RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 PKD2L1Q9P0L9 805 aa22.73■■□□□ 1.23
TOP3A-213ENST00000582230 CENPFP49454 3210 aa22.73■■□□□ 1.23
TOP3A-213ENST00000582230 KIAA1217Q5T5P2 1943 aa22.72■■□□□ 1.23
TOP3A-213ENST00000582230 MYADML2A6NDP7 307 aa22.72■■□□□ 1.23
TOP3A-213ENST00000582230 MOXD2PA6NHM9 499 aa22.72■■□□□ 1.23
TOP3A-213ENST00000582230 FARP2O94887 1054 aaPredicted RBP22.72■■□□□ 1.23
TOP3A-213ENST00000582230 BEX3Q00994 111 aa22.72■■□□□ 1.23
TOP3A-213ENST00000582230 ORC2Q13416 577 aaPredicted RBP22.72■■□□□ 1.23
TOP3A-213ENST00000582230 KCNA10Q16322 511 aa22.72■■□□□ 1.23
TOP3A-213ENST00000582230 NOP56O00567 594 aaKnown RBP22.71■■□□□ 1.23
TOP3A-213ENST00000582230 TBX3O15119 743 aa22.71■■□□□ 1.23
TOP3A-213ENST00000582230 MSH4O15457 936 aa22.71■■□□□ 1.23
TOP3A-213ENST00000582230 MNX1P50219 401 aaPredicted RBP22.71■■□□□ 1.23
TOP3A-213ENST00000582230 RILPL1Q5EBL4 403 aa22.71■■□□□ 1.23
TOP3A-213ENST00000582230 FAM20AQ96MK3 541 aa22.71■■□□□ 1.23
TOP3A-213ENST00000582230 RIT2Q99578 217 aa22.71■■□□□ 1.23
TOP3A-213ENST00000582230 JPH1Q9HDC5 661 aaPredicted RBP22.71■■□□□ 1.23
TOP3A-213ENST00000582230 POLR3EQ9NVU0 708 aa22.71■■□□□ 1.23
TOP3A-213ENST00000582230 PHF24Q9UPV7 400 aa22.71■■□□□ 1.23
TOP3A-213ENST00000582230 MTMR6Q9Y217 621 aa22.71■■□□□ 1.23
TOP3A-213ENST00000582230 SLC37A4O43826 429 aa22.7■■□□□ 1.22
TOP3A-213ENST00000582230 PPFIA4O75335 1185 aa22.7■■□□□ 1.22
TOP3A-213ENST00000582230 ATP2B1P20020 1258 aa22.7■■□□□ 1.22
TOP3A-213ENST00000582230 ACLYP53396 1101 aa22.7■■□□□ 1.22
TOP3A-213ENST00000582230 IRX5P78411 483 aaPredicted RBP22.7■■□□□ 1.22
TOP3A-213ENST00000582230 ITGB3BPQ13352 177 aaPredicted RBP22.7■■□□□ 1.22
TOP3A-213ENST00000582230 DGKDQ16760 1214 aa22.7■■□□□ 1.22
TOP3A-213ENST00000582230 HSDL1Q3SXM5 330 aa22.7■■□□□ 1.22
TOP3A-213ENST00000582230 SLC5A5Q92911 643 aa22.7■■□□□ 1.22
TOP3A-213ENST00000582230 BCAS3Q9H6U6 928 aa22.7■■□□□ 1.22
TOP3A-213ENST00000582230 SLC9A2Q9UBY0 812 aa22.7■■□□□ 1.22
TOP3A-213ENST00000582230 TCEAL9Q9UHQ7 104 aa22.7■■□□□ 1.22
TOP3A-213ENST00000582230 MYH7BA7E2Y1 1941 aa22.7■■□□□ 1.22
TOP3A-213ENST00000582230 DHX15O43143 795 aaKnown RBP22.69■■□□□ 1.22
TOP3A-213ENST00000582230 SORBS3O60504 671 aa22.69■■□□□ 1.22
TOP3A-213ENST00000582230 NEMFO60524 1076 aa22.69■■□□□ 1.22
TOP3A-213ENST00000582230 CABYRO75952 493 aa22.69■■□□□ 1.22
TOP3A-213ENST00000582230 ASGR1P07306 291 aa22.69■■□□□ 1.22
TOP3A-213ENST00000582230 MMP3P08254 477 aa22.69■■□□□ 1.22
TOP3A-213ENST00000582230 HOXD8P13378 290 aaPredicted RBP22.69■■□□□ 1.22
TOP3A-213ENST00000582230 TTC38Q5R3I4 469 aa22.69■■□□□ 1.22
TOP3A-213ENST00000582230 NECAB2Q7Z6G3 386 aa22.69■■□□□ 1.22
TOP3A-213ENST00000582230 ETNPPLQ8TBG4 499 aa22.69■■□□□ 1.22
TOP3A-213ENST00000582230 ZSCAN16Q9H4T2 348 aaPredicted RBP22.69■■□□□ 1.22
TOP3A-213ENST00000582230 KCNMB3Q9NPA1 279 aa22.69■■□□□ 1.22
TOP3A-213ENST00000582230 MARCH6O60337 910 aa22.68■■□□□ 1.22
TOP3A-213ENST00000582230 GAS7O60861 476 aa22.68■■□□□ 1.22
TOP3A-213ENST00000582230 BAG4O95429 457 aaKnown RBP22.68■■□□□ 1.22
TOP3A-213ENST00000582230 COL6A1P12109 1028 aa22.68■■□□□ 1.22
TOP3A-213ENST00000582230 MCM7P33993 719 aa22.68■■□□□ 1.22
TOP3A-213ENST00000582230 TOB1P50616 345 aaPredicted RBP22.68■■□□□ 1.22
TOP3A-213ENST00000582230 LRCH2Q5VUJ6 765 aa22.68■■□□□ 1.22
TOP3A-213ENST00000582230 UBE2Q1Q7Z7E8 422 aa22.68■■□□□ 1.22
TOP3A-213ENST00000582230 FERMT3Q86UX7 667 aa22.68■■□□□ 1.22
TOP3A-213ENST00000582230 SLFN12Q8IYM2 578 aa22.68■■□□□ 1.22
TOP3A-213ENST00000582230 SEPT1Q8WYJ6 367 aa22.68■■□□□ 1.22
TOP3A-213ENST00000582230 PAWRQ96IZ0 340 aaKnown RBP22.68■■□□□ 1.22
TOP3A-213ENST00000582230 GPR20Q99678 358 aa22.68■■□□□ 1.22
TOP3A-213ENST00000582230 C11orf49Q9H6J7 331 aa22.68■■□□□ 1.22
TOP3A-213ENST00000582230 DAXXQ9UER7 740 aaPredicted RBP22.68■■□□□ 1.22
TOP3A-213ENST00000582230 WNT7AO00755 349 aa22.67■■□□□ 1.22
TOP3A-213ENST00000582230 MYL3P08590 195 aa22.67■■□□□ 1.22
TOP3A-213ENST00000582230 PURAQ00577 322 aaKnown RBP22.67■■□□□ 1.22
TOP3A-213ENST00000582230 KRT76Q01546 638 aa22.67■■□□□ 1.22
TOP3A-213ENST00000582230 CALCRLQ16602 461 aa22.67■■□□□ 1.22
TOP3A-213ENST00000582230 ZNF746Q6NUN9 644 aaPredicted RBP22.67■■□□□ 1.22
TOP3A-213ENST00000582230 POTEDQ86YR6 584 aa22.67■■□□□ 1.22
TOP3A-213ENST00000582230 DIS3LQ8TF46 1054 aaKnown RBP22.67■■□□□ 1.22
TOP3A-213ENST00000582230 GLT1D1Q96MS3 346 aa22.67■■□□□ 1.22
TOP3A-213ENST00000582230 FRMPD3Q5JV73 1810 aa22.66■■□□□ 1.22
TOP3A-213ENST00000582230 A0A1W2PQ45 241 aaPredicted RBP22.66■■□□□ 1.22
TOP3A-213ENST00000582230 A0A1W2PQY0 241 aa22.66■■□□□ 1.22
TOP3A-213ENST00000582230 PSMD10O75832 226 aa22.66■■□□□ 1.22
TOP3A-213ENST00000582230 SP4Q02446 784 aa22.66■■□□□ 1.22
TOP3A-213ENST00000582230 RESTQ13127 1097 aa22.66■■□□□ 1.22
TOP3A-213ENST00000582230 ZNF174Q15697 407 aa22.66■■□□□ 1.22
TOP3A-213ENST00000582230 CXCL17Q6UXB2 119 aa22.66■■□□□ 1.22
TOP3A-213ENST00000582230 UIMC1Q96RL1 719 aa22.66■■□□□ 1.22
TOP3A-213ENST00000582230 MTG1Q9BT17 334 aaPredicted RBP22.66■■□□□ 1.22
TOP3A-213ENST00000582230 TEKT3Q9BXF9 490 aa22.66■■□□□ 1.22
TOP3A-213ENST00000582230 SENP6Q9GZR1 1112 aaPredicted RBP22.66■■□□□ 1.22
TOP3A-213ENST00000582230 ELP1O95163 1332 aa22.65■■□□□ 1.22
TOP3A-213ENST00000582230 DDX39AO00148 427 aaKnown RBP22.65■■□□□ 1.22
TOP3A-213ENST00000582230 ZSCAN22P10073 491 aaPredicted RBP22.65■■□□□ 1.22
TOP3A-213ENST00000582230 ACTR2P61160 394 aa22.65■■□□□ 1.22
TOP3A-213ENST00000582230 SMAP1Q8IYB5 467 aaPredicted RBP22.65■■□□□ 1.22
TOP3A-213ENST00000582230 HAS1Q92839 578 aa22.65■■□□□ 1.22
TOP3A-213ENST00000582230 PCDHB6Q9Y5E3 794 aa22.65■■□□□ 1.22
TOP3A-213ENST00000582230 GSTTP1A0A1W2PQM5 241 aa22.64■■□□□ 1.21
TOP3A-213ENST00000582230 ATG7O95352 703 aa22.64■■□□□ 1.21
TOP3A-213ENST00000582230 CCNE2O96020 404 aa22.64■■□□□ 1.21
TOP3A-213ENST00000582230 TCF7P36402 384 aaPredicted RBP22.64■■□□□ 1.21
TOP3A-213ENST00000582230 FERMT2Q96AC1 680 aa22.64■■□□□ 1.21
TOP3A-213ENST00000582230 VTI1AQ96AJ9 217 aa22.64■■□□□ 1.21
TOP3A-213ENST00000582230 MTMR9Q96QG7 549 aa22.64■■□□□ 1.21
TOP3A-213ENST00000582230 STARD7Q9NQZ5 370 aa22.64■■□□□ 1.21
TOP3A-213ENST00000582230 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.64■■□□□ 1.21
TOP3A-213ENST00000582230 KIAA0100Q14667 2235 aaKnown RBP22.63■■□□□ 1.21
TOP3A-213ENST00000582230 LAD1O00515 517 aa22.63■■□□□ 1.21
TOP3A-213ENST00000582230 SFNP31947 248 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms