RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 LTBP2Q14767 1821 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 SCN10AQ9Y5Y9 1956 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 ATP9AO75110 1047 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 PPFIA4O75335 1185 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 CTDNEP1O95476 244 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 CD4P01730 458 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 KCNA2P16389 499 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 XBP1P17861 261 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 ITGB8P26012 769 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 BMP8BP34820 402 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 PSEN2P49810 448 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 CEP55Q53EZ4 464 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 NFRKBQ6P4R8 1299 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 CYP2W1Q8TAV3 490 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 KAT2BQ92831 832 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 ALG1Q9BT22 464 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 PPP1R12CQ9BZL4 782 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 PRO3102Q9H379 93 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 ORC3Q9UBD5 711 aaPredicted RBP14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 TBX21Q9UL17 535 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 PCDHA4Q9UN74 947 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 LIMCH1Q9UPQ0 1083 aa14.37□□□□□ -0.11
SMARCE1-218ENST00000582955 DOCK5Q9H7D0 1870 aa14.36□□□□□ -0.11
SMARCE1-218ENST00000582955 MAFGO15525 162 aa14.36□□□□□ -0.11
SMARCE1-218ENST00000582955 F2P00734 622 aa14.36□□□□□ -0.11
SMARCE1-218ENST00000582955 HOXD8P13378 290 aaPredicted RBP14.36□□□□□ -0.11
SMARCE1-218ENST00000582955 PTPN11Q06124 597 aaPredicted RBP14.36□□□□□ -0.11
SMARCE1-218ENST00000582955 MFSD10Q14728 455 aa14.36□□□□□ -0.11
SMARCE1-218ENST00000582955 BLIDQ8IZY5 108 aa14.36□□□□□ -0.11
SMARCE1-218ENST00000582955 WASF1Q92558 559 aa14.36□□□□□ -0.11
SMARCE1-218ENST00000582955 GPR20Q99678 358 aa14.36□□□□□ -0.11
SMARCE1-218ENST00000582955 KCNH7Q9NS40 1196 aa14.36□□□□□ -0.11
SMARCE1-218ENST00000582955 TRMT13Q9NUP7 481 aaKnown RBP14.36□□□□□ -0.11
SMARCE1-218ENST00000582955 KCNJ14Q9UNX9 436 aa14.36□□□□□ -0.11
SMARCE1-218ENST00000582955 NOD1Q9Y239 953 aa14.36□□□□□ -0.11
SMARCE1-218ENST00000582955 TIMP1P01033 207 aa14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 LGALS2P05162 132 aa14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 CYP3A4P08684 503 aa14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 SUPT20HL2P0C7V6 817 aa14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 ARP10275 920 aa14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 RABEP1Q15276 862 aa14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 KIAA0753Q2KHM9 967 aa14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 UTP14CQ5TAP6 766 aaKnown RBP14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 GALNT17Q6IS24 598 aa14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 PLA2G4DQ86XP0 818 aa14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 FAM177A1Q8N128 213 aaPredicted RBP14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 C7orf31Q8N865 590 aa14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 NSUN7Q8NE18 718 aaKnown RBP14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 SDF4Q9BRK5 362 aa14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 HIPK3Q9H422 1215 aa14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 TELO2Q9Y4R8 837 aa14.35□□□□□ -0.11
SMARCE1-218ENST00000582955 A0A1W2PPC1 479 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 FAM86B1E9PN63 330 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 MEIS1O00470 390 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 JAK2O60674 1132 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 FAM86B2P0C5J1 330 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 CYP2C9P11712 490 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 CYP2C18P33260 490 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 FPGSQ05932 587 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 NIPA1Q7RTP0 329 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 CCDC83Q8IWF9 413 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 TDHQ8IZJ6 230 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 DAGLBQ8NCG7 672 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 CRYGNQ8WXF5 182 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 C16orf70Q9BSU1 422 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 PHF20Q9BVI0 1012 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 AGO4Q9HCK5 861 aaKnown RBP14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 JPH1Q9HDC5 661 aaPredicted RBP14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 GJB4Q9NTQ9 266 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 HDAC6Q9UBN7 1215 aa14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 RANBP2P49792 3224 aaKnown RBP14.34□□□□□ -0.11
SMARCE1-218ENST00000582955 H3BRB1 525 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 HAS3O00219 553 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 ST18O60284 1047 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 FDPSP14324 419 aaKnown RBP14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 TCF7P36402 384 aaPredicted RBP14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 FOSBP53539 338 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 SETQ01105 290 aaPredicted RBP14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 ST3GAL1Q11201 340 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 PTGISQ16647 500 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 PRR16Q569H4 304 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 GDF6Q6KF10 455 aaPredicted RBP14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 MFSD5Q6N075 450 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 SESTD1Q86VW0 696 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 TRIM50Q86XT4 487 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 TMEM199Q8N511 208 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 TBCKQ8TEA7 893 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 SEPT1Q8WYJ6 367 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 ZSCAN31Q96LW9 406 aaPredicted RBP14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 UIMC1Q96RL1 719 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 NOC4LQ9BVI4 516 aaKnown RBP14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 TUT1Q9H6E5 874 aaKnown RBP14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 SLC9A2Q9UBY0 812 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 GTF2IRD1Q9UHL9 959 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 ZNF215Q9UL58 517 aaPredicted RBP14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 TRIOBPQ9H2D6 2365 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 NFASCO94856 1347 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 UMODL1Q5DID0 1318 aa14.33□□□□□ -0.12
SMARCE1-218ENST00000582955 IGLV3-22A0A075B6J6 115 aa14.32□□□□□ -0.12
SMARCE1-218ENST00000582955 DDX39AO00148 427 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms