RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 RNF26Q9BY78 433 aaPredicted RBP21.45■■□□□ 1.02
LIMS2-218ENST00000582671 IL23AQ9NPF7 189 aa21.45■■□□□ 1.02
LIMS2-218ENST00000582671 JADE2Q9NQC1 790 aa21.45■■□□□ 1.02
LIMS2-218ENST00000582671 GTF2IRD1Q9UHL9 959 aa21.45■■□□□ 1.02
LIMS2-218ENST00000582671 KCNA2P16389 499 aa21.44■■□□□ 1.02
LIMS2-218ENST00000582671 TEX2Q8IWB9 1127 aa21.44■■□□□ 1.02
LIMS2-218ENST00000582671 C7orf31Q8N865 590 aa21.44■■□□□ 1.02
LIMS2-218ENST00000582671 CYP2W1Q8TAV3 490 aa21.44■■□□□ 1.02
LIMS2-218ENST00000582671 ZNF274Q96GC6 653 aaPredicted RBP21.44■■□□□ 1.02
LIMS2-218ENST00000582671 ZMYND12Q9H0C1 365 aa21.44■■□□□ 1.02
LIMS2-218ENST00000582671 ESYT2A0FGR8 921 aa21.43■■□□□ 1.02
LIMS2-218ENST00000582671 FOSP01100 380 aaPredicted RBP21.43■■□□□ 1.02
LIMS2-218ENST00000582671 LGALS2P05162 132 aa21.43■■□□□ 1.02
LIMS2-218ENST00000582671 SP4Q02446 784 aa21.43■■□□□ 1.02
LIMS2-218ENST00000582671 STK3Q13188 491 aa21.43■■□□□ 1.02
LIMS2-218ENST00000582671 MTMR1Q13613 665 aa21.43■■□□□ 1.02
LIMS2-218ENST00000582671 JAKMIP3Q5VZ66 844 aa21.43■■□□□ 1.02
LIMS2-218ENST00000582671 PKD2L1Q9P0L9 805 aa21.43■■□□□ 1.02
LIMS2-218ENST00000582671 WDR81Q562E7 1941 aa21.43■■□□□ 1.02
LIMS2-218ENST00000582671 NOP56O00567 594 aaKnown RBP21.42■■□□□ 1.02
LIMS2-218ENST00000582671 ANAPC15P60006 121 aa21.42■■□□□ 1.02
LIMS2-218ENST00000582671 ZNF200P98182 395 aaPredicted RBP21.42■■□□□ 1.02
LIMS2-218ENST00000582671 AP3B2Q13367 1082 aa21.42■■□□□ 1.02
LIMS2-218ENST00000582671 RASIP1Q5U651 963 aa21.42■■□□□ 1.02
LIMS2-218ENST00000582671 DHX38Q92620 1227 aaKnown RBP21.42■■□□□ 1.02
LIMS2-218ENST00000582671 MXRA8Q9BRK3 442 aa21.42■■□□□ 1.02
LIMS2-218ENST00000582671 GLT8D2Q9H1C3 349 aa21.42■■□□□ 1.02
LIMS2-218ENST00000582671 EHMT1Q9H9B1 1298 aa21.42■■□□□ 1.02
LIMS2-218ENST00000582671 NOD1Q9Y239 953 aa21.42■■□□□ 1.02
LIMS2-218ENST00000582671 PTPRSQ13332 1948 aa21.41■■□□□ 1.02
LIMS2-218ENST00000582671 H3BRB1 525 aa21.41■■□□□ 1.02
LIMS2-218ENST00000582671 SREBF1P36956 1147 aa21.41■■□□□ 1.02
LIMS2-218ENST00000582671 AKAP17AQ02040 695 aaKnown RBP21.41■■□□□ 1.02
LIMS2-218ENST00000582671 FAM109BQ6ICB4 259 aaPredicted RBP21.41■■□□□ 1.02
LIMS2-218ENST00000582671 PSRC1Q6PGN9 363 aaPredicted RBP21.41■■□□□ 1.02
LIMS2-218ENST00000582671 TRIM50Q86XT4 487 aa21.41■■□□□ 1.02
LIMS2-218ENST00000582671 DEFB123Q8N688 67 aa21.41■■□□□ 1.02
LIMS2-218ENST00000582671 IL17RAQ96F46 866 aa21.41■■□□□ 1.02
LIMS2-218ENST00000582671 CDHR1Q96JP9 859 aa21.41■■□□□ 1.02
LIMS2-218ENST00000582671 TUT1Q9H6E5 874 aaKnown RBP21.41■■□□□ 1.02
LIMS2-218ENST00000582671 C6orf50Q9HD87 102 aa21.41■■□□□ 1.02
LIMS2-218ENST00000582671 VPS54Q9P1Q0 977 aa21.41■■□□□ 1.02
LIMS2-218ENST00000582671 GSTTP1A0A1W2PQM5 241 aa21.4■■□□□ 1.02
LIMS2-218ENST00000582671 RBAK-RBAKDNI3L0D1 243 aa21.4■■□□□ 1.02
LIMS2-218ENST00000582671 PITPNM1O00562 1244 aa21.4■■□□□ 1.02
LIMS2-218ENST00000582671 IQCF3P0C7M6 154 aa21.4■■□□□ 1.02
LIMS2-218ENST00000582671 ARP10275 920 aa21.4■■□□□ 1.02
LIMS2-218ENST00000582671 SMAD3P84022 425 aaKnown RBP21.4■■□□□ 1.02
LIMS2-218ENST00000582671 UTP14CQ5TAP6 766 aaKnown RBP21.4■■□□□ 1.02
LIMS2-218ENST00000582671 GIMAP8Q8ND71 665 aaPredicted RBP21.4■■□□□ 1.02
LIMS2-218ENST00000582671 CRYGNQ8WXF5 182 aa21.4■■□□□ 1.02
LIMS2-218ENST00000582671 WNT8BQ93098 351 aa21.4■■□□□ 1.02
LIMS2-218ENST00000582671 KCNH7Q9NS40 1196 aa21.4■■□□□ 1.02
LIMS2-218ENST00000582671 CXXC1Q9P0U4 656 aaPredicted RBP21.4■■□□□ 1.02
LIMS2-218ENST00000582671 TPCN1Q9ULQ1 816 aa21.4■■□□□ 1.02
LIMS2-218ENST00000582671 MAFGO15525 162 aa21.39■■□□□ 1.01
LIMS2-218ENST00000582671 FGBP02675 491 aa21.39■■□□□ 1.01
LIMS2-218ENST00000582671 ARHGAP4P98171 946 aa21.39■■□□□ 1.01
LIMS2-218ENST00000582671 SCRN1Q12765 414 aa21.39■■□□□ 1.01
LIMS2-218ENST00000582671 OTOP2Q7RTS6 562 aa21.39■■□□□ 1.01
LIMS2-218ENST00000582671 RASGRP4Q8TDF6 673 aa21.39■■□□□ 1.01
LIMS2-218ENST00000582671 CCDC12Q8WUD4 166 aaPredicted RBP21.39■■□□□ 1.01
LIMS2-218ENST00000582671 HERVK_113Q902F9 699 aa21.39■■□□□ 1.01
LIMS2-218ENST00000582671 GRXCR1A8MXD5 290 aa21.38■■□□□ 1.01
LIMS2-218ENST00000582671 MEIS1O00470 390 aa21.38■■□□□ 1.01
LIMS2-218ENST00000582671 DTNBO60941 627 aa21.38■■□□□ 1.01
LIMS2-218ENST00000582671 TCF7P36402 384 aaPredicted RBP21.38■■□□□ 1.01
LIMS2-218ENST00000582671 AK2P54819 239 aa21.38■■□□□ 1.01
LIMS2-218ENST00000582671 SSRP1Q08945 709 aaKnown RBP21.38■■□□□ 1.01
LIMS2-218ENST00000582671 BFSP2Q13515 415 aa21.38■■□□□ 1.01
LIMS2-218ENST00000582671 GPNMBQ14956 572 aa21.38■■□□□ 1.01
LIMS2-218ENST00000582671 CEP55Q53EZ4 464 aa21.38■■□□□ 1.01
LIMS2-218ENST00000582671 DEFB128Q7Z7B8 93 aa21.38■■□□□ 1.01
LIMS2-218ENST00000582671 RPUSD2Q8IZ73 545 aaKnown RBP21.38■■□□□ 1.01
LIMS2-218ENST00000582671 REXO1Q8N1G1 1221 aaKnown RBP21.38■■□□□ 1.01
LIMS2-218ENST00000582671 RETREG2Q8NC44 543 aa21.38■■□□□ 1.01
LIMS2-218ENST00000582671 MTMR10Q9NXD2 777 aa21.38■■□□□ 1.01
LIMS2-218ENST00000582671 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.37■■□□□ 1.01
LIMS2-218ENST00000582671 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.37■■□□□ 1.01
LIMS2-218ENST00000582671 FAM86B1E9PN63 330 aa21.37■■□□□ 1.01
LIMS2-218ENST00000582671 CPLX1O14810 134 aa21.37■■□□□ 1.01
LIMS2-218ENST00000582671 FAM86B2P0C5J1 330 aa21.37■■□□□ 1.01
LIMS2-218ENST00000582671 SMIM10L2AP0DMW4 78 aa21.37■■□□□ 1.01
LIMS2-218ENST00000582671 SMIM10L2BP0DMW5 78 aa21.37■■□□□ 1.01
LIMS2-218ENST00000582671 GNA11P29992 359 aa21.37■■□□□ 1.01
LIMS2-218ENST00000582671 HOXC8P31273 242 aa21.37■■□□□ 1.01
LIMS2-218ENST00000582671 RBL2Q08999 1139 aa21.37■■□□□ 1.01
LIMS2-218ENST00000582671 TRIM71Q2Q1W2 868 aaKnown RBP21.37■■□□□ 1.01
LIMS2-218ENST00000582671 TRIM22Q8IYM9 498 aa21.37■■□□□ 1.01
LIMS2-218ENST00000582671 CAGE1Q8TC20 777 aa21.37■■□□□ 1.01
LIMS2-218ENST00000582671 AIFM3Q96NN9 605 aa21.37■■□□□ 1.01
LIMS2-218ENST00000582671 RNPEPQ9H4A4 650 aa21.37■■□□□ 1.01
LIMS2-218ENST00000582671 AGO4Q9HCK5 861 aaKnown RBP21.37■■□□□ 1.01
LIMS2-218ENST00000582671 MYH9P35579 1960 aaKnown RBP21.37■■□□□ 1.01
LIMS2-218ENST00000582671 SIP14410 1827 aa21.36■■□□□ 1.01
LIMS2-218ENST00000582671 CYP3A4P08684 503 aa21.36■■□□□ 1.01
LIMS2-218ENST00000582671 PTK7Q13308 1070 aa21.36■■□□□ 1.01
LIMS2-218ENST00000582671 ITGB3BPQ13352 177 aaPredicted RBP21.36■■□□□ 1.01
LIMS2-218ENST00000582671 TRAF7Q6Q0C0 670 aa21.36■■□□□ 1.01
LIMS2-218ENST00000582671 CCDC148Q8NFR7 591 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms