RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 AGO4Q9HCK5 861 aaKnown RBP17.58■□□□□ 0.4
SS18-216ENST00000580751 DDX25Q9UHL0 483 aaKnown RBP17.58■□□□□ 0.4
SS18-216ENST00000580751 NFASCO94856 1347 aa17.57■□□□□ 0.4
SS18-216ENST00000580751 EDIL3O43854 480 aa17.57■□□□□ 0.4
SS18-216ENST00000580751 ZEB2O60315 1214 aa17.57■□□□□ 0.4
SS18-216ENST00000580751 CCNT1O60563 726 aaKnown RBP17.57■□□□□ 0.4
SS18-216ENST00000580751 ARP10275 920 aa17.57■□□□□ 0.4
SS18-216ENST00000580751 PTMSP20962 102 aa17.57■□□□□ 0.4
SS18-216ENST00000580751 GNASQ5JWF2 1037 aa17.57■□□□□ 0.4
SS18-216ENST00000580751 MYSM1Q5VVJ2 828 aa17.57■□□□□ 0.4
SS18-216ENST00000580751 LENG9Q96B70 501 aa17.57■□□□□ 0.4
SS18-216ENST00000580751 SDF4Q9BRK5 362 aa17.57■□□□□ 0.4
SS18-216ENST00000580751 ZNF577Q9BSK1 485 aa17.57■□□□□ 0.4
SS18-216ENST00000580751 TSEN34Q9BSV6 310 aaKnown RBP17.57■□□□□ 0.4
SS18-216ENST00000580751 MOXD2PA6NHM9 499 aa17.56■□□□□ 0.4
SS18-216ENST00000580751 A6NJR5 290 aa17.56■□□□□ 0.4
SS18-216ENST00000580751 GOLGA6L22H0YM25 854 aa17.56■□□□□ 0.4
SS18-216ENST00000580751 IPO5O00410 1097 aaKnown RBP17.56■□□□□ 0.4
SS18-216ENST00000580751 ATP9AO75110 1047 aa17.56■□□□□ 0.4
SS18-216ENST00000580751 FARP2O94887 1054 aaPredicted RBP17.56■□□□□ 0.4
SS18-216ENST00000580751 EN2P19622 333 aaPredicted RBP17.56■□□□□ 0.4
SS18-216ENST00000580751 PTGS1P23219 599 aa17.56■□□□□ 0.4
SS18-216ENST00000580751 ORC2Q13416 577 aaPredicted RBP17.56■□□□□ 0.4
SS18-216ENST00000580751 CSPP1Q1MSJ5 1256 aa17.56■□□□□ 0.4
SS18-216ENST00000580751 KLHDC9Q8NEP7 349 aa17.56■□□□□ 0.4
SS18-216ENST00000580751 PPTC7Q8NI37 304 aa17.56■□□□□ 0.4
SS18-216ENST00000580751 SPATA33Q96N06 139 aa17.56■□□□□ 0.4
SS18-216ENST00000580751 JPH1Q9HDC5 661 aaPredicted RBP17.56■□□□□ 0.4
SS18-216ENST00000580751 PKD2L1Q9P0L9 805 aa17.56■□□□□ 0.4
SS18-216ENST00000580751 TCEAL9Q9UHQ7 104 aa17.56■□□□□ 0.4
SS18-216ENST00000580751 CFAP45Q9UL16 551 aa17.56■□□□□ 0.4
SS18-216ENST00000580751 MYADML2A6NDP7 307 aa17.55■□□□□ 0.4
SS18-216ENST00000580751 NOP56O00567 594 aaKnown RBP17.55■□□□□ 0.4
SS18-216ENST00000580751 CTAGE5O15320 804 aa17.55■□□□□ 0.4
SS18-216ENST00000580751 MSH4O15457 936 aa17.55■□□□□ 0.4
SS18-216ENST00000580751 BAG4O95429 457 aaKnown RBP17.55■□□□□ 0.4
SS18-216ENST00000580751 RILPL1Q5EBL4 403 aa17.55■□□□□ 0.4
SS18-216ENST00000580751 CYFIP1Q7L576 1253 aa17.55■□□□□ 0.4
SS18-216ENST00000580751 AFG1LQ8WV93 481 aa17.55■□□□□ 0.4
SS18-216ENST00000580751 ZNF396Q96N95 335 aaPredicted RBP17.55■□□□□ 0.4
SS18-216ENST00000580751 TBC1D22BQ9NU19 505 aa17.55■□□□□ 0.4
SS18-216ENST00000580751 TBX3O15119 743 aa17.54■□□□□ 0.4
SS18-216ENST00000580751 SLC37A4O43826 429 aa17.54■□□□□ 0.4
SS18-216ENST00000580751 KPNA6O60684 536 aa17.54■□□□□ 0.4
SS18-216ENST00000580751 MMP3P08254 477 aa17.54■□□□□ 0.4
SS18-216ENST00000580751 ATP2B1P20020 1258 aa17.54■□□□□ 0.4
SS18-216ENST00000580751 KRT85P78386 507 aa17.54■□□□□ 0.4
SS18-216ENST00000580751 BEX3Q00994 111 aa17.54■□□□□ 0.4
SS18-216ENST00000580751 ITGB3BPQ13352 177 aaPredicted RBP17.54■□□□□ 0.4
SS18-216ENST00000580751 DGKDQ16760 1214 aa17.54■□□□□ 0.4
SS18-216ENST00000580751 TTC38Q5R3I4 469 aa17.54■□□□□ 0.4
SS18-216ENST00000580751 CCSAPQ6IQ19 270 aaPredicted RBP17.54■□□□□ 0.4
SS18-216ENST00000580751 RIT2Q99578 217 aa17.54■□□□□ 0.4
SS18-216ENST00000580751 SCAND2PQ9GZW5 306 aaPredicted RBP17.54■□□□□ 0.4
SS18-216ENST00000580751 POLR3EQ9NVU0 708 aa17.54■□□□□ 0.4
SS18-216ENST00000580751 SLC9A2Q9UBY0 812 aa17.54■□□□□ 0.4
SS18-216ENST00000580751 PHF24Q9UPV7 400 aa17.54■□□□□ 0.4
SS18-216ENST00000580751 DDX11L8A8MPP1 907 aa17.53■□□□□ 0.4
SS18-216ENST00000580751 SORBS3O60504 671 aa17.53■□□□□ 0.4
SS18-216ENST00000580751 NEMFO60524 1076 aa17.53■□□□□ 0.4
SS18-216ENST00000580751 CABYRO75952 493 aa17.53■□□□□ 0.4
SS18-216ENST00000580751 HOXD8P13378 290 aaPredicted RBP17.53■□□□□ 0.4
SS18-216ENST00000580751 MNX1P50219 401 aaPredicted RBP17.53■□□□□ 0.4
SS18-216ENST00000580751 ACLYP53396 1101 aa17.53■□□□□ 0.4
SS18-216ENST00000580751 KCNA10Q16322 511 aa17.53■□□□□ 0.4
SS18-216ENST00000580751 HSDL1Q3SXM5 330 aa17.53■□□□□ 0.4
SS18-216ENST00000580751 NECAB2Q7Z6G3 386 aa17.53■□□□□ 0.4
SS18-216ENST00000580751 FERMT3Q86UX7 667 aa17.53■□□□□ 0.4
SS18-216ENST00000580751 ETNPPLQ8TBG4 499 aa17.53■□□□□ 0.4
SS18-216ENST00000580751 SLC5A5Q92911 643 aa17.53■□□□□ 0.4
SS18-216ENST00000580751 FAM20AQ96MK3 541 aa17.53■□□□□ 0.4
SS18-216ENST00000580751 KCNMB3Q9NPA1 279 aa17.53■□□□□ 0.4
SS18-216ENST00000580751 MARCH6O60337 910 aa17.52■□□□□ 0.4
SS18-216ENST00000580751 GAS7O60861 476 aa17.52■□□□□ 0.4
SS18-216ENST00000580751 PPFIA4O75335 1185 aa17.52■□□□□ 0.4
SS18-216ENST00000580751 ASGR1P07306 291 aa17.52■□□□□ 0.4
SS18-216ENST00000580751 IRX5P78411 483 aaPredicted RBP17.52■□□□□ 0.4
SS18-216ENST00000580751 KRT76Q01546 638 aa17.52■□□□□ 0.4
SS18-216ENST00000580751 SP4Q02446 784 aa17.52■□□□□ 0.4
SS18-216ENST00000580751 LRCH2Q5VUJ6 765 aa17.52■□□□□ 0.4
SS18-216ENST00000580751 POTEDQ86YR6 584 aa17.52■□□□□ 0.4
SS18-216ENST00000580751 SLFN12Q8IYM2 578 aa17.52■□□□□ 0.4
SS18-216ENST00000580751 DIS3LQ8TF46 1054 aaKnown RBP17.52■□□□□ 0.4
SS18-216ENST00000580751 GLT1D1Q96MS3 346 aa17.52■□□□□ 0.4
SS18-216ENST00000580751 GPR20Q99678 358 aa17.52■□□□□ 0.4
SS18-216ENST00000580751 TEKT3Q9BXF9 490 aa17.52■□□□□ 0.4
SS18-216ENST00000580751 C11orf49Q9H6J7 331 aa17.52■□□□□ 0.4
SS18-216ENST00000580751 BCAS3Q9H6U6 928 aa17.52■□□□□ 0.4
SS18-216ENST00000580751 MORC2Q9Y6X9 1032 aaPredicted RBP17.52■□□□□ 0.4
SS18-216ENST00000580751 DOCK5Q9H7D0 1870 aa17.52■□□□□ 0.39
SS18-216ENST00000580751 ELP1O95163 1332 aa17.51■□□□□ 0.39
SS18-216ENST00000580751 WNT7AO00755 349 aa17.51■□□□□ 0.39
SS18-216ENST00000580751 DHX15O43143 795 aaKnown RBP17.51■□□□□ 0.39
SS18-216ENST00000580751 MYL3P08590 195 aa17.51■□□□□ 0.39
SS18-216ENST00000580751 COL6A1P12109 1028 aa17.51■□□□□ 0.39
SS18-216ENST00000580751 MCM7P33993 719 aa17.51■□□□□ 0.39
SS18-216ENST00000580751 CALCRLQ16602 461 aa17.51■□□□□ 0.39
SS18-216ENST00000580751 FOXD4L5Q5VV16 416 aaPredicted RBP17.51■□□□□ 0.39
SS18-216ENST00000580751 ZNF746Q6NUN9 644 aaPredicted RBP17.51■□□□□ 0.39
SS18-216ENST00000580751 UBE2Q1Q7Z7E8 422 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms