RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 CTSHP09668 335 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 SMIM10L2AP0DMW4 78 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 SMIM10L2BP0DMW5 78 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 GNAT1P11488 350 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 UBA1P22314 1058 aaKnown RBP11.54□□□□□ -0.56
RFFL-208ENST00000581039 NHLH1Q02575 133 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 PGM5Q15124 567 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 ADHFE1Q8IWW8 467 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 FIBCD1Q8N539 461 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 SAMD3Q8N6K7 520 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 ENAHQ8N8S7 591 aaPredicted RBP11.54□□□□□ -0.56
RFFL-208ENST00000581039 APBB2Q92870 758 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 MFSD14AQ96MC6 490 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 RNPEPQ9H4A4 650 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 ZSWIM5Q9P217 1185 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 PCDHA1Q9Y5I3 950 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 SIP14410 1827 aa11.53□□□□□ -0.56
RFFL-208ENST00000581039 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.53□□□□□ -0.56
RFFL-208ENST00000581039 GCOM1H8Y6P7 765 aaPredicted RBP11.53□□□□□ -0.56
RFFL-208ENST00000581039 OPLAHO14841 1288 aa11.53□□□□□ -0.56
RFFL-208ENST00000581039 ZBTB5O15062 677 aa11.53□□□□□ -0.56
RFFL-208ENST00000581039 LGALS2P05162 132 aa11.53□□□□□ -0.56
RFFL-208ENST00000581039 RB1P06400 928 aa11.53□□□□□ -0.56
RFFL-208ENST00000581039 POLR2MP0CAP2 368 aa11.53□□□□□ -0.56
RFFL-208ENST00000581039 SDSP20132 328 aa11.53□□□□□ -0.56
RFFL-208ENST00000581039 CCND2P30279 289 aa11.53□□□□□ -0.56
RFFL-208ENST00000581039 HOXA13P31271 388 aaPredicted RBP11.53□□□□□ -0.56
RFFL-208ENST00000581039 GHRHRQ02643 423 aa11.53□□□□□ -0.56
RFFL-208ENST00000581039 TRAF1Q13077 416 aa11.53□□□□□ -0.56
RFFL-208ENST00000581039 COL19A1Q14993 1142 aa11.53□□□□□ -0.56
RFFL-208ENST00000581039 ZFP91Q96JP5 570 aaPredicted RBP11.53□□□□□ -0.56
RFFL-208ENST00000581039 UBAC1Q9BSL1 405 aa11.53□□□□□ -0.56
RFFL-208ENST00000581039 USP26Q9BXU7 913 aa11.53□□□□□ -0.56
RFFL-208ENST00000581039 KLRF2D3W0D1 207 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 HOXC8P31273 242 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 CTNNB1P35222 781 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 IRS1P35568 1242 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 BMPR1AP36894 532 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 LTBRP36941 435 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 GNPTABQ3T906 1256 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 IFIT1BQ5T764 474 aaKnown RBP11.52□□□□□ -0.57
RFFL-208ENST00000581039 RPAINQ86UA6 219 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 FCHSD1Q86WN1 690 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 STAG2Q8N3U4 1231 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 IL31RAQ8NI17 732 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 GPKOWQ92917 476 aaPredicted RBP eCLIP11.52□□□□□ -0.57
RFFL-208ENST00000581039 POP1Q99575 1024 aaKnown RBP11.52□□□□□ -0.57
RFFL-208ENST00000581039 C11orf84Q9BUA3 381 aaPredicted RBP11.52□□□□□ -0.57
RFFL-208ENST00000581039 OSBPL7Q9BZF2 842 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 KRT23Q9C075 422 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 LMAN2LQ9H0V9 348 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 SETD4Q9NVD3 440 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 RWDD3Q9Y3V2 267 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 KIAA1217Q5T5P2 1943 aa11.52□□□□□ -0.57
RFFL-208ENST00000581039 C5orf67F2Z3F1 127 aa11.51□□□□□ -0.57
RFFL-208ENST00000581039 PPP1R11O60927 126 aaPredicted RBP11.51□□□□□ -0.57
RFFL-208ENST00000581039 NEDD9Q14511 834 aa11.51□□□□□ -0.57
RFFL-208ENST00000581039 SMAD2Q15796 467 aaKnown RBP11.51□□□□□ -0.57
RFFL-208ENST00000581039 CLUL1Q15846 466 aa11.51□□□□□ -0.57
RFFL-208ENST00000581039 IMMTQ16891 758 aaKnown RBP11.51□□□□□ -0.57
RFFL-208ENST00000581039 CTC1Q2NKJ3 1217 aa11.51□□□□□ -0.57
RFFL-208ENST00000581039 FAM26DQ5JW98 314 aa11.51□□□□□ -0.57
RFFL-208ENST00000581039 CWC27Q6UX04 472 aaKnown RBP11.51□□□□□ -0.57
RFFL-208ENST00000581039 METTL7BQ6UX53 244 aa11.51□□□□□ -0.57
RFFL-208ENST00000581039 HFE2Q6ZVN8 426 aa11.51□□□□□ -0.57
RFFL-208ENST00000581039 MTMR8Q96EF0 704 aa11.51□□□□□ -0.57
RFFL-208ENST00000581039 IGFLR1Q9H665 355 aa11.51□□□□□ -0.57
RFFL-208ENST00000581039 BCAS3Q9H6U6 928 aa11.51□□□□□ -0.57
RFFL-208ENST00000581039 CNNM2Q9H8M5 875 aa11.51□□□□□ -0.57
RFFL-208ENST00000581039 ZNF215Q9UL58 517 aaPredicted RBP11.51□□□□□ -0.57
RFFL-208ENST00000581039 MICAL3Q7RTP6 2002 aa11.5□□□□□ -0.57
RFFL-208ENST00000581039 GRM6O15303 877 aa11.5□□□□□ -0.57
RFFL-208ENST00000581039 MBTPS2O43462 519 aa11.5□□□□□ -0.57
RFFL-208ENST00000581039 STAM2O75886 525 aa11.5□□□□□ -0.57
RFFL-208ENST00000581039 ARHGAP4P98171 946 aa11.5□□□□□ -0.57
RFFL-208ENST00000581039 HYAL1Q12794 435 aa11.5□□□□□ -0.57
RFFL-208ENST00000581039 UTP14CQ5TAP6 766 aaKnown RBP11.5□□□□□ -0.57
RFFL-208ENST00000581039 CYFIP1Q7L576 1253 aa11.5□□□□□ -0.57
RFFL-208ENST00000581039 HOMER1Q86YM7 354 aa11.5□□□□□ -0.57
RFFL-208ENST00000581039 RNF135Q8IUD6 432 aa11.5□□□□□ -0.57
RFFL-208ENST00000581039 GPR20Q99678 358 aa11.5□□□□□ -0.57
RFFL-208ENST00000581039 DIAPH3Q9NSV4 1193 aa11.5□□□□□ -0.57
RFFL-208ENST00000581039 MUTYHQ9UIF7 546 aa11.5□□□□□ -0.57
RFFL-208ENST00000581039 MYH7BA7E2Y1 1941 aa11.5□□□□□ -0.57
RFFL-208ENST00000581039 PALM3A6NDB9 673 aaPredicted RBP11.49□□□□□ -0.57
RFFL-208ENST00000581039 SPATA31C2B4DYI2 1134 aa11.49□□□□□ -0.57
RFFL-208ENST00000581039 STXBP3O00186 592 aa11.49□□□□□ -0.57
RFFL-208ENST00000581039 ENPP3O14638 875 aa11.49□□□□□ -0.57
RFFL-208ENST00000581039 CHRNA1P02708 482 aa11.49□□□□□ -0.57
RFFL-208ENST00000581039 ICAM3P32942 547 aa11.49□□□□□ -0.57
RFFL-208ENST00000581039 DLX2Q07687 328 aaPredicted RBP11.49□□□□□ -0.57
RFFL-208ENST00000581039 SMAD4Q13485 552 aaKnown RBP11.49□□□□□ -0.57
RFFL-208ENST00000581039 HDAC1Q13547 482 aaPredicted RBP11.49□□□□□ -0.57
RFFL-208ENST00000581039 BTG3Q14201 252 aaPredicted RBP11.49□□□□□ -0.57
RFFL-208ENST00000581039 HERC4Q5GLZ8 1057 aaPredicted RBP11.49□□□□□ -0.57
RFFL-208ENST00000581039 RSPH3Q86UC2 560 aa11.49□□□□□ -0.57
RFFL-208ENST00000581039 LMBR1Q8WVP7 490 aa11.49□□□□□ -0.57
RFFL-208ENST00000581039 PIGSQ96S52 555 aa11.49□□□□□ -0.57
RFFL-208ENST00000581039 LNPKQ9C0E8 428 aa11.49□□□□□ -0.57
RFFL-208ENST00000581039 RTEL1Q9NZ71 1219 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms