RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 FGBP02675 491 aa22.31■■□□□ 1.16
SREBF1-220ENST00000581707 IFNAR1P17181 557 aa22.31■■□□□ 1.16
SREBF1-220ENST00000581707 BFSP2Q13515 415 aa22.31■■□□□ 1.16
SREBF1-220ENST00000581707 MTMR1Q13613 665 aa22.31■■□□□ 1.16
SREBF1-220ENST00000581707 ZNF274Q96GC6 653 aaPredicted RBP22.31■■□□□ 1.16
SREBF1-220ENST00000581707 PGBD1Q96JS3 809 aa22.31■■□□□ 1.16
SREBF1-220ENST00000581707 CTAGE1Q96RT6 745 aa22.31■■□□□ 1.16
SREBF1-220ENST00000581707 LARP6Q9BRS8 491 aaKnown RBP22.31■■□□□ 1.16
SREBF1-220ENST00000581707 RNF26Q9BY78 433 aaPredicted RBP22.31■■□□□ 1.16
SREBF1-220ENST00000581707 JADE2Q9NQC1 790 aa22.31■■□□□ 1.16
SREBF1-220ENST00000581707 TMEM260Q9NX78 707 aa22.31■■□□□ 1.16
SREBF1-220ENST00000581707 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.3■■□□□ 1.16
SREBF1-220ENST00000581707 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.3■■□□□ 1.16
SREBF1-220ENST00000581707 H3BRB1 525 aa22.3■■□□□ 1.16
SREBF1-220ENST00000581707 MAFGO15525 162 aa22.3■■□□□ 1.16
SREBF1-220ENST00000581707 ATP9AO75110 1047 aa22.3■■□□□ 1.16
SREBF1-220ENST00000581707 PPFIA3O75145 1194 aa22.3■■□□□ 1.16
SREBF1-220ENST00000581707 LGALS2P05162 132 aa22.3■■□□□ 1.16
SREBF1-220ENST00000581707 KCNA2P16389 499 aa22.3■■□□□ 1.16
SREBF1-220ENST00000581707 CLK2P49760 499 aaKnown RBP22.3■■□□□ 1.16
SREBF1-220ENST00000581707 SP4Q02446 784 aa22.3■■□□□ 1.16
SREBF1-220ENST00000581707 AP3B2Q13367 1082 aa22.3■■□□□ 1.16
SREBF1-220ENST00000581707 RASIP1Q5U651 963 aa22.3■■□□□ 1.16
SREBF1-220ENST00000581707 CCDC155Q8N6L0 562 aa22.3■■□□□ 1.16
SREBF1-220ENST00000581707 CCDC12Q8WUD4 166 aaPredicted RBP22.3■■□□□ 1.16
SREBF1-220ENST00000581707 HERVK_113Q902F9 699 aa22.3■■□□□ 1.16
SREBF1-220ENST00000581707 SLC26A6Q9BXS9 759 aa22.3■■□□□ 1.16
SREBF1-220ENST00000581707 ANO3Q9BYT9 981 aa22.3■■□□□ 1.16
SREBF1-220ENST00000581707 TUT1Q9H6E5 874 aaKnown RBP22.3■■□□□ 1.16
SREBF1-220ENST00000581707 ESYT2A0FGR8 921 aa22.29■■□□□ 1.16
SREBF1-220ENST00000581707 IQCF3P0C7M6 154 aa22.29■■□□□ 1.16
SREBF1-220ENST00000581707 CAGE1Q8TC20 777 aa22.29■■□□□ 1.16
SREBF1-220ENST00000581707 MXRA8Q9BRK3 442 aa22.29■■□□□ 1.16
SREBF1-220ENST00000581707 ZMYND12Q9H0C1 365 aa22.29■■□□□ 1.16
SREBF1-220ENST00000581707 MTIF3Q9H2K0 278 aaKnown RBP22.29■■□□□ 1.16
SREBF1-220ENST00000581707 C6orf50Q9HD87 102 aa22.29■■□□□ 1.16
SREBF1-220ENST00000581707 MTMR10Q9NXD2 777 aa22.29■■□□□ 1.16
SREBF1-220ENST00000581707 TELO2Q9Y4R8 837 aa22.29■■□□□ 1.16
SREBF1-220ENST00000581707 SCN5AQ14524 2016 aa22.28■■□□□ 1.16
SREBF1-220ENST00000581707 EIF5BO60841 1220 aaKnown RBP22.28■■□□□ 1.16
SREBF1-220ENST00000581707 RFC2P35250 354 aa22.28■■□□□ 1.16
SREBF1-220ENST00000581707 SREBF1P36956 1147 aa22.28■■□□□ 1.16
SREBF1-220ENST00000581707 ANAPC15P60006 121 aa22.28■■□□□ 1.16
SREBF1-220ENST00000581707 JAKMIP3Q5VZ66 844 aa22.28■■□□□ 1.16
SREBF1-220ENST00000581707 OTOP2Q7RTS6 562 aa22.28■■□□□ 1.16
SREBF1-220ENST00000581707 DEFB128Q7Z7B8 93 aa22.28■■□□□ 1.16
SREBF1-220ENST00000581707 CYP2W1Q8TAV3 490 aa22.28■■□□□ 1.16
SREBF1-220ENST00000581707 VWCEQ96DN2 955 aa22.28■■□□□ 1.16
SREBF1-220ENST00000581707 PKD2L1Q9P0L9 805 aa22.28■■□□□ 1.16
SREBF1-220ENST00000581707 PFKMP08237 780 aa22.27■■□□□ 1.16
SREBF1-220ENST00000581707 GNA11P29992 359 aa22.27■■□□□ 1.16
SREBF1-220ENST00000581707 ZNF200P98182 395 aaPredicted RBP22.27■■□□□ 1.16
SREBF1-220ENST00000581707 UTP14CQ5TAP6 766 aaKnown RBP22.27■■□□□ 1.16
SREBF1-220ENST00000581707 ZNF697Q5TEC3 545 aa22.27■■□□□ 1.16
SREBF1-220ENST00000581707 MCTP2Q6DN12 878 aa22.27■■□□□ 1.16
SREBF1-220ENST00000581707 DHX38Q92620 1227 aaKnown RBP22.27■■□□□ 1.16
SREBF1-220ENST00000581707 KCNH7Q9NS40 1196 aa22.27■■□□□ 1.16
SREBF1-220ENST00000581707 CPLX1O14810 134 aa22.26■■□□□ 1.15
SREBF1-220ENST00000581707 ZNF76P36508 570 aa22.26■■□□□ 1.15
SREBF1-220ENST00000581707 SSRP1Q08945 709 aaKnown RBP22.26■■□□□ 1.15
SREBF1-220ENST00000581707 STK3Q13188 491 aa22.26■■□□□ 1.15
SREBF1-220ENST00000581707 PTK7Q13308 1070 aa22.26■■□□□ 1.15
SREBF1-220ENST00000581707 CEP55Q53EZ4 464 aa22.26■■□□□ 1.15
SREBF1-220ENST00000581707 TRIM22Q8IYM9 498 aa22.26■■□□□ 1.15
SREBF1-220ENST00000581707 AFAP1L1Q8TED9 768 aa22.26■■□□□ 1.15
SREBF1-220ENST00000581707 CXXC1Q9P0U4 656 aaPredicted RBP22.26■■□□□ 1.15
SREBF1-220ENST00000581707 ZNF215Q9UL58 517 aaPredicted RBP22.26■■□□□ 1.15
SREBF1-220ENST00000581707 ADAMTS3O15072 1205 aa22.25■■□□□ 1.15
SREBF1-220ENST00000581707 SMIM10L2AP0DMW4 78 aa22.25■■□□□ 1.15
SREBF1-220ENST00000581707 SMIM10L2BP0DMW5 78 aa22.25■■□□□ 1.15
SREBF1-220ENST00000581707 TCF7P36402 384 aaPredicted RBP22.25■■□□□ 1.15
SREBF1-220ENST00000581707 ARHGAP4P98171 946 aa22.25■■□□□ 1.15
SREBF1-220ENST00000581707 HIC1Q14526 733 aa22.25■■□□□ 1.15
SREBF1-220ENST00000581707 CPLX2Q6PUV4 134 aaKnown RBP22.25■■□□□ 1.15
SREBF1-220ENST00000581707 TRIM50Q86XT4 487 aa22.25■■□□□ 1.15
SREBF1-220ENST00000581707 REXO1Q8N1G1 1221 aaKnown RBP22.25■■□□□ 1.15
SREBF1-220ENST00000581707 CCDC148Q8NFR7 591 aa22.25■■□□□ 1.15
SREBF1-220ENST00000581707 BICD2Q8TD16 824 aa22.25■■□□□ 1.15
SREBF1-220ENST00000581707 SEPT1Q8WYJ6 367 aa22.25■■□□□ 1.15
SREBF1-220ENST00000581707 FAM161BQ96MY7 647 aa22.25■■□□□ 1.15
SREBF1-220ENST00000581707 TANC1Q9C0D5 1861 aa22.25■■□□□ 1.15
SREBF1-220ENST00000581707 GSTTP1A0A1W2PQM5 241 aa22.24■■□□□ 1.15
SREBF1-220ENST00000581707 C17orf102A2RUQ5 167 aa22.24■■□□□ 1.15
SREBF1-220ENST00000581707 MEIS1O00470 390 aa22.24■■□□□ 1.15
SREBF1-220ENST00000581707 ARP10275 920 aa22.24■■□□□ 1.15
SREBF1-220ENST00000581707 CKBP12277 381 aa22.24■■□□□ 1.15
SREBF1-220ENST00000581707 SELPP16109 830 aa22.24■■□□□ 1.15
SREBF1-220ENST00000581707 RBL2Q08999 1139 aa22.24■■□□□ 1.15
SREBF1-220ENST00000581707 LRRC8DQ7L1W4 858 aa22.24■■□□□ 1.15
SREBF1-220ENST00000581707 ATP6V0A1Q93050 837 aa22.24■■□□□ 1.15
SREBF1-220ENST00000581707 FTOQ9C0B1 505 aaKnown RBP eCLIP22.24■■□□□ 1.15
SREBF1-220ENST00000581707 SEMA6BQ9H3T3 888 aa22.24■■□□□ 1.15
SREBF1-220ENST00000581707 RNPEPQ9H4A4 650 aa22.24■■□□□ 1.15
SREBF1-220ENST00000581707 SH3GLB2Q9NR46 395 aa22.24■■□□□ 1.15
SREBF1-220ENST00000581707 VPS54Q9P1Q0 977 aa22.24■■□□□ 1.15
SREBF1-220ENST00000581707 GRXCR1A8MXD5 290 aa22.23■■□□□ 1.15
SREBF1-220ENST00000581707 DNAJB2P25686 324 aa22.23■■□□□ 1.15
SREBF1-220ENST00000581707 HOXC8P31273 242 aa22.23■■□□□ 1.15
SREBF1-220ENST00000581707 NIPA1Q7RTP0 329 aa22.23■■□□□ 1.15
SREBF1-220ENST00000581707 SDF4Q9BRK5 362 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms