RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 ABHD16BQ9H3Z7 469 aa13.53□□□□□ -0.24
CCDC57-216ENST00000582885 WBP1LQ9NX94 342 aa13.53□□□□□ -0.24
CCDC57-216ENST00000582885 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.53□□□□□ -0.24
CCDC57-216ENST00000582885 DDX49Q9Y6V7 483 aaKnown RBP13.53□□□□□ -0.24
CCDC57-216ENST00000582885 A0A1B0GVL5 298 aa13.52□□□□□ -0.25
CCDC57-216ENST00000582885 TRAK2O60296 914 aa13.52□□□□□ -0.25
CCDC57-216ENST00000582885 ATP9AO75110 1047 aa13.52□□□□□ -0.25
CCDC57-216ENST00000582885 SNAI1O95863 264 aaPredicted RBP13.52□□□□□ -0.25
CCDC57-216ENST00000582885 PFKFB1P16118 471 aa13.52□□□□□ -0.25
CCDC57-216ENST00000582885 UBA7P41226 1012 aa13.52□□□□□ -0.25
CCDC57-216ENST00000582885 KRT76Q01546 638 aa13.52□□□□□ -0.25
CCDC57-216ENST00000582885 ITGB3BPQ13352 177 aaPredicted RBP13.52□□□□□ -0.25
CCDC57-216ENST00000582885 FMR1NBQ8N0W7 255 aaPredicted RBP13.52□□□□□ -0.25
CCDC57-216ENST00000582885 KCTD17Q8N5Z5 321 aa13.52□□□□□ -0.25
CCDC57-216ENST00000582885 RDM1Q8NG50 284 aa13.52□□□□□ -0.25
CCDC57-216ENST00000582885 SCFD2Q8WU76 684 aa13.52□□□□□ -0.25
CCDC57-216ENST00000582885 SYMPKQ92797 1274 aaKnown RBP13.52□□□□□ -0.25
CCDC57-216ENST00000582885 EPSTI1Q96J88 318 aa13.52□□□□□ -0.25
CCDC57-216ENST00000582885 SDF4Q9BRK5 362 aa13.52□□□□□ -0.25
CCDC57-216ENST00000582885 USP25Q9UHP3 1055 aa13.52□□□□□ -0.25
CCDC57-216ENST00000582885 KCNH3Q9ULD8 1083 aa13.52□□□□□ -0.25
CCDC57-216ENST00000582885 ARID2Q68CP9 1835 aa13.52□□□□□ -0.25
CCDC57-216ENST00000582885 POTEMA6NI47 508 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 LIG1P18858 919 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 CYP2B6P20813 491 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 MUTP22033 750 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 SFNP31947 248 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 NDUFA8P51970 172 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 PRMT2P55345 433 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 SNW1Q13573 536 aaKnown RBP13.51□□□□□ -0.25
CCDC57-216ENST00000582885 NEDD9Q14511 834 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 SPECC1Q5M775 1068 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 HYIQ5T013 277 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 KRT79Q5XKE5 535 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 ZNF746Q6NUN9 644 aaPredicted RBP13.51□□□□□ -0.25
CCDC57-216ENST00000582885 TAPT1Q6NXT6 567 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 CCDC62Q6P9F0 684 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 SEPT14Q6ZU15 432 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 USP49Q70CQ1 688 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 ERMNQ8TAM6 284 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 GJA10Q969M2 543 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 TIGD1Q96MW7 591 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 MMTAG2Q9BU76 263 aaKnown RBP13.51□□□□□ -0.25
CCDC57-216ENST00000582885 GOLPH3LQ9H4A5 285 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 CCDC39Q9UFE4 941 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 SRRDQ9UH36 339 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 NRBP1Q9UHY1 535 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 DDX41Q9UJV9 622 aaKnown RBP13.51□□□□□ -0.25
CCDC57-216ENST00000582885 MYH11P35749 1972 aa13.51□□□□□ -0.25
CCDC57-216ENST00000582885 KDM3AQ9Y4C1 1321 aa13.5□□□□□ -0.25
CCDC57-216ENST00000582885 SYKP43405 635 aa13.5□□□□□ -0.25
CCDC57-216ENST00000582885 FLT3LGP49771 235 aa13.5□□□□□ -0.25
CCDC57-216ENST00000582885 JAK3P52333 1124 aa13.5□□□□□ -0.25
CCDC57-216ENST00000582885 TTLL4Q14679 1199 aa13.5□□□□□ -0.25
CCDC57-216ENST00000582885 EPHA7Q15375 998 aa13.5□□□□□ -0.25
CCDC57-216ENST00000582885 HAUS3Q68CZ6 603 aa13.5□□□□□ -0.25
CCDC57-216ENST00000582885 IQSEC1Q6DN90 963 aa13.5□□□□□ -0.25
CCDC57-216ENST00000582885 CABP7Q86V35 215 aa13.5□□□□□ -0.25
CCDC57-216ENST00000582885 FBXO16Q8IX29 292 aaPredicted RBP13.5□□□□□ -0.25
CCDC57-216ENST00000582885 ELOA2Q8IYF1 753 aaPredicted RBP13.5□□□□□ -0.25
CCDC57-216ENST00000582885 CD99L2Q8TCZ2 262 aa13.5□□□□□ -0.25
CCDC57-216ENST00000582885 NEK9Q8TD19 979 aa13.5□□□□□ -0.25
CCDC57-216ENST00000582885 ZNF296Q8WUU4 475 aaPredicted RBP13.5□□□□□ -0.25
CCDC57-216ENST00000582885 POLR3CQ9BUI4 534 aaPredicted RBP13.5□□□□□ -0.25
CCDC57-216ENST00000582885 DDX19AQ9NUU7 478 aaKnown RBP13.5□□□□□ -0.25
CCDC57-216ENST00000582885 FLRT1Q9NZU1 646 aa13.5□□□□□ -0.25
CCDC57-216ENST00000582885 TCEAL9Q9UHQ7 104 aa13.5□□□□□ -0.25
CCDC57-216ENST00000582885 GABRQQ9UN88 632 aa13.5□□□□□ -0.25
CCDC57-216ENST00000582885 KAT6AQ92794 2004 aa13.5□□□□□ -0.25
CCDC57-216ENST00000582885 FRMPD3Q5JV73 1810 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 PP2D1A8MPX8 630 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 NR1I2O75469 434 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 ZNF202O95125 648 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 UBA1P22314 1058 aaKnown RBP13.49□□□□□ -0.25
CCDC57-216ENST00000582885 RPA1P27694 616 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 CAP1Q01518 475 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 SP2Q02086 613 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 PRKCZQ05513 592 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 ACVR2BQ13705 512 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 NCAPH2Q6IBW4 605 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 EEPD1Q7L9B9 569 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 SMAP1Q8IYB5 467 aaPredicted RBP13.49□□□□□ -0.25
CCDC57-216ENST00000582885 IQUBQ8NA54 791 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 SYAP1Q96A49 352 aaPredicted RBP13.49□□□□□ -0.25
CCDC57-216ENST00000582885 CALML4Q96GE6 196 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 UIMC1Q96RL1 719 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 HSD17B14Q9BPX1 270 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 NT5C3AQ9H0P0 336 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 UNC45AQ9H3U1 944 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 CUEDC2Q9H467 287 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 JPH1Q9HDC5 661 aaPredicted RBP13.49□□□□□ -0.25
CCDC57-216ENST00000582885 TUFT1Q9NNX1 390 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 DACT1Q9NYF0 836 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 SLC9A2Q9UBY0 812 aa13.49□□□□□ -0.25
CCDC57-216ENST00000582885 WDR64B1ANS9 1081 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 EML1O00423 815 aa13.48□□□□□ -0.25
CCDC57-216ENST00000582885 NKRFO15226 690 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCDC57-216ENST00000582885 POLR2DO15514 142 aaKnown RBP13.48□□□□□ -0.25
CCDC57-216ENST00000582885 KINO60870 393 aaKnown RBP13.48□□□□□ -0.25
CCDC57-216ENST00000582885 ECM2O94769 699 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms