Q9Y3B8	237 aa	Known RBP	12.82	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	GPR75-ASB3	A0A0A6YYF3	556 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	RAD17	O75943	681 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	MYBL2	P10244	700 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	STIP1	P31948	543 aa	Known RBP	12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	RCAN1	P53805	252 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	GPS2	Q13227	327 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CASP8	Q14790	479 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	SOGA3	Q5TF21	947 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	C15orf52	Q6ZUT6	534 aa	Known RBP	12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	UBE2Q1	Q7Z7E8	422 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	ANKRD13B	Q86YJ7	626 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	BLID	Q8IZY5	108 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	MAD2L2	Q9UI95	211 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	TMCC3	Q9ULS5	477 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	FLT1	P17948	1338 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063		B4DLN1	442 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	TOMM20	Q15388	145 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	HSP90B2P	Q58FF3	399 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	TCP11X2	Q5H9J9	407 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	ALKBH2	Q6NS38	261 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	USP17L2	Q6R6M4	530 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	TXLNB	Q8N3L3	684 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	ANKRD31	Q8N7Z5	1873 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	IFT122	Q9HBG6	1241 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	RCCD1	A6NED2	376 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	STAT6	P42226	847 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	WASHC5	Q12768	1159 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	NFIA	Q12857	509 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CCDC122	Q5T0U0	273 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	KRT26	Q7Z3Y9	468 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	NT5DC4	Q86YG4	428 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CNGA4	Q8IV77	575 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	IQUB	Q8NA54	791 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	FERMT2	Q96AC1	680 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	GSDMA	Q96QA5	445 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	MYO6	Q9UM54	1294 aa		12.81	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	RPN1	P04843	607 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	PARP1	P09874	1014 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	FOSL1	P15407	271 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	DPEP1	P16444	411 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CDK8	P49336	464 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	EGFLAM	Q63HQ2	1017 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	HDX	Q7Z353	690 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CEP112	Q8N8E3	955 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	TEKT1	Q969V4	418 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CEP63	Q96MT8	703 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	LACRT	Q9GZZ8	138 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	DDX4	Q9NQI0	724 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	EHD2	Q9NZN4	543 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	PCDHA6	Q9UN73	950 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	L1RE1	Q9UN81	338 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	PCDHA8	Q9Y5H6	950 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	EPN1	Q9Y6I3	576 aa	Predicted RBP	12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	SCIN	Q9Y6U3	715 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	MAP2K7	O14733	419 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	PLEK	P08567	350 aa	Predicted RBP	12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CALM1	P0DP23	149 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CALM2	P0DP24	149 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CALM3	P0DP25	149 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CD53	P19397	219 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CXCR5	P32302	372 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	IRF2BP1	Q8IU81	584 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	ANKRD13C	Q8N6S4	541 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	GJA10	Q969M2	543 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	DDX27	Q96GQ7	796 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	TRIM47	Q96LD4	638 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	TMEM47	Q9BQJ4	181 aa		12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	SCAF8	Q9UPN6	1271 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	MTA2	O94776	668 aa		12.79	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	PLCG2	P16885	1265 aa		12.79	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	ZNF16	P17020	682 aa	Predicted RBP	12.79	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	TTLL6	Q8N841	843 aa		12.79	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	SLC7A5P2	Q9GIP4	190 aa		12.79	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	TMEM260	Q9NX78	707 aa		12.79	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	NDUFA10	O95299	355 aa		12.79	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	R3HDM1	Q15032	1099 aa	Known RBP	12.79	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	SBK1	Q52WX2	424 aa		12.79	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CYP26C1	Q6V0L0	522 aa		12.79	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	PODN	Q7Z5L7	613 aa		12.79	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	KIAA1328	Q86T90	577 aa		12.79	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	ZFPM1	Q8IX07	1006 aa		12.79	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CAGE1	Q8TC20	777 aa		12.79	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CTAGE1	Q96RT6	745 aa		12.79	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	MYO1B	O43795	1136 aa		12.78	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	ENPP1	P22413	925 aa		12.78	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CRK	P46108	304 aa		12.78	□□□□□ -0.36
CDK5RAP3-231	ENST00000584063	CLK1	P49759	484 aa	Known RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms