RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 SPECC1Q5M775 1068 aa18.83■□□□□ 0.6
CDK5RAP3-230ENST00000584042 HAUS3Q68CZ6 603 aa18.83■□□□□ 0.6
CDK5RAP3-230ENST00000584042 SEPT14Q6ZU15 432 aa18.83■□□□□ 0.6
CDK5RAP3-230ENST00000584042 SCFD2Q8WU76 684 aa18.83■□□□□ 0.6
CDK5RAP3-230ENST00000584042 EPSTI1Q96J88 318 aa18.83■□□□□ 0.6
CDK5RAP3-230ENST00000584042 SDF4Q9BRK5 362 aa18.83■□□□□ 0.6
CDK5RAP3-230ENST00000584042 TCEAL9Q9UHQ7 104 aa18.83■□□□□ 0.6
CDK5RAP3-230ENST00000584042 KDM3AQ9Y4C1 1321 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 ECM2O94769 699 aaPredicted RBP18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 SNAI1O95863 264 aaPredicted RBP18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 CYP2B6P20813 491 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 UBA1P22314 1058 aaKnown RBP18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 HOXD10P28358 340 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 UBA7P41226 1012 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 NDUFA8P51970 172 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 PRKCZQ05513 592 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 ARHGEF6Q15052 776 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 USP49Q70CQ1 688 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 OTOP1Q7RTM1 612 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 GIMAP8Q8ND71 665 aaPredicted RBP18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 ENGASEQ8NFI3 743 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 ERMNQ8TAM6 284 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 CD99L2Q8TCZ2 262 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 NEK9Q8TD19 979 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 ABHD16BQ9H3Z7 469 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 DDX19AQ9NUU7 478 aaKnown RBP18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 PKD2L1Q9P0L9 805 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 LOXHD1Q8IVV2 1947 aa18.82■□□□□ 0.6
CDK5RAP3-230ENST00000584042 RBM47A0AV96 593 aaKnown RBP18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 PP2D1A8MPX8 630 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 TRAK2O60296 914 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 ATP9AO75110 1047 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 SYKP43405 635 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 FLT3LGP49771 235 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 CAP1Q01518 475 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 NEDD9Q14511 834 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 TTLL4Q14679 1199 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 TPRNQ4KMQ1 711 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 KRT79Q5XKE5 535 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 NCAPH2Q6IBW4 605 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 ZNF746Q6NUN9 644 aaPredicted RBP18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 EEPD1Q7L9B9 569 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 CABP7Q86V35 215 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 TRMT44Q8IYL2 757 aaKnown RBP18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 FMR1NBQ8N0W7 255 aaPredicted RBP18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 DNAJC5GQ8N7S2 189 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 RDM1Q8NG50 284 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 SNX29Q8TEQ0 813 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 UIMC1Q96RL1 719 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 UNC45AQ9H3U1 944 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 JPH1Q9HDC5 661 aaPredicted RBP18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 WBP1LQ9NX94 342 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 SRRDQ9UH36 339 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 NRBP1Q9UHY1 535 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 KCNH3Q9ULD8 1083 aa18.81■□□□□ 0.6
CDK5RAP3-230ENST00000584042 NR1I2O75469 434 aa18.8■□□□□ 0.6
CDK5RAP3-230ENST00000584042 SFNP31947 248 aa18.8■□□□□ 0.6
CDK5RAP3-230ENST00000584042 JAK3P52333 1124 aa18.8■□□□□ 0.6
CDK5RAP3-230ENST00000584042 SNW1Q13573 536 aaKnown RBP18.8■□□□□ 0.6
CDK5RAP3-230ENST00000584042 HYIQ5T013 277 aa18.8■□□□□ 0.6
CDK5RAP3-230ENST00000584042 CCDC62Q6P9F0 684 aa18.8■□□□□ 0.6
CDK5RAP3-230ENST00000584042 SMAP1Q8IYB5 467 aaPredicted RBP18.8■□□□□ 0.6
CDK5RAP3-230ENST00000584042 ZNF296Q8WUU4 475 aaPredicted RBP18.8■□□□□ 0.6
CDK5RAP3-230ENST00000584042 SYAP1Q96A49 352 aaPredicted RBP18.8■□□□□ 0.6
CDK5RAP3-230ENST00000584042 MMTAG2Q9BU76 263 aaKnown RBP18.8■□□□□ 0.6
CDK5RAP3-230ENST00000584042 DISC1Q9NRI5 854 aa18.8■□□□□ 0.6
CDK5RAP3-230ENST00000584042 FLRT1Q9NZU1 646 aa18.8■□□□□ 0.6
CDK5RAP3-230ENST00000584042 CCDC39Q9UFE4 941 aa18.8■□□□□ 0.6
CDK5RAP3-230ENST00000584042 USP25Q9UHP3 1055 aa18.8■□□□□ 0.6
CDK5RAP3-230ENST00000584042 GABRQQ9UN88 632 aa18.8■□□□□ 0.6
CDK5RAP3-230ENST00000584042 WDR81Q562E7 1941 aa18.79■□□□□ 0.6
CDK5RAP3-230ENST00000584042 WDR64B1ANS9 1081 aa18.79■□□□□ 0.6
CDK5RAP3-230ENST00000584042 DDX39AO00148 427 aaKnown RBP18.79■□□□□ 0.6
CDK5RAP3-230ENST00000584042 CHMP2AO43633 222 aa18.79■□□□□ 0.6
CDK5RAP3-230ENST00000584042 KINO60870 393 aaKnown RBP18.79■□□□□ 0.6
CDK5RAP3-230ENST00000584042 ARIH2O95376 493 aa18.79■□□□□ 0.6
CDK5RAP3-230ENST00000584042 PRMT2P55345 433 aa18.79■□□□□ 0.6
CDK5RAP3-230ENST00000584042 CCL14Q16627 93 aa18.79■□□□□ 0.6
CDK5RAP3-230ENST00000584042 TAPT1Q6NXT6 567 aa18.79■□□□□ 0.6
CDK5RAP3-230ENST00000584042 CALML4Q96GE6 196 aa18.79■□□□□ 0.6
CDK5RAP3-230ENST00000584042 TIGD1Q96MW7 591 aa18.79■□□□□ 0.6
CDK5RAP3-230ENST00000584042 DACT1Q9NYF0 836 aa18.79■□□□□ 0.6
CDK5RAP3-230ENST00000584042 SLC9A2Q9UBY0 812 aa18.79■□□□□ 0.6
CDK5RAP3-230ENST00000584042 DDX41Q9UJV9 622 aaKnown RBP18.79■□□□□ 0.6
CDK5RAP3-230ENST00000584042 A0A087X0B3 334 aa18.78■□□□□ 0.6
CDK5RAP3-230ENST00000584042 EML1O00423 815 aa18.78■□□□□ 0.6
CDK5RAP3-230ENST00000584042 FARP2O94887 1054 aaPredicted RBP18.78■□□□□ 0.6
CDK5RAP3-230ENST00000584042 MUTP22033 750 aa18.78■□□□□ 0.6
CDK5RAP3-230ENST00000584042 CDC25AP30304 524 aa18.78■□□□□ 0.6
CDK5RAP3-230ENST00000584042 ACVR2BQ13705 512 aa18.78■□□□□ 0.6
CDK5RAP3-230ENST00000584042 KARSQ15046 597 aaKnown RBP18.78■□□□□ 0.6
CDK5RAP3-230ENST00000584042 EPHA7Q15375 998 aa18.78■□□□□ 0.6
CDK5RAP3-230ENST00000584042 E2F4Q16254 413 aa18.78■□□□□ 0.6
CDK5RAP3-230ENST00000584042 TMEM119Q4V9L6 283 aa18.78■□□□□ 0.6
CDK5RAP3-230ENST00000584042 METTL7BQ6UX53 244 aa18.78■□□□□ 0.6
CDK5RAP3-230ENST00000584042 MIER3Q7Z3K6 550 aa18.78■□□□□ 0.6
CDK5RAP3-230ENST00000584042 RASSF8Q8NHQ8 419 aa18.78■□□□□ 0.6
CDK5RAP3-230ENST00000584042 POLR3CQ9BUI4 534 aaPredicted RBP18.78■□□□□ 0.6
CDK5RAP3-230ENST00000584042 NT5C3AQ9H0P0 336 aa18.78■□□□□ 0.6
CDK5RAP3-230ENST00000584042 TUFT1Q9NNX1 390 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms