RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 PGBD1Q96JS3 809 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 MTMR9Q96QG7 549 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 TEKT3Q9BXF9 490 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 UNC93B1Q9H1C4 597 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 JPH1Q9HDC5 661 aaPredicted RBP10.53□□□□□ -0.72
UBBP4-201ENST00000583708 XPNPEP3Q9NQH7 507 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 PDGFCQ9NRA1 345 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 SLC9A2Q9UBY0 812 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 PCDHA12Q9UN75 941 aa10.53□□□□□ -0.72
UBBP4-201ENST00000583708 DNM1LO00429 736 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 NOP56O00567 594 aaKnown RBP10.52□□□□□ -0.73
UBBP4-201ENST00000583708 DHX15O43143 795 aaKnown RBP10.52□□□□□ -0.73
UBBP4-201ENST00000583708 DYNC1LI2O43237 492 aaPredicted RBP10.52□□□□□ -0.73
UBBP4-201ENST00000583708 GAS7O60861 476 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 PSMD10O75832 226 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 ATG7O95352 703 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 TDP2O95551 362 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 YEATS4O95619 227 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 GGPS1O95749 300 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 ARP10275 920 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 UBA1P22314 1058 aaKnown RBP10.52□□□□□ -0.73
UBBP4-201ENST00000583708 FXR2P51116 673 aaKnown RBP eCLIP10.52□□□□□ -0.73
UBBP4-201ENST00000583708 JAK3P52333 1124 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 ARHGAP1Q07960 439 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 TRIM32Q13049 653 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 SEMA3FQ13275 785 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 PPP2R5CQ13362 524 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 FSCN1Q16658 493 aaKnown RBP10.52□□□□□ -0.73
UBBP4-201ENST00000583708 TMEM266Q2M3C6 531 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 LRCH2Q5VUJ6 765 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 TLK2Q86UE8 772 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 SPRYD3Q8NCJ5 442 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 OR6J1Q8NGC5 347 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 CYP2W1Q8TAV3 490 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 NEK9Q8TD19 979 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 FERMT2Q96AC1 680 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 AK8Q96MA6 479 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 SPATA33Q96N06 139 aa10.52□□□□□ -0.73
UBBP4-201ENST00000583708 SCAND2PQ9GZW5 306 aaPredicted RBP10.52□□□□□ -0.73
UBBP4-201ENST00000583708 WDR64B1ANS9 1081 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 KBTBD13C9JR72 458 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 DTNBO60941 627 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 ADAMTS4O75173 837 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 FARP2O94887 1054 aaPredicted RBP10.51□□□□□ -0.73
UBBP4-201ENST00000583708 TFRCP02786 760 aaKnown RBP10.51□□□□□ -0.73
UBBP4-201ENST00000583708 PSAPP07602 524 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 OR52Z1P0C646 297 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 MCM7P33993 719 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 NASPP49321 788 aaPredicted RBP10.51□□□□□ -0.73
UBBP4-201ENST00000583708 ATP2C1P98194 919 aaPredicted RBP10.51□□□□□ -0.73
UBBP4-201ENST00000583708 PTGDRQ13258 359 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 SLC39A14Q15043 492 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 MTFR1Q15390 333 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 LY6KQ17RY6 165 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 CSPP1Q1MSJ5 1256 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 GNASQ5JWF2 1037 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 ANO1Q5XXA6 986 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 MIS18BP1Q6P0N0 1132 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 B3GNT9Q6UX72 402 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 DTHD1Q6ZMT9 781 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 CYFIP1Q7L576 1253 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 PLPPR4Q7Z2D5 763 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 FERMT3Q86UX7 667 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 C4orf32Q8N8J7 132 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 U2AF1L4Q8WU68 220 aaKnown RBP10.51□□□□□ -0.73
UBBP4-201ENST00000583708 DEFB118Q96PH6 123 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 KATNAL1Q9BW62 490 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 SMARCAD1Q9H4L7 1026 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 PCDHA10Q9Y5I2 948 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 ELP1O95163 1332 aa10.51□□□□□ -0.73
UBBP4-201ENST00000583708 LCTP09848 1927 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 ATP9AO75110 1047 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 PPP6R2O75170 966 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 LGR5O75473 907 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 ARIH2O95376 493 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 C6orf222P0C671 652 aaPredicted RBP10.5□□□□□ -0.73
UBBP4-201ENST00000583708 XRCC6P12956 609 aaKnown RBP eCLIP10.5□□□□□ -0.73
UBBP4-201ENST00000583708 KRT85P78386 507 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 SP2Q02086 613 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 PTPN11Q06124 597 aaPredicted RBP10.5□□□□□ -0.73
UBBP4-201ENST00000583708 ITGB3BPQ13352 177 aaPredicted RBP10.5□□□□□ -0.73
UBBP4-201ENST00000583708 LRRC41Q15345 812 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 EPHA7Q15375 998 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 ZNF174Q15697 407 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 COL13A1Q5TAT6 717 aaPredicted RBP10.5□□□□□ -0.73
UBBP4-201ENST00000583708 FAM160B1Q5W0V3 765 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 CCSAPQ6IQ19 270 aaPredicted RBP10.5□□□□□ -0.73
UBBP4-201ENST00000583708 EXOC8Q8IYI6 725 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 TNS4Q8IZW8 715 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 ERMNQ8TAM6 284 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 KCNG4Q8TDN1 519 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 AFAP1L1Q8TED9 768 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 HAS1Q92839 578 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 ABHD8Q96I13 439 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 GPR20Q99678 358 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 MTG1Q9BT17 334 aaPredicted RBP10.5□□□□□ -0.73
UBBP4-201ENST00000583708 AZI2Q9H6S1 392 aa10.5□□□□□ -0.73
UBBP4-201ENST00000583708 TTC12Q9H892 705 aaPredicted RBP10.5□□□□□ -0.73
UBBP4-201ENST00000583708 ZNF215Q9UL58 517 aaPredicted RBP10.5□□□□□ -0.73
UBBP4-201ENST00000583708 PPME1Q9Y570 386 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms