RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 UMODL1Q5DID0 1318 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 TRIP12Q14669 1992 aaPredicted RBP9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 IGKV6D-41A0A0C4DH26 115 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 CLTBP09497 229 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 NPR3P17342 541 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 MPSTP25325 297 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 BRD2P25440 801 aaKnown RBP9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 ADGRE1Q14246 886 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 C20orf194Q5TEA3 1177 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 RASIP1Q5U651 963 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 ZNF787Q6DD87 383 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 FTSJ3Q8IY81 847 aaKnown RBP9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 MB21D1Q8N884 522 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 ARRDC4Q8NCT1 418 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 IFT43Q96FT9 208 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 MROH8Q9H579 483 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 ZBTB40Q9NUA8 1239 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 PAG1Q9NWQ8 432 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 HOXC10Q9NYD6 342 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 PRRC2BQ5JSZ5 2229 aaKnown RBP9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 BRWD1Q9NSI6 2320 aa9.47□□□□□ -0.89
PPP4R1-225ENST00000583438 SCN10AQ9Y5Y9 1956 aa9.46□□□□□ -0.89
PPP4R1-225ENST00000583438 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 GSG1L2A8MUP6 293 aa9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 FOXP2O15409 715 aa9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 NDUFB10O96000 172 aa9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 FCER1AP12319 257 aa9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 CDK7P50613 346 aa9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 ACLYP53396 1101 aa9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 HNRNPUQ00839 825 aaKnown RBP eCLIP9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 UBAP2LQ14157 1087 aaKnown RBP9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 ANKRD33Q7Z3H0 272 aa9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 CERS3Q8IU89 383 aa9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 GLYCTKQ8IVS8 523 aa9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 RNPC3Q96LT9 517 aaKnown RBP9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 HAUS7Q99871 368 aa9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 SWAP70Q9UH65 585 aa9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 DMGDHQ9UI17 866 aaKnown RBP9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 GRIN2DO15399 1336 aa9.46□□□□□ -0.9
PPP4R1-225ENST00000583438 TGFBR3LH3BV60 316 aa9.45□□□□□ -0.9
PPP4R1-225ENST00000583438 M0R2C6 588 aa9.45□□□□□ -0.9
PPP4R1-225ENST00000583438 ACRP10323 421 aa9.45□□□□□ -0.9
PPP4R1-225ENST00000583438 RARBP10826 455 aa9.45□□□□□ -0.9
PPP4R1-225ENST00000583438 FOSL2P15408 326 aa9.45□□□□□ -0.9
PPP4R1-225ENST00000583438 ATP5JP18859 108 aa9.45□□□□□ -0.9
PPP4R1-225ENST00000583438 STAT3P40763 770 aa9.45□□□□□ -0.9
PPP4R1-225ENST00000583438 CNTN2Q02246 1040 aa9.45□□□□□ -0.9
PPP4R1-225ENST00000583438 KCNA10Q16322 511 aa9.45□□□□□ -0.9
PPP4R1-225ENST00000583438 TMEM240Q5SV17 173 aa9.45□□□□□ -0.9
PPP4R1-225ENST00000583438 NLRP8Q86W28 1048 aa9.45□□□□□ -0.9
PPP4R1-225ENST00000583438 TRIM22Q8IYM9 498 aa9.45□□□□□ -0.9
PPP4R1-225ENST00000583438 OSBP2Q969R2 916 aa9.45□□□□□ -0.9
PPP4R1-225ENST00000583438 NUCKS1Q9H1E3 243 aaKnown RBP9.45□□□□□ -0.9
PPP4R1-225ENST00000583438 NEUROD4Q9HD90 331 aa9.45□□□□□ -0.9
PPP4R1-225ENST00000583438 PRDM1O75626 825 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 AKR1A1P14550 325 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 CSF2RAP15509 400 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 BEX3Q00994 111 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 FPGSQ05932 587 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 TTF1Q15361 905 aaPredicted RBP9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 HIF1AQ16665 826 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 EFHC2Q5JST6 749 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 SNRNP48Q6IEG0 339 aaKnown RBP9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 MAMDC4Q6UXC1 1216 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 SND1Q7KZF4 910 aaKnown RBP eCLIP9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 TREML1Q86YW5 311 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 ERC1Q8IUD2 1116 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 FAM126BQ8IXS8 530 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 LRRC47Q8N1G4 583 aaKnown RBP9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 PPP1R13LQ8WUF5 828 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 CHMP4CQ96CF2 233 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 ZNF837Q96EG3 531 aaPredicted RBP9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 KIF1BPQ96EK5 621 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 STRBPQ96SI9 672 aaKnown RBP9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 PBX4Q9BYU1 374 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 UPF3AQ9H1J1 476 aaKnown RBP9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 ATP8A2Q9NTI2 1148 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 PRKAG2Q9UGJ0 569 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 YBX2Q9Y2T7 364 aaKnown RBP9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 SLC4A4Q9Y6R1 1079 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 ZNF536O15090 1300 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 MYH6P13533 1939 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 KIAA1217Q5T5P2 1943 aa9.44□□□□□ -0.9
PPP4R1-225ENST00000583438 LAMA4Q16363 1823 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 MICAL2O94851 1124 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 FAM13AO94988 1023 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 ARHGEF15O94989 841 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 SLC25A27O95847 323 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 CD4P01730 458 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 RAG1P15918 1043 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 CST5P28325 142 aaPredicted RBP9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 CYP2C18P33260 490 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 SNAP25P60880 206 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 ARHGAP4P98171 946 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 LBRQ14739 615 aaKnown RBP9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 UBE3CQ15386 1083 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 TMED8Q6PL24 325 aaPredicted RBP9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 SPRED2Q7Z698 418 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms