RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 FOSBP53539 338 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 FOXK2Q01167 660 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 CLUL1Q15846 466 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 KIAA0753Q2KHM9 967 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 CTC1Q2NKJ3 1217 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 PLEKHG4Q58EX7 1191 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 FBXO11Q86XK2 927 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 DHX37Q8IY37 1157 aaKnown RBP8.95□□□□□ -0.98
CCDC47-205ENST00000582331 RGS22Q8NE09 1264 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 WNT8BQ93098 351 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 TOP1MTQ969P6 601 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 INCENPQ9NQS7 918 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 ZBTB40Q9NUA8 1239 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.95□□□□□ -0.98
CCDC47-205ENST00000582331 FRMPD2Q68DX3 1309 aaPredicted RBP8.95□□□□□ -0.98
CCDC47-205ENST00000582331 USP34Q70CQ2 3546 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 RBAK-RBAKDNI3L0D1 243 aa8.94□□□□□ -0.98
CCDC47-205ENST00000582331 STXBP3O00186 592 aa8.94□□□□□ -0.98
CCDC47-205ENST00000582331 HAS3O00219 553 aa8.94□□□□□ -0.98
CCDC47-205ENST00000582331 GFRA3O60609 400 aa8.94□□□□□ -0.98
CCDC47-205ENST00000582331 F2P00734 622 aa8.94□□□□□ -0.98
CCDC47-205ENST00000582331 TOP1P11387 765 aaKnown RBP8.94□□□□□ -0.98
CCDC47-205ENST00000582331 THPOP40225 353 aa8.94□□□□□ -0.98
CCDC47-205ENST00000582331 ZNF200P98182 395 aaPredicted RBP8.94□□□□□ -0.98
CCDC47-205ENST00000582331 CTDSPL2Q05D32 466 aa8.94□□□□□ -0.98
CCDC47-205ENST00000582331 DLX2Q07687 328 aaPredicted RBP8.94□□□□□ -0.98
CCDC47-205ENST00000582331 SMAD4Q13485 552 aaKnown RBP8.94□□□□□ -0.98
CCDC47-205ENST00000582331 LAMC2Q13753 1193 aa8.94□□□□□ -0.98
CCDC47-205ENST00000582331 STXBP2Q15833 593 aa8.94□□□□□ -0.98
CCDC47-205ENST00000582331 TRIM67Q6ZTA4 783 aa8.94□□□□□ -0.98
CCDC47-205ENST00000582331 SUGP1Q8IWZ8 645 aaKnown RBP8.94□□□□□ -0.98
CCDC47-205ENST00000582331 SEPT8Q92599 483 aa8.94□□□□□ -0.98
CCDC47-205ENST00000582331 GPATCH3Q96I76 525 aa8.94□□□□□ -0.98
CCDC47-205ENST00000582331 SEC62Q99442 399 aaKnown RBP8.94□□□□□ -0.98
CCDC47-205ENST00000582331 LMAN2LQ9H0V9 348 aa8.94□□□□□ -0.98
CCDC47-205ENST00000582331 DDX41Q9UJV9 622 aaKnown RBP8.94□□□□□ -0.98
CCDC47-205ENST00000582331 DDX19BQ9UMR2 479 aa8.94□□□□□ -0.98
CCDC47-205ENST00000582331 WDR19Q8NEZ3 1342 aa8.94□□□□□ -0.98
CCDC47-205ENST00000582331 ZNF318Q5VUA4 2279 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 RB1P06400 928 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 ZNF286BP0CG31 522 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 CTNNB1P35222 781 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 HYAL1Q12794 435 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 TCF15Q12870 199 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 USH1GQ495M9 461 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 FIBCD1Q8N539 461 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 NSUN6Q8TEA1 469 aaKnown RBP8.93□□□□□ -0.98
CCDC47-205ENST00000582331 EMID1Q96A84 441 aaPredicted RBP8.93□□□□□ -0.98
CCDC47-205ENST00000582331 IL17RAQ96F46 866 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 TAAR1Q96RJ0 339 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 IWS1Q96ST2 819 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 TMEM47Q9BQJ4 181 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 MAF1Q9H063 256 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 IRF2BPLQ9H1B7 796 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 CHMP4BQ9H444 224 aaKnown RBP8.93□□□□□ -0.98
CCDC47-205ENST00000582331 IGFLR1Q9H665 355 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 CD207Q9UJ71 328 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 CFAP54Q96N23 3096 aa8.93□□□□□ -0.98
CCDC47-205ENST00000582331 C5orf67F2Z3F1 127 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 ORC4O43929 436 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 PPFIA4O75335 1185 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 EIF3JO75822 258 aaKnown RBP8.92□□□□□ -0.98
CCDC47-205ENST00000582331 PDHBP11177 359 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 BMPR1AP36894 532 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 ZXDAP98168 799 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 ZNF543Q08ER8 600 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 CAMK2BQ13554 666 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 HIC1Q14526 733 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 DMRTA1Q5VZB9 504 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 TSHZ3Q63HK5 1081 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 SERINC5Q86VE9 423 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 FBXL6Q8N531 539 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 PPTC7Q8NI37 304 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 SYTL5Q8TDW5 730 aaPredicted RBP8.92□□□□□ -0.98
CCDC47-205ENST00000582331 TBC1D5Q92609 795 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 KCNK17Q96T54 332 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 RMDN3Q96TC7 470 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 C11orf84Q9BUA3 381 aaPredicted RBP8.92□□□□□ -0.98
CCDC47-205ENST00000582331 IFIH1Q9BYX4 1025 aaKnown RBP8.92□□□□□ -0.98
CCDC47-205ENST00000582331 ANAPC4Q9UJX5 808 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 MRVI1Q9Y6F6 885 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 MICAL3Q7RTP6 2002 aa8.92□□□□□ -0.98
CCDC47-205ENST00000582331 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.91□□□□□ -0.98
CCDC47-205ENST00000582331 GRM6O15303 877 aa8.91□□□□□ -0.98
CCDC47-205ENST00000582331 TBX10O75333 385 aa8.91□□□□□ -0.98
CCDC47-205ENST00000582331 ADAM15Q13444 863 aa8.91□□□□□ -0.98
CCDC47-205ENST00000582331 RRP12Q5JTH9 1297 aaKnown RBP8.91□□□□□ -0.98
CCDC47-205ENST00000582331 ZMYM1Q5SVZ6 1142 aa8.91□□□□□ -0.98
CCDC47-205ENST00000582331 ARHGEF16Q5VV41 709 aa8.91□□□□□ -0.98
CCDC47-205ENST00000582331 MCF2L2Q86YR7 1114 aa8.91□□□□□ -0.98
CCDC47-205ENST00000582331 ATOH1Q92858 354 aaPredicted RBP8.91□□□□□ -0.98
CCDC47-205ENST00000582331 APBB2Q92870 758 aa8.91□□□□□ -0.98
CCDC47-205ENST00000582331 ATP6V0A1Q93050 837 aa8.91□□□□□ -0.98
CCDC47-205ENST00000582331 TTC14Q96N46 770 aa8.91□□□□□ -0.98
CCDC47-205ENST00000582331 TOMM22Q9NS69 142 aa8.91□□□□□ -0.98
CCDC47-205ENST00000582331 TCP11L1Q9NUJ3 509 aa8.91□□□□□ -0.98
CCDC47-205ENST00000582331 FAM86C1Q9NVL1 165 aa8.91□□□□□ -0.98
CCDC47-205ENST00000582331 COL20A1Q9P218 1284 aa8.91□□□□□ -0.98
CCDC47-205ENST00000582331 RWDD3Q9Y3V2 267 aa8.91□□□□□ -0.98
CCDC47-205ENST00000582331 COL4A6Q14031 1691 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms