RNA–Protein interactions for RNA: ENST00000583213.1

TNFAIP1-206, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-206ENST00000583213 TUT1Q9H6E5 874 aaKnown RBP18.59■□□□□ 0.57
TNFAIP1-206ENST00000583213 BCAS3Q9H6U6 928 aa18.59■□□□□ 0.57
TNFAIP1-206ENST00000583213 MLXIPQ9HAP2 919 aa18.59■□□□□ 0.57
TNFAIP1-206ENST00000583213 LMCD1Q9NZU5 365 aa18.59■□□□□ 0.57
TNFAIP1-206ENST00000583213 RBM8AQ9Y5S9 174 aaKnown RBP18.59■□□□□ 0.57
TNFAIP1-206ENST00000583213 MEIS2O14770 477 aa18.58■□□□□ 0.56
TNFAIP1-206ENST00000583213 FIBPO43427 364 aa18.58■□□□□ 0.56
TNFAIP1-206ENST00000583213 ERVK-21P61565 698 aa18.58■□□□□ 0.56
TNFAIP1-206ENST00000583213 IKBKEQ14164 716 aa18.58■□□□□ 0.56
TNFAIP1-206ENST00000583213 PCNX4Q63HM2 1172 aa18.58■□□□□ 0.56
TNFAIP1-206ENST00000583213 TMCO2Q7Z6W1 182 aaPredicted RBP18.58■□□□□ 0.56
TNFAIP1-206ENST00000583213 GPR20Q99678 358 aa18.58■□□□□ 0.56
TNFAIP1-206ENST00000583213 SENP7Q9BQF6 1050 aa18.58■□□□□ 0.56
TNFAIP1-206ENST00000583213 LZTS2Q9BRK4 669 aa18.58■□□□□ 0.56
TNFAIP1-206ENST00000583213 USP26Q9BXU7 913 aa18.58■□□□□ 0.56
TNFAIP1-206ENST00000583213 COG5Q9UP83 839 aa18.58■□□□□ 0.56
TNFAIP1-206ENST00000583213 DOCK5Q9H7D0 1870 aa18.58■□□□□ 0.56
TNFAIP1-206ENST00000583213 C17orf102A2RUQ5 167 aa18.57■□□□□ 0.56
TNFAIP1-206ENST00000583213 SMIM10L2AP0DMW4 78 aa18.57■□□□□ 0.56
TNFAIP1-206ENST00000583213 SMIM10L2BP0DMW5 78 aa18.57■□□□□ 0.56
TNFAIP1-206ENST00000583213 KIF5BP33176 963 aa18.57■□□□□ 0.56
TNFAIP1-206ENST00000583213 ADAM17P78536 824 aa18.57■□□□□ 0.56
TNFAIP1-206ENST00000583213 TFF2Q03403 129 aa18.57■□□□□ 0.56
TNFAIP1-206ENST00000583213 PLEKHG4Q58EX7 1191 aa18.57■□□□□ 0.56
TNFAIP1-206ENST00000583213 KRT40Q6A162 431 aa18.57■□□□□ 0.56
TNFAIP1-206ENST00000583213 MICALL1Q8N3F8 863 aa18.57■□□□□ 0.56
TNFAIP1-206ENST00000583213 CTCFLQ8NI51 663 aaPredicted RBP18.57■□□□□ 0.56
TNFAIP1-206ENST00000583213 ZFP91Q96JP5 570 aaPredicted RBP18.57■□□□□ 0.56
TNFAIP1-206ENST00000583213 LSG1Q9H089 658 aaKnown RBP18.57■□□□□ 0.56
TNFAIP1-206ENST00000583213 LINC01553A4QN01 128 aa18.56■□□□□ 0.56
TNFAIP1-206ENST00000583213 RSPH10B2B2RC85 870 aa18.56■□□□□ 0.56
TNFAIP1-206ENST00000583213 SH2B2O14492 632 aaPredicted RBP18.56■□□□□ 0.56
TNFAIP1-206ENST00000583213 SORBS3O60504 671 aa18.56■□□□□ 0.56
TNFAIP1-206ENST00000583213 RSPH10BP0C881 870 aa18.56■□□□□ 0.56
TNFAIP1-206ENST00000583213 LIFRP42702 1097 aa18.56■□□□□ 0.56
TNFAIP1-206ENST00000583213 HTRA4P83105 476 aaPredicted RBP18.56■□□□□ 0.56
TNFAIP1-206ENST00000583213 TMTC2Q8N394 836 aa18.56■□□□□ 0.56
TNFAIP1-206ENST00000583213 SP7Q8TDD2 431 aaPredicted RBP18.56■□□□□ 0.56
TNFAIP1-206ENST00000583213 ATP6V0A1Q93050 837 aa18.56■□□□□ 0.56
TNFAIP1-206ENST00000583213 RRP36Q96EU6 259 aaKnown RBP18.56■□□□□ 0.56
TNFAIP1-206ENST00000583213 TMEM87BQ96K49 555 aa18.56■□□□□ 0.56
TNFAIP1-206ENST00000583213 RNPEPQ9H4A4 650 aa18.56■□□□□ 0.56
TNFAIP1-206ENST00000583213 TREHO43280 583 aa18.55■□□□□ 0.56
TNFAIP1-206ENST00000583213 THPOP40225 353 aa18.55■□□□□ 0.56
TNFAIP1-206ENST00000583213 GNAQP50148 359 aa18.55■□□□□ 0.56
TNFAIP1-206ENST00000583213 COL9A3Q14050 684 aaPredicted RBP18.55■□□□□ 0.56
TNFAIP1-206ENST00000583213 USP17L6PQ6QN14 398 aa18.55■□□□□ 0.56
TNFAIP1-206ENST00000583213 CYFIP1Q7L576 1253 aa18.55■□□□□ 0.56
TNFAIP1-206ENST00000583213 SRBD1Q8N5C6 995 aaKnown RBP18.55■□□□□ 0.56
TNFAIP1-206ENST00000583213 DBF4BQ8NFT6 615 aa18.55■□□□□ 0.56
TNFAIP1-206ENST00000583213 TGS1Q96RS0 853 aaKnown RBP18.55■□□□□ 0.56
TNFAIP1-206ENST00000583213 MYL10Q9BUA6 226 aa18.55■□□□□ 0.56
TNFAIP1-206ENST00000583213 TCF20Q9UGU0 1960 aaKnown RBP18.55■□□□□ 0.56
TNFAIP1-206ENST00000583213 NOP56O00567 594 aaKnown RBP18.54■□□□□ 0.56
TNFAIP1-206ENST00000583213 PRC1O43663 620 aa18.54■□□□□ 0.56
TNFAIP1-206ENST00000583213 PLEKHA8P1O95397 391 aa18.54■□□□□ 0.56
TNFAIP1-206ENST00000583213 MCM5P33992 734 aa18.54■□□□□ 0.56
TNFAIP1-206ENST00000583213 FAM26DQ5JW98 314 aa18.54■□□□□ 0.56
TNFAIP1-206ENST00000583213 CASC1Q6TDU7 716 aa18.54■□□□□ 0.56
TNFAIP1-206ENST00000583213 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.54■□□□□ 0.56
TNFAIP1-206ENST00000583213 RPAINQ86UA6 219 aa18.54■□□□□ 0.56
TNFAIP1-206ENST00000583213 IL27Q8NEV9 243 aa18.54■□□□□ 0.56
TNFAIP1-206ENST00000583213 ZBED2Q9BTP6 218 aa18.54■□□□□ 0.56
TNFAIP1-206ENST00000583213 SUGCTQ9HAC7 445 aa18.54■□□□□ 0.56
TNFAIP1-206ENST00000583213 INSL6Q9Y581 213 aa18.54■□□□□ 0.56
TNFAIP1-206ENST00000583213 GNAT1P11488 350 aa18.53■□□□□ 0.56
TNFAIP1-206ENST00000583213 KCNQ1P51787 676 aa18.53■□□□□ 0.56
TNFAIP1-206ENST00000583213 NECTIN1Q15223 517 aa18.53■□□□□ 0.56
TNFAIP1-206ENST00000583213 SGMS1Q86VZ5 419 aa18.53■□□□□ 0.56
TNFAIP1-206ENST00000583213 TRIM50Q86XT4 487 aa18.53■□□□□ 0.56
TNFAIP1-206ENST00000583213 GIMAP8Q8ND71 665 aaPredicted RBP18.53■□□□□ 0.56
TNFAIP1-206ENST00000583213 SMARCC2Q8TAQ2 1214 aa18.53■□□□□ 0.56
TNFAIP1-206ENST00000583213 GDPD5Q8WTR4 605 aa18.53■□□□□ 0.56
TNFAIP1-206ENST00000583213 CUL5Q93034 780 aa18.53■□□□□ 0.56
TNFAIP1-206ENST00000583213 GPRASP2Q96D09 838 aa18.53■□□□□ 0.56
TNFAIP1-206ENST00000583213 RTEL1Q9NZ71 1219 aa18.53■□□□□ 0.56
TNFAIP1-206ENST00000583213 SEC63Q9UGP8 760 aaKnown RBP18.53■□□□□ 0.56
TNFAIP1-206ENST00000583213 ZNF215Q9UL58 517 aaPredicted RBP18.53■□□□□ 0.56
TNFAIP1-206ENST00000583213 TELO2Q9Y4R8 837 aa18.53■□□□□ 0.56
TNFAIP1-206ENST00000583213 SLC27A2O14975 620 aa18.52■□□□□ 0.56
TNFAIP1-206ENST00000583213 AMHP03971 560 aa18.52■□□□□ 0.56
TNFAIP1-206ENST00000583213 CALM1P0DP23 149 aa18.52■□□□□ 0.56
TNFAIP1-206ENST00000583213 CALM2P0DP24 149 aa18.52■□□□□ 0.56
TNFAIP1-206ENST00000583213 CALM3P0DP25 149 aa18.52■□□□□ 0.56
TNFAIP1-206ENST00000583213 KCNA2P16389 499 aa18.52■□□□□ 0.56
TNFAIP1-206ENST00000583213 SKIV2LQ15477 1246 aaKnown RBP18.52■□□□□ 0.56
TNFAIP1-206ENST00000583213 TEX2Q8IWB9 1127 aa18.52■□□□□ 0.56
TNFAIP1-206ENST00000583213 LMBR1Q8WVP7 490 aa18.52■□□□□ 0.56
TNFAIP1-206ENST00000583213 PIBF1Q8WXW3 757 aa18.52■□□□□ 0.56
TNFAIP1-206ENST00000583213 HLA-CQ95604 372 aa18.52■□□□□ 0.56
TNFAIP1-206ENST00000583213 NECAB3Q96P71 396 aaPredicted RBP18.52■□□□□ 0.56
TNFAIP1-206ENST00000583213 ESYT1Q9BSJ8 1104 aa18.52■□□□□ 0.56
TNFAIP1-206ENST00000583213 NRCAMQ92823 1304 aa18.51■□□□□ 0.55
TNFAIP1-206ENST00000583213 RBAK-RBAKDNI3L0D1 243 aa18.51■□□□□ 0.55
TNFAIP1-206ENST00000583213 ITGB5P18084 799 aa18.51■□□□□ 0.55
TNFAIP1-206ENST00000583213 TMTC3Q6ZXV5 915 aa18.51■□□□□ 0.55
TNFAIP1-206ENST00000583213 NLRX1Q86UT6 975 aa18.51■□□□□ 0.55
TNFAIP1-206ENST00000583213 SEPT8Q92599 483 aa18.51■□□□□ 0.55
TNFAIP1-206ENST00000583213 CDHR1Q96JP9 859 aa18.51■□□□□ 0.55
TNFAIP1-206ENST00000583213 OSBPL7Q9BZF2 842 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms