RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 AFG1LQ8WV93 481 aa28.49■■■□□ 2.15
TSEN54-209ENST00000583454 MTIF3Q9H2K0 278 aaKnown RBP28.49■■■□□ 2.15
TSEN54-209ENST00000583454 SMCO2A6NFE2 343 aa28.48■■■□□ 2.15
TSEN54-209ENST00000583454 LARGE1O95461 756 aa28.48■■■□□ 2.15
TSEN54-209ENST00000583454 MMP3P08254 477 aa28.48■■■□□ 2.15
TSEN54-209ENST00000583454 PTPN11Q06124 597 aaPredicted RBP28.48■■■□□ 2.15
TSEN54-209ENST00000583454 RABEP1Q15276 862 aa28.48■■■□□ 2.15
TSEN54-209ENST00000583454 RAB30Q15771 203 aa28.48■■■□□ 2.15
TSEN54-209ENST00000583454 FAM47CQ5HY64 1035 aa28.48■■■□□ 2.15
TSEN54-209ENST00000583454 SEPT14Q6ZU15 432 aa28.48■■■□□ 2.15
TSEN54-209ENST00000583454 IL31RAQ8NI17 732 aa28.48■■■□□ 2.15
TSEN54-209ENST00000583454 CTAGE1Q96RT6 745 aa28.48■■■□□ 2.15
TSEN54-209ENST00000583454 GLT8D2Q9H1C3 349 aa28.48■■■□□ 2.15
TSEN54-209ENST00000583454 PRDM12Q9H4Q4 367 aa28.48■■■□□ 2.15
TSEN54-209ENST00000583454 ESYT2A0FGR8 921 aa28.47■■■□□ 2.15
TSEN54-209ENST00000583454 CDKL5O76039 1030 aa28.47■■■□□ 2.15
TSEN54-209ENST00000583454 ADCY7P51828 1080 aa28.47■■■□□ 2.15
TSEN54-209ENST00000583454 UBE2SQ16763 222 aa28.47■■■□□ 2.15
TSEN54-209ENST00000583454 KAT2BQ92831 832 aa28.47■■■□□ 2.15
TSEN54-209ENST00000583454 GTF3C6Q969F1 213 aa28.47■■■□□ 2.15
TSEN54-209ENST00000583454 ZMYND12Q9H0C1 365 aa28.47■■■□□ 2.15
TSEN54-209ENST00000583454 NKX2-4Q9H2Z4 354 aa28.47■■■□□ 2.15
TSEN54-209ENST00000583454 LIMCH1Q9UPQ0 1083 aa28.47■■■□□ 2.15
TSEN54-209ENST00000583454 GH1P01241 217 aa28.46■■■□□ 2.15
TSEN54-209ENST00000583454 MYCLP12524 364 aaPredicted RBP28.46■■■□□ 2.15
TSEN54-209ENST00000583454 ADGRE1Q14246 886 aa28.46■■■□□ 2.15
TSEN54-209ENST00000583454 NECAB1Q8N987 351 aa28.46■■■□□ 2.15
TSEN54-209ENST00000583454 IL27Q8NEV9 243 aa28.46■■■□□ 2.15
TSEN54-209ENST00000583454 CCDC12Q8WUD4 166 aaPredicted RBP28.46■■■□□ 2.15
TSEN54-209ENST00000583454 MSRAQ9UJ68 235 aa28.46■■■□□ 2.15
TSEN54-209ENST00000583454 DDX41Q9UJV9 622 aaKnown RBP28.46■■■□□ 2.15
TSEN54-209ENST00000583454 PITPNM1O00562 1244 aa28.45■■■□□ 2.14
TSEN54-209ENST00000583454 RGS20O76081 388 aa28.45■■■□□ 2.14
TSEN54-209ENST00000583454 DEXIO95424 95 aa28.45■■■□□ 2.14
TSEN54-209ENST00000583454 CTDNEP1O95476 244 aa28.45■■■□□ 2.14
TSEN54-209ENST00000583454 PFKMP08237 780 aa28.45■■■□□ 2.14
TSEN54-209ENST00000583454 CCND2P30279 289 aa28.45■■■□□ 2.14
TSEN54-209ENST00000583454 RABGGTBP53611 331 aa28.45■■■□□ 2.14
TSEN54-209ENST00000583454 XRRA1Q6P2D8 792 aa28.45■■■□□ 2.14
TSEN54-209ENST00000583454 SH3GLB2Q9NR46 395 aa28.45■■■□□ 2.14
TSEN54-209ENST00000583454 SLC4A7Q9Y6M7 1214 aa28.45■■■□□ 2.14
TSEN54-209ENST00000583454 XIRP2A4UGR9 3374 aa28.45■■■□□ 2.14
TSEN54-209ENST00000583454 CLK2P49760 499 aaKnown RBP28.44■■■□□ 2.14
TSEN54-209ENST00000583454 MRPS9P82933 396 aaKnown RBP28.44■■■□□ 2.14
TSEN54-209ENST00000583454 DEFB128Q7Z7B8 93 aa28.44■■■□□ 2.14
TSEN54-209ENST00000583454 EMID1Q96A84 441 aaPredicted RBP28.44■■■□□ 2.14
TSEN54-209ENST00000583454 PCDHA6Q9UN73 950 aa28.44■■■□□ 2.14
TSEN54-209ENST00000583454 PCDHA8Q9Y5H6 950 aa28.44■■■□□ 2.14
TSEN54-209ENST00000583454 STK36Q9NRP7 1315 aa28.43■■■□□ 2.14
TSEN54-209ENST00000583454 SPDYE3A6NKU9 549 aa28.43■■■□□ 2.14
TSEN54-209ENST00000583454 FOSP01100 380 aaPredicted RBP28.43■■■□□ 2.14
TSEN54-209ENST00000583454 IQCF3P0C7M6 154 aa28.43■■■□□ 2.14
TSEN54-209ENST00000583454 MYOGP15173 224 aa28.43■■■□□ 2.14
TSEN54-209ENST00000583454 PCNX4Q63HM2 1172 aa28.43■■■□□ 2.14
TSEN54-209ENST00000583454 SESTD1Q86VW0 696 aa28.43■■■□□ 2.14
TSEN54-209ENST00000583454 C6orf50Q9HD87 102 aa28.43■■■□□ 2.14
TSEN54-209ENST00000583454 STAM2O75886 525 aa28.42■■■□□ 2.14
TSEN54-209ENST00000583454 RFC2P35250 354 aa28.42■■■□□ 2.14
TSEN54-209ENST00000583454 CCDC148Q8NFR7 591 aa28.42■■■□□ 2.14
TSEN54-209ENST00000583454 VPS54Q9P1Q0 977 aa28.42■■■□□ 2.14
TSEN54-209ENST00000583454 GNA11P29992 359 aa28.41■■■□□ 2.14
TSEN54-209ENST00000583454 GDF6Q6KF10 455 aaPredicted RBP28.41■■■□□ 2.14
TSEN54-209ENST00000583454 FAM177A1Q8N128 213 aaPredicted RBP28.41■■■□□ 2.14
TSEN54-209ENST00000583454 ZSCAN31Q96LW9 406 aaPredicted RBP28.41■■■□□ 2.14
TSEN54-209ENST00000583454 INPP4AQ96PE3 977 aaPredicted RBP28.41■■■□□ 2.14
TSEN54-209ENST00000583454 GAS2L1Q99501 681 aaPredicted RBP28.41■■■□□ 2.14
TSEN54-209ENST00000583454 SLC28A3Q9HAS3 691 aa28.41■■■□□ 2.14
TSEN54-209ENST00000583454 PRDM6Q9NQX0 595 aa28.41■■■□□ 2.14
TSEN54-209ENST00000583454 PCDHA11Q9Y5I1 949 aa28.41■■■□□ 2.14
TSEN54-209ENST00000583454 ZBBXA8MT70 800 aa28.4■■■□□ 2.14
TSEN54-209ENST00000583454 ADAMTS3O15072 1205 aa28.4■■■□□ 2.14
TSEN54-209ENST00000583454 ATP2A2P16615 1042 aaKnown RBP28.4■■■□□ 2.14
TSEN54-209ENST00000583454 ST3GAL1Q11201 340 aa28.4■■■□□ 2.14
TSEN54-209ENST00000583454 AP3B2Q13367 1082 aa28.4■■■□□ 2.14
TSEN54-209ENST00000583454 GPNMBQ14956 572 aa28.4■■■□□ 2.14
TSEN54-209ENST00000583454 DHX38Q92620 1227 aaKnown RBP28.4■■■□□ 2.14
TSEN54-209ENST00000583454 ZFP91Q96JP5 570 aaPredicted RBP28.4■■■□□ 2.14
TSEN54-209ENST00000583454 DOCK5Q9H7D0 1870 aa28.4■■■□□ 2.14
TSEN54-209ENST00000583454 BDP1A6H8Y1 2624 aa28.39■■■□□ 2.14
TSEN54-209ENST00000583454 TGFB3P10600 412 aa28.39■■■□□ 2.14
TSEN54-209ENST00000583454 HOXD8P13378 290 aaPredicted RBP28.39■■■□□ 2.14
TSEN54-209ENST00000583454 PTGISQ16647 500 aa28.39■■■□□ 2.14
TSEN54-209ENST00000583454 MCTP2Q6DN12 878 aa28.39■■■□□ 2.14
TSEN54-209ENST00000583454 KCNV1Q6PIU1 500 aa28.39■■■□□ 2.14
TSEN54-209ENST00000583454 NSUN7Q8NE18 718 aaKnown RBP28.39■■■□□ 2.14
TSEN54-209ENST00000583454 AIFM3Q96NN9 605 aa28.39■■■□□ 2.14
TSEN54-209ENST00000583454 EHMT1Q9H9B1 1298 aa28.39■■■□□ 2.14
TSEN54-209ENST00000583454 TMEM260Q9NX78 707 aa28.39■■■□□ 2.14
TSEN54-209ENST00000583454 MRVI1Q9Y6F6 885 aa28.39■■■□□ 2.14
TSEN54-209ENST00000583454 FDPSP14324 419 aaKnown RBP28.38■■■□□ 2.13
TSEN54-209ENST00000583454 ICAM3P32942 547 aa28.38■■■□□ 2.13
TSEN54-209ENST00000583454 CHMP4BP1P59074 171 aa28.38■■■□□ 2.13
TSEN54-209ENST00000583454 BFSP2Q13515 415 aa28.38■■■□□ 2.13
TSEN54-209ENST00000583454 DGKDQ16760 1214 aa28.38■■■□□ 2.13
TSEN54-209ENST00000583454 REXO1Q8N1G1 1221 aaKnown RBP28.38■■■□□ 2.13
TSEN54-209ENST00000583454 PPTC7Q8NI37 304 aa28.38■■■□□ 2.13
TSEN54-209ENST00000583454 BICD2Q8TD16 824 aa28.38■■■□□ 2.13
TSEN54-209ENST00000583454 SH2B1Q9NRF2 756 aaPredicted RBP28.38■■■□□ 2.13
TSEN54-209ENST00000583454 ORC3Q9UBD5 711 aaPredicted RBP28.38■■■□□ 2.13
TSEN54-209ENST00000583454 NCOR1O75376 2440 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms