RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	ZNF574	Q6ZN55	896 aa	Predicted RBP	6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	ARMCX2	Q7L311	632 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	RASGRP2	Q7LDG7	609 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	OTOP3	Q7RTS5	596 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	RAB44	Q7Z6P3	723 aa	Predicted RBP	6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	FAM160A2	Q8N612	972 aa	Predicted RBP	6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	GPR152	Q8TDT2	470 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	CASP10	Q92851	521 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	NXPE3	Q969Y0	559 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	ZNF689	Q96CS4	500 aa	Predicted RBP	6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	FEZ1	Q99689	392 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	MTG1	Q9BT17	334 aa	Predicted RBP	6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	ZNF768	Q9H5H4	540 aa	Known RBP	6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	ADAMTS5	Q9UNA0	930 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	NID2	Q14112	1375 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	MYH15	Q9Y2K3	1946 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	PTPRB	P23467	1997 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	CLEC18A	A5D8T8	446 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	ERVH48-1	M5A8F1	160 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	FSCN2	O14926	492 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	EPN2	O95208	641 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	FGD1	P98174	961 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	IFIT5	Q13325	482 aa	Known RBP	6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	PLS1	Q14651	629 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	TMEM132B	Q14DG7	1078 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	PTGIS	Q16647	500 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	CLEC18B	Q6UXF7	455 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	RSPO2	Q6UXX9	243 aa	Predicted RBP	6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	UBE3B	Q7Z3V4	1068 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	FAM133A	Q8N9E0	248 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	CLEC18C	Q8NCF0	446 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	DBF4B	Q8NFT6	615 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	PSMG3-AS1	Q96PY0	264 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	MYADM	Q96S97	322 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	IER2	Q9BTL4	223 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	PI4KB	Q9UBF8	816 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	DBR1	Q9UK59	544 aa	Known RBP	6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	ADAMTS8	Q9UP79	889 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	NOD1	Q9Y239	953 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	PCDHGA5	Q9Y5G8	931 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	FBN1	P35555	2871 aa	Known RBP	6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	HIVEP1	P15822	2718 aa		6.25	□□□□□ -1.41
MSI2-216	ENST00000582772	SLC28A2	O43868	658 aa		6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	DDX58	O95786	925 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	LDHB	P07195	334 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	C6	P13671	934 aa		6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	UBAP2L	Q14157	1087 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	PPP2R5D	Q14738	602 aa		6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	ZYX	Q15942	572 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	TRIM71	Q2Q1W2	868 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	FAM47C	Q5HY64	1035 aa		6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	KANK3	Q6NY19	840 aa		6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	SLC4A10	Q6U841	1118 aa		6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	CCNI2	Q6ZMN8	369 aa	Predicted RBP	6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	LDHAL6A	Q6ZMR3	332 aa		6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	KRT25	Q7Z3Z0	450 aa		6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	SLC44A3	Q8N4M1	653 aa		6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	KLHL23	Q8NBE8	558 aa		6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	MDM1	Q8TC05	714 aa		6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	APOL5	Q9BWW9	433 aa		6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	DHX36	Q9H2U1	1008 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-216	ENST00000582772	ICE1	Q9Y2F5	2266 aa		6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	DYNC1LI2	O43237	492 aa	Predicted RBP	6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	HR	O43593	1189 aa		6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	PLIN1	O60240	522 aa		6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	UPP2	O95045	317 aa		6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	RAP1GAP	P47736	663 aa		6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	CPT1A	P50416	773 aa		6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	PRKCQ	Q04759	706 aa		6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	LY6D	Q14210	128 aa		6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	ATAT1	Q5SQI0	421 aa		6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	TICAM1	Q8IUC6	712 aa		6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	CCDC144CP	Q8IYA2	1237 aa		6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	EDEM2	Q9BV94	578 aa		6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	ZNF214	Q9UL59	606 aa	Predicted RBP	6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	PRR12	Q9ULL5	1215 aa		6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	NBEAL1	Q6ZS30	2694 aa		6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	SDK1	Q7Z5N4	2213 aa		6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	NIPBL	Q6KC79	2804 aa	eCLIP	6.23	□□□□□ -1.41
MSI2-216	ENST00000582772	CSMD2	Q7Z408	3487 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	FN1	P02751	2386 aa	Known RBP	6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	GPR75-ASB3	A0A0A6YYF3	556 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	C4orf47	A7E2U8	309 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	NEURL1B	A8MQ27	555 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	TERT	O14746	1132 aa	Known RBP	6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	KPNA6	O60684	536 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	RDX	P35241	583 aa	Known RBP	6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	POLA2	Q14181	598 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	ZNF423	Q2M1K9	1284 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	TMEM63B	Q5T3F8	832 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	IQSEC1	Q6DN90	963 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	TATDN1	Q6P1N9	297 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	CCDC149	Q6ZUS6	474 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	AFG1L	Q8WV93	481 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	ATG4C	Q96DT6	458 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	ARRDC1-AS1	Q9H2J1	176 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	CNNM1	Q9NRU3	951 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	VPS45	Q9NRW7	570 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	FRMPD4	Q14CM0	1322 aa		6.22	□□□□□ -1.41
MSI2-216	ENST00000582772	ANKHD1	Q8IWZ3	2542 aa	Known RBP	6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms